BAC Information

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BAC

Clone NameB6Ng01-075C22
ChromosomeX (Build37)
Map Location 41,157,829 - 41,295,800
singlet/doubletdoublet
Overlap genenone
Upstream geneOdz1, Gm362, LOC100039977, LOC100039987
Downstream geneLOC637141, Wdr40c, Wdr40b, LOC665585
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075C22.bB6Ng01-075C22.g
ACCDH891812DH891813
length1,0501,127
definitionDH891812|Mus musculus domesticus DNA, BAC clone: B6Ng01-075C22, 5' end.DH891813|Mus musculus domesticus DNA, BAC clone: B6Ng01-075C22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,157,829 - 41,158,621)(41,294,678 - 41,295,800)
sequence
gaattctttttatatttgttgagatgatcatgttatttctgttaatgaga
ttagcatatttgatgaaggtcatttattgatttattttgagccatcccaa
tatttttagaatggatccaaatttctcatgatggatatcttggtatgtac
ttggatttgatttgcgaagtattttattgagaatttgtgctgcatctatg
ttcacttttatgtaattcttttattagtggtgtcctgtagtttttagtaa
gctgtacttgcattaccttttaactacaattaattttatttactgccata
cccactccagtgaaatctgcctgacaagcccaaaagcttggctgaagtcc
tgaggcaaaaagtttcactgacactagtttcctggaagttctttggcatc
ccttaacacagatgtgtttaagatttgtccctgagagttttgtgtgggtt
tcttcagtattgttttactataagtgcctccaaggaatgatttgacatat
agctaagttagactggcctccaccaatgttccaatatcctaggaaattgt
tgagccagccttgggctttgaatattctaagaatgctactcattcagagg
aaaagcctccagtgttgacagagagatagtgaaagaaatcaggcattgca
gtttactggataagagctaaaaatctcagggctagtttaacaaagtaaac
ttagaattcttattacagtcatgtatagcagactacatttcatattaaca
gaaagatggtgagttcttttgtttattggagcttctctaccgatacttaa
aataacaactaagttactcccatatacaggaatttacaatggtctaggaa
gaaggtgggttgtggtctaagaaggaactagatagagtaaatatttaaaa
taatatctgagtcactcgcatatacaggaatttacaatggtctaaggaga
gatggattatacaataggctagaaatggaactatgacagggcatactgtc
ctgagttctagaataagctgactttagctagggctgatttttatccagtt

gaattctaggcaaatcagtgaactctattaccgagtgaccatacattaaa
aaattattgtgaaaagaatcaagaaagagagatattgaagtcagtcatca
tgaatgtataggcttcatgaacacccaatatatttgtacataagcatcaa
ctcatacataaactaaaacagaggattaaaaagaataatatcttgaaatt
tggggaaaggtggatgaactttagaatgctacatataataagtcagagat
gtgtaactattgcagcataataaaattgtgacttgtaggaactggtgatg
tggacaaagaagaagaaggactggacattgtagtcattggaataagaaac
agccttcattcattgctgcagggttttgaatacctggtctcattcagtgg
tgttctttggaggtgtttttcaggatcatagagacttggtagaatacatt
actaggggtgggctttgagggtagctttataacctttcctccatttcttt
tttcattcatgataagccatatttgagatcctctagccctgatatgctct
cctcaacattgtggactttagccctctagaaatgtaactcaaaaaatttt
cttccttaagctgtttttctcatgttatgatttcatagcaacaaaaagta
gcaaaaaagaggtgagcaattatatatatatggaaatgtacactaaatcc
cactaatctgggggagaaaggaaaaatactcttagataaatacaatttat
agaattagacattgccttgtaaatatagtgtcactaaatagtagggctca
atacaaaataattgttgaggttatttttctatatatccataattgtcttt
aactatccacagatatttaatgtttaaacttcgtatgatttcatattttg
cttcagaggaaatattattttggtttatagcaaatctaaatattttattt
gatcagtaatgccttgaaaaatgaatcacactagtctttctttttgtttt
ttaagctgtattttaaaaacaggtgaacattaaattttaattccatggtg
tcttaattatttacagggaattttcagtaaaagaaagaaattagaacttc
agttccttttgtaacttggcctttatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_41157829_41158621
seq2: B6Ng01-075C22.b_44_836

seq1  GAATTCTTTTTATATTTGTTGAGATGATCATGTTATTTCTGTTAATGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTATATTTGTTGAGATGATCATGTTATTTCTGTTAATGAGA  50

seq1  TTAGCATATTTGATGAAGGTCATTTATTGATTTATTTTGAGCCATCCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATATTTGATGAAGGTCATTTATTGATTTATTTTGAGCCATCCCAA  100

seq1  TATTTTTAGAATGGATCCAAATTTCTCATGATGGATATCTTGGTATGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAGAATGGATCCAAATTTCTCATGATGGATATCTTGGTATGTAC  150

seq1  TTGGATTTGATTTGCGAAGTATTTTATTGAGAATTTGTGCTGCATCTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTTGATTTGCGAAGTATTTTATTGAGAATTTGTGCTGCATCTATG  200

seq1  TTCACTTTTATGTAATTCTTTTATTAGTGGTGTCCTGTAGTTTTTAGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTTTATGTAATTCTTTTATTAGTGGTGTCCTGTAGTTTTTAGTAA  250

seq1  GCTGTACTTGCATTACCTTTTAACTACAATTAATTTTATTTACTGCCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTACTTGCATTACCTTTTAACTACAATTAATTTTATTTACTGCCATA  300

seq1  CCCACTCCAGTGAAATCTGCCTGACAAGCCCAAAAGCTTGGCTGAAGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCCAGTGAAATCTGCCTGACAAGCCCAAAAGCTTGGCTGAAGTCC  350

seq1  TGAGGCAAAAAGTTTCACTGACACTAGTTTCCTGGAAGTTCTTTGGCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAAAAAGTTTCACTGACACTAGTTTCCTGGAAGTTCTTTGGCATC  400

seq1  CCTTAACACAGATGTGTTTAAGATTTGTCCCTGAGAGTTTTGTGTGGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAACACAGATGTGTTTAAGATTTGTCCCTGAGAGTTTTGTGTGGGTT  450

seq1  TCTTCAGTATTGTTTTACTATAAGTGCCTCCAAGGAATGATTTGACATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGTATTGTTTTACTATAAGTGCCTCCAAGGAATGATTTGACATAT  500

seq1  AGCTAAGTTAGACTGGCCTCCACCAATGTTCCAATATCCTAGGAAATTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGTTAGACTGGCCTCCACCAATGTTCCAATATCCTAGGAAATTGT  550

seq1  TGAGCCAGCCTTGGGCTTTGAATATTCTAAGAATGCTACTCATTCAGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCAGCCTTGGGCTTTGAATATTCTAAGAATGCTACTCATTCAGAGG  600

seq1  AAAAGCCTCCAGTGTTGACAGAGAGATAGTGAAAGAAATCAGGCATTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCTCCAGTGTTGACAGAGAGATAGTGAAAGAAATCAGGCATTGCA  650

seq1  GTTTACTGGATAAGAGCTAAAAATCTCAGGGCTAGTTTAACAAAGTAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTGGATAAGAGCTAAAAATCTCAGGGCTAGTTTAACAAAGTAAAC  700

seq1  TTAGAATTCTTATTACAGTCATGTATAGCAGACTACATTTCATATTAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATTCTTATTACAGTCATGTATAGCAGACTACATTTCATATTAACA  750

seq1  GAAAGATGGTGAGTTCTTTTGTTTATTGGAGCTTCTCTACCGA  793
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATGGTGAGTTCTTTTGTTTATTGGAGCTTCTCTACCGA  793

seq1: chrX_41294678_41295800
seq2: B6Ng01-075C22.g_67_1193 (reverse)

seq1  AATAAAGG-CAAGGTACAAAAGGAACTGAAGTTCTAATT--CTTCTTTTA  47
      |||||||| |||| |||||||||||||||||||||||||   ||||||||
seq2  AATAAAGGCCAAGTTACAAAAGGAACTGAAGTTCTAATTTCTTTCTTTTA  50

seq1  CTGAAAA-TCCCTGTAAATAATTTAGACA-CATTGAATTAAAAATTTAAT  95
      ||||||| ||||||||||||||| ||||| ||| ||||| ||||||||||
seq2  CTGAAAATTCCCTGTAAATAATTAAGACACCATGGAATT-AAAATTTAAT  99

seq1  GTTCAACCTGTTTTTAAAATACAGCTTAAAATACAAAA--GAAGACTAGT  143
      |||| |||||||||||||||||||||||||| ||||||   |||||||||
seq2  GTTC-ACCTGTTTTTAAAATACAGCTTAAAAAACAAAAAGAAAGACTAGT  148

seq1  GTGATTCATTTTATCAAGGCATTACTGATCAAATAAAATATTTAGATTTG  193
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTGATTCATTTT-TCAAGGCATTACTGATCAAATAAAATATTTAGATTTG  197

seq1  CTATAAACCAAAATAATATTTCCTCTGAAGCAAAATATGAAATCATACGA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAACCAAAATAATATTTCCTCTGAAGCAAAATATGAAATCATACGA  247

seq1  AGTTTAAACATTAAATATCTGTGGATAGTTAAAGACAATTATGGATATAT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAAACATTAAATATCTGTGGATAGTTAAAGACAATTATGGATATAT  297

seq1  AGAAAAATAACCTCAACAATTATTTTGTATTGAGCCCTACTATTTAGTGA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATAACCTCAACAATTATTTTGTATTGAGCCCTACTATTTAGTGA  347

seq1  CACTATATTTACAAGGCAATGTCTAATTCTATAAATTGTATTTATCTAAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATATTTACAAGGCAATGTCTAATTCTATAAATTGTATTTATCTAAG  397

seq1  AGTATTTTTCCTTTCTCCCCCAGATTAGTGGGATTTAGTGTACATTTCCA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTTTCCTTTCTCCCCCAGATTAGTGGGATTTAGTGTACATTTCCA  447

seq1  TATATATATAATTGCTCACCTCTTTTTTGCTACTTTTTGTTGCTATGAAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATAATTGCTCACCTCTTTTTTGCTACTTTTTGTTGCTATGAAA  497

seq1  TCATAACATGAGAAAAACAGCTTAAGGAAGAAAATTTTTTGAGTTACATT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAACATGAGAAAAACAGCTTAAGGAAGAAAATTTTTTGAGTTACATT  547

seq1  TCTAGAGGGCTAAAGTCCACAATGTTGAGGAGAGCATATCAGGGCTAGAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGGGCTAAAGTCCACAATGTTGAGGAGAGCATATCAGGGCTAGAG  597

seq1  GATCTCAAATATGGCTTATCATGAATGAAAAAAGAAATGGAGGAAAGGTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCAAATATGGCTTATCATGAATGAAAAAAGAAATGGAGGAAAGGTT  647

seq1  ATAAAGCTACCCTCAAAGCCCACCCCTAGTAATGTATTCTACCAAGTCTC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGCTACCCTCAAAGCCCACCCCTAGTAATGTATTCTACCAAGTCTC  697

seq1  TATGATCCTGAAAAACACCTCCAAAGAACACCACTGAATGAGACCAGGTA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATCCTGAAAAACACCTCCAAAGAACACCACTGAATGAGACCAGGTA  747

seq1  TTCAAAACCCTGCAGCAATGAATGAAGGCTGTTTCTTATTCCAATGACTA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAACCCTGCAGCAATGAATGAAGGCTGTTTCTTATTCCAATGACTA  797

seq1  CAATGTCCAGTCCTTCTTCTTCTTTGTCCACATCACCAGTTCCTACAAGT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCCAGTCCTTCTTCTTCTTTGTCCACATCACCAGTTCCTACAAGT  847

seq1  CACAATTTTATTATGCTGCAATAGTTACACATCTCTGACTTATTATATGT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATTTTATTATGCTGCAATAGTTACACATCTCTGACTTATTATATGT  897

seq1  AGCATTCTAAAGTTCATCCACCTTTCCCCAAATTTCAAGATATTATTCTT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCTAAAGTTCATCCACCTTTCCCCAAATTTCAAGATATTATTCTT  947

seq1  TTTAATCCTCTGTTTTAGTTTATGTATGAGTTGATGCTTATGTACAAATA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCCTCTGTTTTAGTTTATGTATGAGTTGATGCTTATGTACAAATA  997

seq1  TATTGGGTGTTCATGAAGCCTATACATTCATGATGACTGACTTCAATATC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGGTGTTCATGAAGCCTATACATTCATGATGACTGACTTCAATATC  1047

seq1  TCTCTTTCTTGATTCTTTTCACAATAATTTTTTAATGTATGGTCACTCGG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCTTGATTCTTTTCACAATAATTTTTTAATGTATGGTCACTCGG  1097

seq1  TAATAGAGTTCACTGATTTGCCTAGAATTC  1123
      ||||||||||||||||||||||||||||||
seq2  TAATAGAGTTCACTGATTTGCCTAGAATTC  1127