BAC Information

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BAC

Clone NameB6Ng01-083O03
ChromosomeX (Build37)
Map Location 142,319,795 - 142,320,076
singlet/doubletsinglet
Overlap genenone
Upstream geneZcchc16, LOC623591, Lhfpl1, Amot, EG434860, LOC100039313, LOC623697
Downstream geneLOC623731, LOC237096, LOC100039558, EG666730
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083O03.bB6Ng01-083O03.g
ACCDH898017DH898018
length1,218526
definitionDH898017|Mus musculus domesticus DNA, BAC clone: B6Ng01-083O03, 5' end.DH898018|Mus musculus domesticus DNA, BAC clone: B6Ng01-083O03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttggcctgtgctactgctgaaagccacgtctgggtctgtggcca
tgcatcaacagtgatatgtgttgacatcatggctcacattaccactaaag
gccttgcagatgttcctgatctctgctgccatctgagaccatgttgatgt
ccaagggctgtgcagcgatggccctgtccctcactggctgtagcactctg
aatagatggctgaagcactggggagtatgggccctgcatgcacctagcct
aggcagcagagtagagctcactctggtggcatgagcacaagacagctggc
cctgccacttgttcgctttgtggtggtatggctgagggacagatgcctct
ccccacctcattcctcggctgctggcaacagagctggtccagaggtcata
agagtgagagacctagacctgccctttgtaggctgcaacactcaggaaaa
caggctcacatctcacctgggaagtaagtacattagagctaactctggta
gcatgggcacaagtgagctggtccccaagggtgtgagagtaggagagctg
gccctgactcttgcttgctgtggcatttggttgcttgctgtaccaactca
gctactgcccaggtccagatgcagggctttgagttgcccaacccaacatc
ttacctcatctatgaactgcaagaacatttgaaggggctggtccaaaatt
gcaggacctccatgatagatggcaatgacaggatattcaagaggtgtccc
aatgatgatccagttttgatagggtagcagaagccagaggcctcaaacca
gaccaatgattcactgcaaagaacatttacaagtaaagatgtgtggacca
aagagtatcctgtgcagcacgctgtgacacatttcagcctcctcagtgag
attttgtttgttttgttcatttgttttatttatttatttttgttctttat
tttctttggggggcgttttgcaagggcagagaaagatatgaagggactgg
cagatgagggggactggggtgcatgataaataattctagaaattattaaa
aaaataaaaacttcagcagcaggaggcttgctggaaaatatataagaagg
acctattaactagcaattgttgtgccagggatcttactctgcatgtgtct
aagtaagattggatcacctgtcaggagtgataaacttataattataccgg
ccttacttaagggggatt
tttgcttagccctgtaccccatttttaatagggttatttggttttctgga
gtccccttttttatgggtgaaataggggtgggtgaagaccagagtgagct
gatcaggtatagggggagatagattaagggaaagaatgtagagagagata
ggtgaagttgatgagaatttgatggacaatatgaaaacctagtggagtag
aaactttatcgattgtatgaaggtgatcctaatgaggacccctagtattg
agggatatagagtctcaacttgccatctcttgtagccaggtgagacttcc
agtgacattactgggttgcattcaattcgtttgttgacccgtgcttcccg
acaatctgtaggtcacattttgcctgcaaaatatgctagggcaatggtgg
cacagaacttctagaattggccagccaatgtctgacttgatttaaaagcc
aatggtaaaattcaatactactggtcatatgatagatagatagatagata
gatagatagatagacagatagataga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_142319795_142320076
seq2: B6Ng01-083O03.g_549_599 (reverse)

seq1  TCTATCTACCTGTCATCTATCATCTATGTATCTATATCTATATATTTATA  50
                                                        
seq2  --------------------------------------------------  0

seq1  CATGTATCTGTGTATGTATTTATCTACCATCTACCTATGTAGCTATCATC  100
                                                        
seq2  --------------------------------------------------  0

seq1  TATGTGTCTGTCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA  150
                ||||||||||| ||||||||||||||||||||||||||||
seq2  ----------TCTATCTATCTGTCTATCTATCTATCTATCTATCTATCTA  40

seq1  TCTATAATTTATGTATGTATCTATGAATCTATCATCTATTTGTCTATCAT  200
      ||||| |  ||||                                     
seq2  TCTATCA--TATG-------------------------------------  51

seq1  CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTA  250
                                                        
seq2  --------------------------------------------------  51

seq1  TTTATCGATCACTTTGATCTATCTATCATATG  282
                                      
seq2  --------------------------------  51