BAC Information

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BAC

Clone NameB6Ng01-075O03
ChromosomeX (Build37)
Map Location 145,980,953 - 146,079,713
singlet/doubletdoublet
Overlap geneLOC382243
Upstream geneLOC666861, EG666864, LOC434866, EG666868, EG624260, LOC434865, EG624310, Ott, LOC666888, LOC100039598, LOC100039890, LOC100039612, EG666923, EG624378, LOC100039934, LOC100039629
Downstream geneEG666961, EG666968, OTTMUSG00000018988, LOC100039651, EG624568, LOC382244, LOC100039669, EG666982, EG624631, EG546387, LOC333588, Tmem29, LOC100040101, Alas2, Apex2, Pfkfb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075O03.bB6Ng01-075O03.g
ACCDH892315DH892316
length1,0721,141
definitionDH892315|Mus musculus domesticus DNA, BAC clone: B6Ng01-075O03, 5' end.DH892316|Mus musculus domesticus DNA, BAC clone: B6Ng01-075O03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,078,640 - 146,079,713)(145,980,953 - 145,982,087)
sequence
gaattctttgtttagctctgtacctcatttttaaatggggttatttgatt
ttctggagtctagcttcacaaaagaagtcacttgatatgcactcaggaat
tgtacagactagtgattgttactctgttctgggtctctacagtggagttg
gattgttccagagaacatccactcctttatcatgggttgtagagggagaa
tatatgtgcagctcagttgagcagtgtccaactgagctgtagagtgtgag
cagtggagaaacttattgatggacatgggaccacttgtcattgaagctac
tctctattactctaaatgggaagtcaggcaggtccactcttgacgcctac
cacagactgagactgacactggaaaaaaaagtatcttcatagtttggctc
aaatttagggagtaaaaattatctcaattttcttttgtctctagcacctt
taggatgtatagaaaagacaacacagatttggggaaatggctcagttggc
caagtacttgccagtaagtgtaaggatccaagttgcacccagggccccat
taagataagccatgatctgtggctgtgagccaaaagtacccaggtccttt
atggcagagtggttttccatcttatctttttcctccaccccaactcctgc
cttggaaatacggttttttttttgtttgtttgtttgtttgttttgttttg
ttttttttgttttttcttgatcagccattctagctttttctgcaatttga
agtctgtaatcgattacttgaggacagaagatcctcaaaatcctctggac
gttcttctgaacgttgctatcatctaatatcagtagtgtctaatttcaaa
tgcttaatgtgtgtgtggagagatggctgacaaacctgaagcttggtggt
agatgggagaacttacccatgtatgatgtgtgagtcatgtgttcagtcac
agcacctttggtgggacacacaggtgtagctttaaatgtttgtggagttt
ccactccacagggagcagacagctaggctcattagaagatgacattttcc
aaatacaggtgtattgcagagg
gaattcagcatagcaacacagtattggcttattcaaacatcagcagaaga
attacatgtacgtgcagggtgtcagagttctgtgagtagttgactcagtt
tagatagccctgttatgtcctcacattcctctttatctttaaggttaagc
tgttcccaggattgttttaactatggggcacacctgggtttggttttctt
tttcctcagccccaggcagcctctaggctcacaaactactagcaatttct
gagtactttgtattatgtgacttacaggtcttggaatttcatctttcttt
caatcctatttttttctcacctctgacaccataaagttaagaacattggg
agggctgtttcctcaaacaacatgcattgattcccagcacatgtctcaca
acaatcgattgcaggaaaattgagccctcttctggactgcacatccatca
ggcacacacttgagtcacaggtaacacggaggcaaaataaccaaaaagat
gaactgagaaatcaaaatgaaatgaaataaaacaaattgagattagtgtg
aacagaattatttagagcccgttagtaatgatcaggatttccctagtata
caacagagaatacatttaaggagctagtagaaaagcttgtggcatgatga
agttcttccaggttttttgtttgttgttgttgttttgtttttttgttttt
ttgttcccatgcctttttttctcactgtaattttcatcttgtaaaactgg
caatgttttcattacattcatacagatgccgaaggtgaatcagagccatc
tcatatagcagatatatttagatttaaatgtagatttcacatcaacaaat
ttttgtctcagacaatatataggatatatttgtactaaaattattcacca
tttacatgtacttcaaatttaatgagcacttatattttatcagacagcct
atgtggtatccaattcagttcatggggattggttggatacccactgtgag
tgggcagcctgcgcaaagcagtgctccttaaatgggatactaagggctag
cagcagcagcagcagaacctgaaacttggggccaatatatagattctcat
tcatcacagccagaagagaccaaaggaatactcataaacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_146078640_146079713
seq2: B6Ng01-075O03.b_47_1118 (reverse)

seq1  CATCTGCAATACAACTGTATTTGG-AAATGTCATCTTCTTACTGAGCTTA  49
      | ||||||||||| |||||||||| ||||||||||||| || ||||| ||
seq2  CCTCTGCAATACACCTGTATTTGGAAAATGTCATCTTC-TAATGAGCCTA  49

seq1  GCTGTCTGCTCCCTGTGGAGTGGAAACTCCACAAACATTTTAAAGCTACA  99
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GCTGTCTGCTCCCTGTGGAGTGGAAACTCCACAAACA-TTTAAAGCTACA  98

seq1  CCTGTGTGTCCCACCAAAGGTGCTGGTGACTGAACACATGACTCACACAT  149
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CCTGTGTGTCCCACCAAAGGTGCT-GTGACTGAACACATGACTCACACAT  147

seq1  CATACATGGGTAAGTTCTCCCATCTACCACCAAGCTTCAGGTTTGTCAGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATGGGTAAGTTCTCCCATCTACCACCAAGCTTCAGGTTTGTCAGC  197

seq1  CATCTCTCCACACACACATTAAGCATTTGAAATTAGACACTACTGATATT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTCCACACACACATTAAGCATTTGAAATTAGACACTACTGATATT  247

seq1  AGATGATAGCAACGTTCAGAAGAACGTCCAGAGGATTTTGAGGATCTTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATAGCAACGTTCAGAAGAACGTCCAGAGGATTTTGAGGATCTTCT  297

seq1  GTCCTCAAGTAATCGATTACAGACTTCAAATTGCAGAAAAAGCTAGAATG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCAAGTAATCGATTACAGACTTCAAATTGCAGAAAAAGCTAGAATG  347

seq1  GCTGATCAAGAAAAAACAAAAAAAACAAAACAAAACAAACAAACAAACAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATCAAGAAAAAACAAAAAAAACAAAACAAAACAAACAAACAAACAA  397

seq1  ACAAAAAAAAAACCGTATTTCCAAGGCAGGAGTTGGGGTGGAGGAAAAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAAAAACCGTATTTCCAAGGCAGGAGTTGGGGTGGAGGAAAAAG  447

seq1  ATAAGATGGAAAACCACTCTGCCATAAAGGACCTGGGTACTTTTGGCTCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATGGAAAACCACTCTGCCATAAAGGACCTGGGTACTTTTGGCTCA  497

seq1  CAGCCACAGATCATGGCTTATCTTAATGGGGCCCTGGGTGCAACTTGGAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACAGATCATGGCTTATCTTAATGGGGCCCTGGGTGCAACTTGGAT  547

seq1  CCTTACACTTACTGGCAAGTACTTGGCCAACTGAGCCATTTCCCCAAATC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACACTTACTGGCAAGTACTTGGCCAACTGAGCCATTTCCCCAAATC  597

seq1  TGTGTTGTCTTTTCTATACATCCTAAAGGTGCTAGAGACAAAAGAAAATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGTCTTTTCTATACATCCTAAAGGTGCTAGAGACAAAAGAAAATT  647

seq1  GAGATAATTTTTACTCCCTAAATTTGAGCCAAACTATGAAGATACTTTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAATTTTTACTCCCTAAATTTGAGCCAAACTATGAAGATACTTTTT  697

seq1  TTTCCAGTGTCAGTCTCAGTCTGTGGTAGGCGTCAAGAGTGGACCTGCCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGTGTCAGTCTCAGTCTGTGGTAGGCGTCAAGAGTGGACCTGCCT  747

seq1  GACTTCCCATTTAGAGTAATAGAGAGTAGCTTCAATGACAAGTGGTCCCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCCATTTAGAGTAATAGAGAGTAGCTTCAATGACAAGTGGTCCCA  797

seq1  TGTCCATCAATAAGTTTCTCCACTGCTCACACTCTACAGCTCAGTTGGAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATCAATAAGTTTCTCCACTGCTCACACTCTACAGCTCAGTTGGAC  847

seq1  ACTGCTCAACTGAGCTGCACATATATTCTCCCTCTACAACCCATGATAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCAACTGAGCTGCACATATATTCTCCCTCTACAACCCATGATAAA  897

seq1  GGAGTGGATGTTCTCTGGAACAATCCAACTCCACTGTAGAGACCCAGAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGGATGTTCTCTGGAACAATCCAACTCCACTGTAGAGACCCAGAAC  947

seq1  AGAGTAACAATCACTAGTCTGTACAATTCCTGAGTGCATATCAAGTGACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAACAATCACTAGTCTGTACAATTCCTGAGTGCATATCAAGTGACT  997

seq1  TCTTTTGTGAAGCTAGACTCCAGAAAATCAAATAACCCCATTTAAAAATG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGTGAAGCTAGACTCCAGAAAATCAAATAACCCCATTTAAAAATG  1047

seq1  AGGTACAGAGCTAAACAAAGAATTC  1074
      |||||||||||||||||||||||||
seq2  AGGTACAGAGCTAAACAAAGAATTC  1072

seq1: chrX_145980953_145982087
seq2: B6Ng01-075O03.g_69_1209

seq1  GAATTCAGCATAGCAACACAGTATTGGCTTATTCAAACATCAGCAGAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATAGCAACACAGTATTGGCTTATTCAAACATCAGCAGAAGA  50

seq1  ATTACATGTACGTGCAGGGTGTCAGAGTTCTGTGAGTAGTTGACTCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATGTACGTGCAGGGTGTCAGAGTTCTGTGAGTAGTTGACTCAGTT  100

seq1  TAGATAGCCCTGTTATGTCCTCACATTCCTCTTTATCTTTAAGGTTAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGCCCTGTTATGTCCTCACATTCCTCTTTATCTTTAAGGTTAAGC  150

seq1  TGTTCCCAGGATTGTTTTAACTATGGGGCACACCTGGGTTTGGTTTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCAGGATTGTTTTAACTATGGGGCACACCTGGGTTTGGTTTTCTT  200

seq1  TTTCCTCAGCCCCAGGCAGCCTCTAGGCTCACAAACTACTAGCAATTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCAGCCCCAGGCAGCCTCTAGGCTCACAAACTACTAGCAATTTCT  250

seq1  GAGTACTTTGTATTATGTGACTTACAGGTCTTGGAATTTCATCTTTCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACTTTGTATTATGTGACTTACAGGTCTTGGAATTTCATCTTTCTTT  300

seq1  CAATCCTATTTTTTTCTCACCTCTGACACCATAAAGTTAAGAACATTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTATTTTTTTCTCACCTCTGACACCATAAAGTTAAGAACATTGGG  350

seq1  AGGGCTGTTTCCTCAAACAACATGCATTGATTCCCAGCACATGTCTCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGTTTCCTCAAACAACATGCATTGATTCCCAGCACATGTCTCACA  400

seq1  ACAATCGATTGCAGGAAAATTGAGCCCTCTTCTGGACTGCACATCCATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCGATTGCAGGAAAATTGAGCCCTCTTCTGGACTGCACATCCATCA  450

seq1  GGCACACACTTGAGTCACAGGTAACACGGAGGCAAAATAACCAAAAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACACACTTGAGTCACAGGTAACACGGAGGCAAAATAACCAAAAAGAT  500

seq1  GAACTGAGAAATCAAAATGAAATGAAATAAAACAAATTGAGATTAGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGAGAAATCAAAATGAAATGAAATAAAACAAATTGAGATTAGTGTG  550

seq1  AACAGAATTATTTAGAGCCCGTTAGTAATGATCAGGATTTCCCTAGTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAATTATTTAGAGCCCGTTAGTAATGATCAGGATTTCCCTAGTATA  600

seq1  CAACAGAGAATACATTTAAGGAGCTAGTAGAAAAGCTTGTGGCATGATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAGAATACATTTAAGGAGCTAGTAGAAAAGCTTGTGGCATGATGA  650

seq1  AGTTCTTCCAGGTTTTTTGTTTGTTGTTGTTGTTTTGTTTTTTTGTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTCCAGGTTTTTTGTTTGTTGTTGTTGTTTTGTTTTTTTGTTTTT  700

seq1  TTGTTCCCATGCCTTTTTTTCTCACTGTAATTTTCATCTTGTAAAACTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCCATGCCTTTTTTTCTCACTGTAATTTTCATCTTGTAAAACTGG  750

seq1  CAATGTTTTCATTACATTCATACAGATGCCGAAGGTGAATCAGAGCCATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTTTCATTACATTCATACAGATGCCGAAGGTGAATCAGAGCCATC  800

seq1  TCATATAGCAGATATATTTAGATTTAAATGTAGATTTCACATCAACAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAGCAGATATATTTAGATTTAAATGTAGATTTCACATCAACAAAT  850

seq1  TTTTGTCTCAGACAATATATAGGATATATTTGTACTAAAATTATTCACCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTCAGACAATATATAGGATATATTTGTACTAAAATTATTCACCA  900

seq1  TTTACATGTACTTCAAATTTAATGAGCACTTATATTTTATCAGACAAGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTTACATGTACTTCAAATTTAATGAGCACTTATATTTTATCAGAC-AGCC  949

seq1  TATGTGGTATCCAATTCAGTTCATGGGGATTGGTTGGATACCCACTGTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGTATCCAATTCAGTTCATGGGGATTGGTTGGATACCCACTGTGA  999

seq1  GTGGGCAGCCTGCGCAAAGCAGTGCTCCTTAAATGGGAATACT-AGGGCT  1049
      ||||||||||||||||||||||||||||||||||||| ||||| ||||||
seq2  GTGGGCAGCCTGCGCAAAGCAGTGCTCCTTAAATGGG-ATACTAAGGGCT  1048

seq1  AGCAGCAGCAGCAGCAGAACCTGAAACTTGGGGCCA--ATATAGATTCTC  1097
      ||||||||||||||||||||||||||||||||||||  ||||||||||||
seq2  AGCAGCAGCAGCAGCAGAACCTGAAACTTGGGGCCAATATATAGATTCTC  1098

seq1  ATTCATCACAG-CAGAAGAG-CCAAAGGAATAC---TAAACTA  1135
      ||||||||||| |||||||| ||||||||||||   |||||||
seq2  ATTCATCACAGCCAGAAGAGACCAAAGGAATACTCATAAACTA  1141