BAC Information

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BAC

Clone NameB6Ng01-074L12
ChromosomeX (Build37)
Map Location 13,904,900 - 13,905,688
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668990, LOC100043947, LOC100043948, Nyx, LOC675416, Cask, Gpr34, Gpr82, LOC385327, EG385328
Downstream geneLOC668991, 4930403L05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074L12.g
ACCDH891485
length787
definitionDH891485|Mus musculus domesticus DNA, BAC clone: B6Ng01-074L12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatctactggagaacacatctccaaaagtgttccttaacaactg
tattatcactgacacaaatatgactgaaatttgcttaagcaccataatct
taagattctccaaaggtgggaaaggatgagccctgcctgacaccttccta
gataccccatctccatgttatttacctcctacttagcaaagaatattttc
tatgcccattcctaatcttatcagtggtcaaaaaaaattatgctagaaag
cattctctcactgaggttgggaatagttcctgaagcatagtggtctgata
tctgaatataaaagaattatggttatataaaagataaagtaatatggtag
ttgtgaagattatcaatagtcactgctttaaggtctttgagatggtcata
agagtttcaaaccatgaaaaattacaatagaggtgcatctatagagggaa
gtcttagaaatgagtgataagctgaaattagaagggtgaatgagaatttt
acagagagagcacaaagataaacatagtgtataggcctgatactacttgt
attctaaaactaatactggtttctgaaaacctggttgcctcagagacaag
agaatctgcacatagacccacgtagcactatgtgaccttgctcccaagtt
attactgattgttaaatagataccaatagctaggcagaacagacatgtga
gggttaggattccctggctagaggtccgagaagaaccttgggggtcgagt
ggtacggagaagaaggtaaagatgagagacctctcct
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_13904900_13905688
seq2: B6Ng01-074L12.g_67_853

seq1  GAATTCAATCTACTGTAGAACACATAACCAAAAGTATTACTTAACAACTG  50
      ||||||||||||||| |||||||||  |||||||| || |||||||||||
seq2  GAATTCAATCTACTGGAGAACACATCTCCAAAAGTGTTCCTTAACAACTG  50

seq1  TATTATCACTGACACAAATATGACTGAAATTTACTTAAGCACCATAATCT  100
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TATTATCACTGACACAAATATGACTGAAATTTGCTTAAGCACCATAATCT  100

seq1  TAAGATTCTCCAAAGGTGGGAAAGGATGAGCCCTGCCTGACACCTTCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTCTCCAAAGGTGGGAAAGGATGAGCCCTGCCTGACACCTTCCTA  150

seq1  GATACCCCATCTCCATGTTATTTACCTCCTACTTAGCAAAGAATATTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCCCATCTCCATGTTATTTACCTCCTACTTAGCAAAGAATATTTTC  200

seq1  TATGCCCATTCCTAATCTTATCAGTGGTCAAAAAAAATTATGCTAGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCCATTCCTAATCTTATCAGTGGTCAAAAAAAATTATGCTAGAAAG  250

seq1  CATTCTCTCACTGAGGTTGGGAATAGTTCCTGAAGCATAGTGGTCTGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTCACTGAGGTTGGGAATAGTTCCTGAAGCATAGTGGTCTGATA  300

seq1  TCTGAATATAAAAGAATTATGGTTATATAAAAGATAAAGTAATATGGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATATAAAAGAATTATGGTTATATAAAAGATAAAGTAATATGGTAG  350

seq1  TTGTGAAGATTATCAATAGTCACTGCTTTAAGGTCTTTGAGATGGTCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAAGATTATCAATAGTCACTGCTTTAAGGTCTTTGAGATGGTCATA  400

seq1  AGAGTTTCAAACCATGAAAAATTACAATAGAGGTGCATCTATAGAGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTCAAACCATGAAAAATTACAATAGAGGTGCATCTATAGAGGGAA  450

seq1  GTCTTAGAAATGAGTGATAAGCTGAAATTAGAAGGGTGAATGAGAATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGAAATGAGTGATAAGCTGAAATTAGAAGGGTGAATGAGAATTTT  500

seq1  ACAGAGAGAGCAGAAAGATAAACATAGTGTATAGGCCTGATACTACTTGT  550
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGAGCACAAAGATAAACATAGTGTATAGGCCTGATACTACTTGT  550

seq1  ATTCTAAAACTAATACTGGTTTCTGAAAACCTGGTTGCCTCAGAGACAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAAACTAATACTGGTTTCTGAAAACCTGGTTGCCTCAGAGACAAG  600

seq1  AGAATCTGCACATAGACCCACGTAGCACTATGTGACCTTGCTCCCAAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTGCACATAGACCCACGTAGCACTATGTGACCTTGCTCCCAAGTT  650

seq1  ATTACTGATTGTTAAATAGATACCAATAGCTAGGCAGAACAGACATGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATTACTGATTGTTAAATAGATACCAATAGCTAGGCAGAACAGACATGTGA  700

seq1  GGGTTAGGATTCCCTGGCTAGAGGTCAGAGAAGAACCATGGGGGTCGAGT  750
      |||||||||||||||||||||||||| |||||||||| ||||||||||||
seq2  GGGTTAGGATTCCCTGGCTAGAGGTCCGAGAAGAACCTTGGGGGTCGAGT  750

seq1  GGTAGGGAGAAGAAGGTAAAGGATGAGAGAGAGTCTCCT  789
      |||| ||||||||||||||| |||||||||   ||||||
seq2  GGTACGGAGAAGAAGGTAAA-GATGAGAGA-CCTCTCCT  787