BAC Information

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BAC

Clone NameB6Ng01-073K03
ChromosomeX (Build37)
Map Location 144,000,700 - 144,112,171
singlet/doubletdoublet
Overlap genenone
Upstream geneEG666730, EG245663, Htr2c, Il13ra2, V1rb10, Lrch2
Downstream geneLOC100039462, LOC666789, LOC434863, EG623995, EG624023, LOC666184, LOC100039511, LOC666812, LOC100039519, LOC434864, EG624096, LOC100039545, LOC666837, LOC100039553, LOC100034729, LOC666861, EG666864, LOC434866
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073K03.bB6Ng01-073K03.g
ACCDH890700DH890701
length1,0961,092
definitionDH890700|Mus musculus domesticus DNA, BAC clone: B6Ng01-073K03, 5' end.DH890701|Mus musculus domesticus DNA, BAC clone: B6Ng01-073K03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(144,111,141 - 144,112,171)(144,000,700 - 144,001,801)
sequence
gaattcttgctggcgagatactagctcgggatatggagtaaagctccaac
tttatttttctcacactgcttacttatctctgcaaaatctttcaagtggt
ataaatattacactgtggttactttctattttcatctagtgaataattat
aagtatatgtaagaaaaagcatctcccccgatagcctcccatgatcaact
atttataaattatagataaaatacctaaattattcccaagaacccacaga
catttctaagtaagcaagtttttattagattaacaaggtgtaagcaagca
aggtaatttttttcagccatttctcttactggtagactgtaatttgcagt
tatgaagaaagggtgaattactttattatttatctcagaaattaatccta
caaaactcttaatagaatcactaaacttttatataaaaaacaatcattcc
tttctactttgaatcctcagggtgcacatctattcattaaccatgttttt
agtaaatcatatcaggaatctgaggggggaaagtgggtacaaggaattaa
tcatcacctgatcaccagccctgcttttgaaaaaaaaaggcatgcttttt
tcatagttattctttccaagagtggtggttgaatcattaatctgacccag
tgtgaggagccgcccttgcaatcgccattacaagatggcgctgatatcag
gtgttctaactggtaaacaaatagtctgcacatgtgctagggtatttttc
cattccttgtgccctgcctgtcccatggcgtcatctgggctgatagtgag
cagctaatcaggagctgacatgtcacacagaggggtatttaagcagctcc
attttccgggttcaggtctacctgagaagtaagcaataaagctttgccgt
agaagaatcttattgtccgagtgtgtttgctgatgaaactttacaaggac
aagaagtggcactgatacccgggactatatcatcaccaggcaccgaaagg
agacccctgtttcacacgggcagattcagactacgggacaataagctctg
catgtacatgcagcttgactttctccagcgttagaagctttctgtt
gaattctgattcttattgtgggttaagaggacaggcaagttgaccacatt
cctaataagtgaagtggattatttttctacttcagagagaatatcaatag
gtgacagtgagcagcagttctcacaaatgaatagtgagatattgaaaagg
atgcatggtaagcctgggacacatcgaagttcctcttcaggatatgcatt
taggaagtgttatttcatcccatttgttctaacttgcttatctgtaagct
tggagtgatgcctttcaaatcacatattcttgttctaccaggttttactt
aacacaatcacaagggctggggctgcagctgtttgaaccctggattcaat
cttgaatgtcagcacacacacacacacacacacacacacacacacacaca
cacacacacacacacagagagagagagagagagagagagagagagagaga
gagagagaaagagagagagagagtcaataatgtttgatgtcccttaaaaa
caggagaaacagttgtacaaaatgtcaatgaaatgtaaaaaggcaaaata
acataacataatctcactttatattattgaaaatataactgactgatata
tatgcatacatatatacgtacacacacacatacacacacatatatatact
tgagatacaacccactggttgaacacagatttaactgtcataaggctcag
tatttaaccacagcacaaaaataaataaataaatgattatgttgagacat
caaaaaaaaaaaaggtctaaaagaatatgccctagaatttttcataaaga
gaacataaagggtttcataggaaggggtgcagtaggggattctaacatca
tacaggaggaaaatccaactgtcttccacggataagtcattccacgatct
gcacaacaataattctcatttccttgatctttctttaattagcatacatt
gtaagcactacagtgcgctgcacttcgtgaaagctgagtgaaaaacagta
tcacaacaacagtgtcctgtcatcgaattcatattgtcgaggggagaatg
gctagcacagtgcagatgctgtaatggtcgaggagtataagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_144111141_144112171
seq2: B6Ng01-073K03.b_126_1144 (reverse)

seq1  AACAGAAAGGCTTCTAACGCTGGAGAAAGTTCAAGGCTGCATGTACATTG  50
      |||||||| |||||||||||||||||||| |||| |||||||||||| ||
seq2  AACAGAAA-GCTTCTAACGCTGGAGAAAG-TCAA-GCTGCATGTACA-TG  46

seq1  CAGAGCTGTATTGTCCCGTAGTTCTGAATCTGCCCCGTGTGAAACAGGGG  100
      ||||||| ||||||||||||| |||||||||| ||||||||||||| |||
seq2  CAGAGCT-TATTGTCCCGTAG-TCTGAATCTG-CCCGTGTGAAACA-GGG  92

seq1  GTCTCCTTTCGGTGCCTGGTGATGATATAGTTCCCGGGTTATCAGTGCCA  150
      |||||||||||||||||||||||||||||| ||||||| |||||||||||
seq2  GTCTCCTTTCGGTGCCTGGTGATGATATAG-TCCCGGG-TATCAGTGCCA  140

seq1  CTTCTTGTCCTTGTAAAGTTTCATCAGCAAAACACACTCGGACAATAAGA  200
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTTCTTGTCCTTGTAAAGTTTCATCAGC-AAACACACTCGGACAATAAGA  189

seq1  TTCTTCTACGGCAAAGCTTTATTGCTTACTTCTCAGGTAGACCCTGAACC  250
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTCTTCTACGGCAAAGCTTTATTGCTTACTTCTCAGGTAGA-CCTGAACC  238

seq1  CGGAAAATGGAGCTGCTTAAATACCCCTCTGTGTGACATGTCAGCTCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAAATGGAGCTGCTTAAATACCCCTCTGTGTGACATGTCAGCTCCTG  288

seq1  ATTAGCTGCTCACTATCAGCCCAGATGACGCCATGGGACAGGCAGGGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCTGCTCACTATCAGCCCAGATGACGCCATGGGACAGGCAGGGCAC  338

seq1  AAGGAATGGAAAAATACCCTAGCACATGTGCAGACTATTTGTTTACCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATGGAAAAATACCCTAGCACATGTGCAGACTATTTGTTTACCAGT  388

seq1  TAGAACACCTGATATCAGCGCCATCTTGTAATGGCGATTGCAAGGGCGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACACCTGATATCAGCGCCATCTTGTAATGGCGATTGCAAGGGCGGC  438

seq1  TCCTCACACTGGGTCAGATTAATGATTCAACCACCACTCTTGGAAAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACACTGGGTCAGATTAATGATTCAACCACCACTCTTGGAAAGAAT  488

seq1  AACTATGAAAAAAGCATGCCTTTTTTTTTCAAAAGCAGGGCTGGTGATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGAAAAAAGCATGCCTTTTTTTTTCAAAAGCAGGGCTGGTGATCA  538

seq1  GGTGATGATTAATTCCTTGTACCCACTTTCCCCCCTCAGATTCCTGATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATGATTAATTCCTTGTACCCACTTTCCCCCCTCAGATTCCTGATAT  588

seq1  GATTTACTAAAAACATGGTTAATGAATAGATGTGCACCCTGAGGATTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTACTAAAAACATGGTTAATGAATAGATGTGCACCCTGAGGATTCAA  638

seq1  AGTAGAAAGGAATGATTGTTTTTTATATAAAAGTTTAGTGATTCTATTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAAGGAATGATTGTTTTTTATATAAAAGTTTAGTGATTCTATTAA  688

seq1  GAGTTTTGTAGGATTAATTTCTGAGATAAATAATAAAGTAATTCACCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTGTAGGATTAATTTCTGAGATAAATAATAAAGTAATTCACCCTT  738

seq1  TCTTCATAACTGCAAATTACAGTCTACCAGTAAGAGAAATGGCTGAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATAACTGCAAATTACAGTCTACCAGTAAGAGAAATGGCTGAAAAA  788

seq1  AATTACCTTGCTTGCTTACACCTTGTTAATCTAATAAAAACTTGCTTACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACCTTGCTTGCTTACACCTTGTTAATCTAATAAAAACTTGCTTACT  838

seq1  TAGAAATGTCTGTGGGTTCTTGGGAATAATTTAGGTATTTTATCTATAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATGTCTGTGGGTTCTTGGGAATAATTTAGGTATTTTATCTATAAT  888

seq1  TTATAAATAGTTGATCATGGGAGGCTATCGGGGGAGATGCTTTTTCTTAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATAGTTGATCATGGGAGGCTATCGGGGGAGATGCTTTTTCTTAC  938

seq1  ATATACTTATAATTATTCACTAGATGAAAATAGAAAGTAACCACAGTGTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTTATAATTATTCACTAGATGAAAATAGAAAGTAACCACAGTGTA  988

seq1  ATATTTATACCACTTGAAAGATTTTGCAGAG  1031
      |||||||||||||||||||||||||||||||
seq2  ATATTTATACCACTTGAAAGATTTTGCAGAG  1019

seq1: chrX_144000700_144001801
seq2: B6Ng01-073K03.g_67_1158

seq1  GAATTCTGATTCTTATTGTGGGTTAAGAGGACAGGCAAGTTGACCACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATTCTTATTGTGGGTTAAGAGGACAGGCAAGTTGACCACATT  50

seq1  CCTAATAAGTGAAGTGGATTATTTTTCTACTTCAGAGAGAATATCAATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATAAGTGAAGTGGATTATTTTTCTACTTCAGAGAGAATATCAATAG  100

seq1  GTGACAGTGAGCAGCAGTTCTCACAAATGAATAGTGAGATATTGAAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGTGAGCAGCAGTTCTCACAAATGAATAGTGAGATATTGAAAAGG  150

seq1  ATGCATGGTAAGCCTGGGACACATCGAAGTTCCTCTTCAGGATATGCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGGTAAGCCTGGGACACATCGAAGTTCCTCTTCAGGATATGCATT  200

seq1  TAGGAAGTGTTATTTCATCCCATTTGTTCTAACTTGCTTATCTGTAAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGTGTTATTTCATCCCATTTGTTCTAACTTGCTTATCTGTAAGCT  250

seq1  TGGAGTGATGCCTTTCAAATCACATATTCTTGTTCTACCAGGTTTTACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTGATGCCTTTCAAATCACATATTCTTGTTCTACCAGGTTTTACTT  300

seq1  AACACAATCACAAGGGCTGGGGCTGCAGCTGTTTGAACCCTGGATTCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAATCACAAGGGCTGGGGCTGCAGCTGTTTGAACCCTGGATTCAAT  350

seq1  CTTGAATGTCAGCACACACACACACACACACACACACACACACACACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATGTCAGCACACACACACACACACACACACACACACACACACACA  400

seq1  CACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  450

seq1  GAGAGAGAAAGAGAGAGAGAGAGTCAATAATGTTTGATGTCCCTTAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAAAGAGAGAGAGAGAGTCAATAATGTTTGATGTCCCTTAAAAA  500

seq1  CAGGAGAAACAGTTGTACAAAATGTCAATGAAATGTAAAAAGGCAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAAACAGTTGTACAAAATGTCAATGAAATGTAAAAAGGCAAAATA  550

seq1  ACATAACATAATCTCACTTTATATTATTGAAAATATAACTGACTGATATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACATAATCTCACTTTATATTATTGAAAATATAACTGACTGATATA  600

seq1  TATGCATACATATATACGTACACACACACATACACACACATATATATACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATACATATATACGTACACACACACATACACACACATATATATACT  650

seq1  TGAGATACAACCCACTGGTTGAACACAGATTTAACTGTCATAAGGCTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATACAACCCACTGGTTGAACACAGATTTAACTGTCATAAGGCTCAG  700

seq1  TATTTAACCACAGCACAAAAATAAATAAATAAATGATTATGTTGAGACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAACCACAGCACAAAAATAAATAAATAAATGATTATGTTGAGACAT  750

seq1  CAAAAAAAAAAAAGGTCTAAAAGAATATGCCCTAGAATTTTTCATAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAAAAAAGGTCTAAAAGAATATGCCCTAGAATTTTTCATAAAGA  800

seq1  GAACATAAAGGGTTTCATAGGAAGGGATGCAGTA-GGGATTCTAACATCA  849
      |||||||||||||||||||||||||| ||||||| |||||||||||||||
seq2  GAACATAAAGGGTTTCATAGGAAGGGGTGCAGTAGGGGATTCTAACATCA  850

seq1  TACAGGAGGAAAATCCAACTGTCTTCCACGGATAAGTCATTCCACGATCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGAGGAAAATCCAACTGTCTTCCACGGATAAGTCATTCCACGATCT  900

seq1  GCACAACAATAATTCTCATTTCCTTGATCTTTCCTTTAATTAGCATACAT  949
      |||||||||||||||||||||||||||||||| |||||||||||||||| 
seq2  GCACAACAATAATTCTCATTTCCTTGATCTTT-CTTTAATTAGCATACA-  948

seq1  TTGTAAGCAACTACAGTGCGCTGCACTCCGTGAAAGCTGAGTGAAAAACA  999
      |||||||| |||||||||||||||||| ||||||||||||||||||||||
seq2  TTGTAAGC-ACTACAGTGCGCTGCACTTCGTGAAAGCTGAGTGAAAAACA  997

seq1  GTTATCACAACAACAGTGTTCCTGTCATCGAATTCATATTGTCGAGGGGA  1049
      | |||||||||||||||| |||||||||||||||||||||||||||||||
seq2  G-TATCACAACAACAGTG-TCCTGTCATCGAATTCATATTGTCGAGGGGA  1045

seq1  GAATGGGCTAAGCACAAGTGCAGAATGCTGGGAATTGTCGAGGGAGTATA  1099
      |||| |||| ||||| ||||||| ||||| | ||| ||||| ||||||||
seq2  GAAT-GGCT-AGCAC-AGTGCAG-ATGCT-GTAATGGTCGA-GGAGTATA  1089

seq1  AGG  1102
      |||
seq2  AGG  1092