BAC Information

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BAC

Clone NameB6Ng01-074A07
ChromosomeX (Build37)1 (Build37)
Map Location 111,465,465 - 111,465,92698,865,492 - 98,866,321
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneDach2, LOC237016, EG664945, EG634881, LOC100039201
Downstream geneKlhl4, Gm1866, EG546361, EG237009, 4930524E20Rik, LOC237008, EG664969, EG546362, LOC100039255
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074A07.bB6Ng01-074A07.g
ACCDH890983DH890984
length9241,021
definitionDH890983|Mus musculus domesticus DNA, BAC clone: B6Ng01-074A07, 5' end.DH890984|Mus musculus domesticus DNA, BAC clone: B6Ng01-074A07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(111,465,465 - 111,465,926)(98,865,492 - 98,866,321)
sequence
gaattctccaggagatagaaagagacatcctcaatttcatttgccatacc
caaacataacaaagcaaaacaagttaccaaactgtaaccaaaacaaaaac
aaaagaacccacgacagtgaaaactattcccaacaataaaagaactcctg
ggggaatcaccatcgctgatctcaagctatactatagagcaatagttata
aagaccatatggtattggtacagagacaggcaggtagatcaatggaatag
aattgaagacccagaaatgaacccacatacccatggtcacttgatctttc
tttttttttttattactattagatattttcctcatttaccttttcaatgc
tttctcaaagggcccccctacccaccccccaacccctacctgcctactcc
ccccttttagccctggcgttcccctgtagatcggcatataaaaacccttc
agcccatgggcctctacctgcatgcatgcttctggagccacttttgatac
tggataactattggagtactcccccggtactgagactgtttctttggttc
tccacctttctggtttgccttcagtttagtaccttgggctatttcactag
cgcctgcattggtgatctttcaaaagaaggtaaaatcatccaatggaaaa
aagacagcattttcaaaaaatgatgtgggttaactggtggtctgcatgta
gaagaatgcaaatagatccatttttagccccttgtacatgtttaagtcca
aatggatcaaggacctccatgtaaaaccagatacacttaatctaacagag
gagaaagtgaggaagagccttgaatacatgggtcaggcaaatttttttga
tagaacatcagtggcttatgctgtagataacatagacaaatgggacctca
taagttgaaaagcttttgtaaggt
gaattcacgcagttgaatccttctcaacaatctgttttaatggaacactt
cattacatccgtttcccagctgaagagttctgaattggctggattgaatc
cttctcaacagtctgttttacgggaacacttcattaccaccgttccccag
ctgaagagttctgaattcacgcagttgaatccttctcaacagtctgtttt
acgggaacacttcattaccatgacccgcagttctggttccggaatgaggg
atcttcctttgcgccggtgatggtaaccgtcccaggttttctcatcccag
gatttctcgtcccgggttttctcgtcccgtcccgggttttcttgtcccgg
gatttctcgtcccgggatttctcgtcccaggtcttctcgtcccggttttc
ggcaccaactcttcccgcgtttcggcaccaactcttacccgcgttctcgc
gaccagccaggaagaacgcaacaaaccgtaatcttctgcggcaaagtttt
attgcttacatcttcaggagccagagagcaagagagcaagagcaagaaag
caagaaaaagaacaagaacaagaacaagaaagcaagagagcagtagtgca
agagagcaatagtgcaagagagcaagaaaaagaacaagaacaagaaagca
ggagaaagaacaagaaagcaagagagagaaaaagaacaagaacaagaaag
caagagcaagaaaaagaacaagaacaagaaagagaaagcaagagagagaa
aactagaaagcaagagagagaaagcaagagagagaaaatggcaaaacccc
gtcccttttaaggagaattatcctctgcctaggacgtattactctctgat
tggctgcagcccatcgggccagttgtcatcacgagaaaggcagaacacat
tgcgggaaaactgccctgcacgtgtgcagattatttgtttacacttagaa
cacagctgtcagcgccatcttatatggaaaatgtgagggcggctcctcac
agtaatagtgcttcataaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_111465465_111465926
seq2: B6Ng01-074A07.b_688_944 (reverse)

seq1  TTATGAGGTCCCATTTGTCAATTCTTATCTATTTATTTATTTATTTATTT  50
                                                        
seq2  --------------------------------------------------  0

seq1  ATTTATTTATTTATTTATTTTTGAGACAGGGTTTCTATGTATAATCCTGG  100
                                                        
seq2  --------------------------------------------------  0

seq1  CTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCAAACTAAGAAATC  150
                                                        
seq2  --------------------------------------------------  0

seq1  CTCCTGCCTCTGCCTCCCAAGTGCTGGGATTA-AAGGTATACACCACCAC  199
                                   |||  ||||            
seq2  -----------------------------TTATGAGGT------------  9

seq1  CACCTGCCTCCATTTGTCAATTCTGGATCTTAGAGCATAAGATATTAATG  249
               ||||||||| ||  |  ||| || ||||||||  | | |||
seq2  --------CCCATTTGTCTATGTT--ATC-TACAGCATAAGCCACTGATG  48

seq1  TTCTGTTCATGAAATTTTTCTCTGTGCCCATGTGCTCCAGGCTCTTCCCC  299
      ||||  |||  ||| ||| | |||  |||||||  || |||||||||| |
seq2  TTCT-ATCAAAAAAATTTGC-CTG-ACCCATGTATTCAAGGCTCTTCCTC  95

seq1  ATTTTCTTTTCTATTAGTTTCAGTGTACCTGG-TTTATGTGAAGATCTTT  348
      | |||||  ||| |||| || |||||| |||| ||||  || || || ||
seq2  ACTTTCTCCTCTGTTAGATTAAGTGTATCTGGTTTTACATGGAGGTCCTT  145

seq1  AATCCACTTGGACTTGAGCTTTGTACCAAGACATAAGAATGGCTTGATTC  398
       ||||| |||||||| | |  ||||| | |   ||| ||||| |  ||| 
seq2  GATCCATTTGGACTTAAAC-ATGTACAAGGGGCTAAAAATGGATCTATTT  194

seq1  GCATTCTTCTAAATGCTAACAGCCAGTTGAACCAGCACCATTTGTTGAAA  448
      ||||||||||| ||||  ||  |||||| ||||  || ||||| ||||||
seq2  GCATTCTTCTACATGCAGACCACCAGTT-AACCCACATCATTTTTTGAAA  243

seq1  ATGCTGTCTTTTTT  462
      ||||||||||||||
seq2  ATGCTGTCTTTTTT  257

seq1: chr1_98865492_98866321
seq2: B6Ng01-074A07.g_133_993

seq1  CCCAGCTGAAGAGTTCTGAATTCACGCAGTTGAATCCTTCTCAACAGTCT  50
      ||||||||||||||||||||||  |    |||||||||||||||||||||
seq2  CCCAGCTGAAGAGTTCTGAATTGGCTGGATTGAATCCTTCTCAACAGTCT  50

seq1  GTTTTACGGGAACACTTCATTACCACCGTTCCCCAGCTGAAGAGTTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACGGGAACACTTCATTACCACCGTTCCCCAGCTGAAGAGTTCTGA  100

seq1  ATTCACGCAGTTGAATCCTTCTCAACAGTCTGTTTTACGGGAACACTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACGCAGTTGAATCCTTCTCAACAGTCTGTTTTACGGGAACACTTCA  150

seq1  TTACCATGACCCGCAGTTCTGGTTCCGGAATGAGGGATCTTCC-TTGCGC  199
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTACCATGACCCGCAGTTCTGGTTCCGGAATGAGGGATCTTCCTTTGCGC  200

seq1  CGGTGATGGTAACCGTCCCAGGTTTTCT----------------------  227
      ||||||||||||||||||||||||||||                      
seq2  CGGTGATGGTAACCGTCCCAGGTTTTCTCATCCCAGGATTTCTCGTCCCG  250

seq1  -------------CGTCCCGGGTCTTCTTGTCCCGGGTTTTCTCGTCCCG  264
                   |||||||||| ||||||||||||| ||||||||||||
seq2  GGTTTTCTCGTCCCGTCCCGGGTTTTCTTGTCCCGGGATTTCTCGTCCCG  300

seq1  GGTCTCCTCGTCCCAGGTCTTCTCGTCCCGGGTTTCAGCACCAACTCTTA  314
      ||  | ||||||||||||||||||||||||| |||| |||||||||||| 
seq2  GGATTTCTCGTCCCAGGTCTTCTCGTCCCGGTTTTCGGCACCAACTCTT-  349

seq1  CCCGCGTTTCGGCACCAACTCTTACCCGCGTTCGCGCGACCGGCCAGGAA  364
      ||||||||||||||||||||||||||||||||| ||||||| ||||||||
seq2  CCCGCGTTTCGGCACCAACTCTTACCCGCGTTCTCGCGACCAGCCAGGAA  399

seq1  AGACGCAACAAACCGGAATCTTCTGCGGCAAAAACTTTATTGCTTACATC  414
        ||||||||||||| ||||||||||||| |||  |||||||||||||||
seq2  GAACGCAACAAACCGTAATCTTCTGCGGC-AAAGTTTTATTGCTTACATC  448

seq1  TTCAGGAGCCAGAGAACAAGAGAGCAAGAGTGCAAGAGAGAGCAAGAAAG  464
      ||||||||||||||| ||||||||||            ||||||||||||
seq2  TTCAGGAGCCAGAGAGCAAGAGAGCA------------AGAGCAAGAAAG  486

seq1  CAAGAAAAAGAACAAGAAAGCAAGAGAGAGAAAGCAAGAAAGCA--AGAG  512
      ||||||||||||||||||  |||||   ||||||||||| ||||  || |
seq2  CAAGAAAAAGAACAAGAA--CAAGAACAAGAAAGCAAGAGAGCAGTAGTG  534

seq1  AAAGAACAAGAACAAGAAAGCAAGAGA--AAGAAAAAGAACAAGAACAAG  560
       |||    ||| ||| |  ||||||||  |||||||||||||||||||||
seq2  CAAG----AGAGCAATAGTGCAAGAGAGCAAGAAAAAGAACAAGAACAAG  580

seq1  AAAGCAAGAAAAAGAACAAGAACAAGAAAGCAAGAGAGAGAGAAAAAGAA  610
      |||||| || |      |||||||||||||||  ||||||||||||||||
seq2  AAAGCAGGAGA------AAGAACAAGAAAGCA--AGAGAGAGAAAAAGAA  622

seq1  CAAGAACAAGAA------AGCAAGAAAAAGAACAAGAACA------AGAA  648
      ||||||||||||      ||||||||||||||||||||||      ||||
seq2  CAAGAACAAGAAAGCAAGAGCAAGAAAAAGAACAAGAACAAGAAAGAGAA  672

seq1  AGCAAGAAAAAGAA------AAAGCAAGAACAAGAGAG--AGAGAAAAAG  690
      ||||||| | ||||      |||||||||   ||| ||  ||||| | | 
seq2  AGCAAGAGAGAGAAAACTAGAAAGCAAGAGAGAGAAAGCAAGAGAGAGAA  722

seq1  AATGGCAAAACCCCGTCCCTTTTAAGGAGAATTATCCTCCGCCTAGGACG  740
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AATGGCAAAACCCCGTCCCTTTTAAGGAGAATTATCCTCTGCCTAGGACG  772

seq1  TATTACTCCCTGATTGGCTGCAGCCCATCGGCCCAGTTGTCATCACGAGA  790
      |||||||| |||||||||||||||||||||| ||||||||||||||||||
seq2  TATTACTCTCTGATTGGCTGCAGCCCATCGGGCCAGTTGTCATCACGAGA  822

seq1  AAGGCAGAACACATGGCGGGAAAACTGCCCCTGCACGTGT  830
      |||||||||||||| |||||||||||| ||||||||||||
seq2  AAGGCAGAACACATTGCGGGAAAACTG-CCCTGCACGTGT  861