This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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BAC name
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search by nearby gene name.
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Search Result
BAC
Clone Name
B6Ng01-082I10
Chromosome
X (Build37)
Map Location
80,011,219 - 80,160,536
singlet/doublet
doublet
Overlap gene
none
Upstream gene
EG667799
,
EG629310
Downstream gene
Dmd
,
Tsga8
Link
Open Mouse BAC browser
Click to get alignment info.
name
EG667799
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:667799
MGI:3648640
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 626 ESTs, 21 Proteins
pseudo
: _no_value
name
EG629310
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:629310
MGI:3647741
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins
pseudo
: _no_value
name
Dmd
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:13405
MGI:94909
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Tsga8
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:60600
MGI:1194903
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 1 Protein
name
Dmd
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:142357345
GeneID:13405
MGI:94909
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: dystrophin, muscular dystrophy
transcript_id
: NM_007868.2
name
Dmd
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:6681203
GeneID:13405
MGI:94909
definition
GO_component
: GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005626 - insoluble fraction [Evidence IDA]; GO:0005792 - microsome [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0042383 - sarcolemma [Evidence IDA] [Evidence TAS]; GO:0045202 - synapse [Evidence IDA]
GO_function
: GO:0003779 - actin binding [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005198 - structural molecule activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO_process
: GO:0007517 - muscle development [Evidence IMP]; GO:0007519 - striated muscle development [Evidence IMP] [Evidence IGI]
codon_start
: 1
note
: Duchenne muscular dystrophy; X-linked muscular dystrophy; dystrophin Dp71
product
: dystrophin, muscular dystrophy
protein_id
: NP_031894.1
name
EG667799
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:667799
definition
number
: 1
pseudo
: _no_value
name
EG629310
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:629310
definition
number
: 3
pseudo
: _no_value
name
EG629310
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:629310
definition
number
: 2
pseudo
: _no_value
name
EG629310
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:629310
definition
number
: 1
pseudo
: _no_value
name
Tsga8
(CDS detail)
type
misc_RNA
link
vega
ensembl
MGI
NCBI
xref
GI:149271791
GeneID:60600
MGI:1194903
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 1 Protein
product
: testis specific gene A8
transcript_id
: XR_035356.1
clone name
MSMg01-296D08
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-529N19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-131M20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-045I18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-477J23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-141N23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-062C20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-302O02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-338N01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-145D21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-046I01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-504F17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-378G17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-502I05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-386J15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-291O10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-416A19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-393P22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-449C22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-514I19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-363P05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-489B10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-442L01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-536N02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-098F23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-492G15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-045H01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-313I22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-070F13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-098L01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-144M19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-170P01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-547P17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-457F19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-462C20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-316F13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-236O10
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-101G12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-265P19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-144J22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-488A09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-105M17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-262D21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-429F02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-184P14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-482A03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-202D02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-498C18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-492K21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-313J19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-545D02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-313K19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-400F16
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-059M01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-524D02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-061A22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-110A23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-089C06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-543K09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-109B01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-050C24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-193F13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-235M18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-528C19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-181H24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-035F02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-017B21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-155I06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-335D23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-245M01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-291K03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-308O02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-243O10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-073H17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-089I20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-267C02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-021L09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-292O19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-064D04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-111K02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-037O15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-070I23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-253L07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-082I10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-286D14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-326F22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-313O09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-299H03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-274B09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-333B23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-206K07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-337C09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-201G03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-321E06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-069D16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-042B12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-199C20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-124A18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-162N21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-132D20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-250C09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-214E05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-004J20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-062M01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-232B20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-232L01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-044L17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-269P22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-196J16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-057L10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-215O17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-101H06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-028K11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-191D01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-253M02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-317B09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-145L10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-093H18
singlet/doublet
doublet
plural/unique
unique