BAC Information

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BAC

Clone NameB6Ng01-083K22
ChromosomeX (Build37)
Map Location 159,145,808 - 159,293,183
singlet/doubletdoublet
Overlap geneRbbp7, 4932441K18Rik, LOC671250
Upstream geneRai2, Gm47, Nhs, Reps2, LOC654358, LOC100041557, LOC667630
Downstream geneSyap1, LOC100041607, Ctps2, S100g, LOC100040610, EG637051, Grpr, 1700045I19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083K22.bB6Ng01-083K22.g
ACCDH897875DH897876
length1151,015
definitionDH897875|Mus musculus domesticus DNA, BAC clone: B6Ng01-083K22, 5' end.DH897876|Mus musculus domesticus DNA, BAC clone: B6Ng01-083K22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(159,293,069 - 159,293,183)(159,145,808 - 159,146,986)
sequence
cagggatgacaatggttacaggatctcttgttttcaaaactttgtatgaa
gccagacgtggtggtgtacgcctttaatcccagcacttgggaggcagagg
caggtggatttctga
gaattctaaatttgaggtcagcctgaaatacataatgagatcttgtctca
aagaaaaaccagccaggcagtggtggtgcacgcctttaatcccagcactt
gggaggcagaggcaggcggatttctcagtttgaggccagcctgggctaca
aagtgatctccaggacagccagggctacacagagaaaccctgtctcgaga
aaaccagaaacaaaatcaaagaaaaatcagaaaggggtgtgggaaagcct
ggggtctaagtagagtgctttgctagcatgcatgctggaagcatagctca
cttggtaaagcacaaagctccgggttcaatccccagcagtctggctgtgg
cagaccatgcctataaccccagcactcggcaggatgatcagaagtctaaa
tggggactggggagatggctcagtcagtaaagtgcttgttgcccaaacct
gaggaccttagttttgatcctcagtatctaactaaaaaccagacagtcca
aggacagtggtagcacactcctataatcccagcactcaggaggcacaagg
caggcaaatctctctgaattggaggtcagtctggtctacagagtgagttc
caggacaaccacggctatacagagaaaccctgcctagaaaaaaaagcaaa
acaagcaagcaagcaaacaaacaaacaaaaagccaggtgccacaagcatg
tgcttgcaatcctagctctaaggcagcagagacatgtggagagagagaaa
acgagttcccattactgtacgtactgatgtaaactaaagaagactaaaaa
gggctggggagggctggggagatggctcagtgggtaagagcacccgactg
ctcttccgaagtctgaagttcaagtcccagcaaccacgtgttggctcaaa
acattccggtaatgagacttgacttccctcttcttggagtatctgaggat
agctacagtgtacttacatgtaataaataaattataaattataaattaat
cttttttaaaaaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_159293069_159293183
seq2: B6Ng01-083K22.b_52_166 (reverse)

seq1  TCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTAC  50

seq1  ACCACCACGTCTGGCTTCATACAAAGTTTTGAAAACAAGAGATCCTGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCACGTCTGGCTTCATACAAAGTTTTGAAAACAAGAGATCCTGTAA  100

seq1  CCATTGTCATCCCTG  115
      |||||||||||||||
seq2  CCATTGTCATCCCTG  115

seq1: chrX_159145808_159146986
seq2: B6Ng01-083K22.g_69_1083

seq1  GAATTCTAAATTTGAGGTCAGCCTGAAATACATAATGAGATCTTGTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAATTTGAGGTCAGCCTGAAATACATAATGAGATCTTGTCTCA  50

seq1  AAGAAAAACCAGCCAGGCAGTGGTGGTGCACGCCTTTAATCCCAGCACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAACCAGCCAGGCAGTGGTGGTGCACGCCTTTAATCCCAGCACTT  100

seq1  GGGAGGCAGAGGCAGGCGGATTTCTCAGTTTGAGGCCAGCCTGGGCTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCAGAGGCAGGCGGATTTCTCAGTTTGAGGCCAGCCTGGGCTACA  150

seq1  AAGTGATCTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATCTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAGA  200

seq1  AAACCAGAAACAAAATCAAAGAAAAATCAGAAAGGGGTGTGGGAAAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGAAACAAAATCAAAGAAAAATCAGAAAGGGGTGTGGGAAAGCCT  250

seq1  GGGGTCTAAGTAGAGTGCTTTGCTAGCATGCATGCTGGAAGCATAGCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCTAAGTAGAGTGCTTTGCTAGCATGCATGCTGGAAGCATAGCTCA  300

seq1  CTTGGTAAAGCACAAAGCTCCGGGTTCAATCCCCAGCAGTCTGGCTGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTAAAGCACAAAGCTCCGGGTTCAATCCCCAGCAGTCTGGCTGTGG  350

seq1  CAGACCATGCCTATAACCCCAGCACTCGGCAGGATGATCAGAAGTCTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCATGCCTATAACCCCAGCACTCGGCAGGATGATCAGAAGTCTAAA  400

seq1  TGGGGACTGGGGAGATGGCTCAGTCAGTAAAGTGCTTGTTGCCCAAACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGACTGGGGAGATGGCTCAGTCAGTAAAGTGCTTGTTGCCCAAACCT  450

seq1  GAGGACCTTAGTTTTGATCCTCAGTATCTAACTAAAAACCAGACAGTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACCTTAGTTTTGATCCTCAGTATCTAACTAAAAACCAGACAGTCCA  500

seq1  AGGACAGTGGTAGCACACTCCTATAATCCCAGCACTCAGGAGGCACAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGTGGTAGCACACTCCTATAATCCCAGCACTCAGGAGGCACAAGG  550

seq1  CAGGCAAATCTCTCTGAATTGGAGGTCAGTCTGGTCTACAGAGTGAGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAAATCTCTCTGAATTGGAGGTCAGTCTGGTCTACAGAGTGAGTTC  600

seq1  CAGGACAACCACGGCTATACAGAGAAACCCTGCCTAGAAAAAAAAGCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAACCACGGCTATACAGAGAAACCCTGCCTAGAAAAAAAAGCAAA  650

seq1  ACAAGCAAGCAAGCAAACAAACAAACAAAAAGCCAGGTGCCACAAGCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCAAGCAAGCAAACAAACAAACAAAAAGCCAGGTGCCACAAGCATG  700

seq1  TGCTTGCAATCCTAGCTCTAAGGCAGCAGAGACATGTGGAGAGAGAGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGCAATCCTAGCTCTAAGGCAGCAGAGACATGTGGAGAGAGAGAAA  750

seq1  ACGAGTTCCCATTACTGTACGTACTGATGTAAACTAAAGAAGACTAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGTTCCCATTACTGTACGTACTGATGTAAACTAAAGAAGACTAAAAA  800

seq1  GGGCTGGGGAGGGCTGGGGAGATGGCTCAGTGGGTAAGAGCACCCGACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGGGAGGGCTGGGGAGATGGCTCAGTGGGTAAGAGCACCCGACTG  850

seq1  CTCTTCCGAAGGTCTGAAGTTCAAGTCCCAGCAACCACGTGGTGGCTCAA  900
      |||||||||| |||||||||||||||||||||||||||||| ||||||||
seq2  CTCTTCCGAA-GTCTGAAGTTCAAGTCCCAGCAACCACGTGTTGGCTCAA  899

seq1  AACCATCC-GTAATGAGACCTGAC-TCCCTCTTC-TGGAGTATCTGAGGA  947
      |||  ||| |||||||||| |||| ||||||||| |||||||||||||||
seq2  AACATTCCGGTAATGAGACTTGACTTCCCTCTTCTTGGAGTATCTGAGGA  949

seq1  TAGCTACAGTGTACTTACATGTAATAAATAAATAAATAAATAAATAAATA  997
      |||||||||||||||||||||||||||||||||  ||||||  |||||| 
seq2  TAGCTACAGTGTACTTACATGTAATAAATAAAT-TATAAAT-TATAAATT  997

seq1  AATCTTTTTTTAAAAAAAAGGGCTGGGGAGATGGCTCAGTGGGTAAGAGC  1047
      |||||||||| ||||||                                 
seq2  AATCTTTTTTAAAAAAAG--------------------------------  1015

seq1  ACTGACTGCTTTTCCAAAGGTCCTGCGTTCAAATCCCAGCAGCCACATGG  1097
                                                        
seq2  --------------------------------------------------  1015

seq1  TGGCTCACAACCACCCATAACGAGATCTGAGCTACAGTGTACTTATGTAT  1147
                                                        
seq2  --------------------------------------------------  1015

seq1  AATAATAATAAATAAATCTTTTTTAAAAAAAG  1179
                                      
seq2  --------------------------------  1015