BAC Information

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BAC

Clone NameB6Ng01-084I06
ChromosomeX (Build37)
Map Location 4,333,930 - 4,335,091
singlet/doubletsinglet
Overlap geneLOC670673
Upstream geneOTTMUSG00000016405, OTTMUSG00000016411, LOC668961, LOC100042159, LOC100042168, LOC627187, LOC100042185, OTTMUSG00000016407, OTTMUSG00000016437, OTTMUSG00000016420, LOC547057, EG546327, EG668965, LOC546185, LOC100043933
Downstream geneLOC100042254, LOC100043934, LOC100042267, LOC100042275, LOC668967, LOC434724, LOC100043935, LOC668968, LOC546182, Mycs, LOC668969, LOC668970, OTTMUSG00000016453, LOC627412
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084I06.bB6Ng01-084I06.g
ACCDH898447DH898448
length1,147866
definitionDH898447|Mus musculus domesticus DNA, BAC clone: B6Ng01-084I06, 5' end.DH898448|Mus musculus domesticus DNA, BAC clone: B6Ng01-084I06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttagttttcctgaaagccagaaggtgccaccatgcctcaccct
gcttccacacctcttcccaatctgtttctttcttcactctgttcctcttc
cagggagcctctctctgccactcctctctctttggtttccttccacctct
ctttgggcagtcatatcattctgccccctcctccaccacccatctcctgt
tccttctcctctcccgaccaagacctgaccagataagtcccattccattt
ttagatgaccgcttatgatactagctcacttttctcacaggctgaattga
cagctgctccatccgtccgttttccactcaccaaacacacccagcagagt
gcttcagacagcatgccatacccacagaagcctgcattcttcaggaaaac
tggtatgtttgcattgagcccaggacacattctagaacagcaacctgagc
ccatctggaaattacaatttcaactttatttccaaagaaattaactttat
ttctgtagttttgataatgcagtaacaaatggttagaagtgttttaccag
gtcgtagagatagatatggaaatcatcttcaaacttgatgaagtacagta
ggcttggcttcaacctggtgaatgaccattctgaccctcctggagcggtc
atctttggtgtattccacgtgttttcctatcaggccattcacaagctcca
ggtcgatgtctaaaggagggagatcactgaacacctccacaataaggagg
tcaccctctttataatcatccagaagctggtatgtataatacaggatctc
tctcataagtaatataaaagttgctatccaagataggcactagtcccagg
accatcccactccactcgtccttagagccatgctcaccctcaaatagatg
attaactgctttgccaattatggcatcagcaaggctggcatcagtgactc
ggatgatgccactttgtcagaaagaactttagggacaataccctctatct
gtgtgaaattccagcccatacatgcagtcatcccatcatcatatttcctc
cagtaagggagggtttataggccacttgatcagcacagtcccttccactg
tgtgaattagctcatctcctctcctcatgagaatctgcagccacaat
gaattcatcttggaagattttacctttgaggagtatgaagtgcctatcct
tgtcttttttgataaatttgggatggaagccgattttatccgatattaga
atgactactccagcttgtttcttcagaacatttgcttggaaaattgtttt
ccaaccttttactctaagggagtgtctgtctttttccctgaagtgagttt
cctgtatccagaaaaatgttgggtcctattacatagccagtctgttagtc
tgtctttttattaggagaattgagtctgttgatattgagatatattaagg
aaaagcaattatggcttcttgttatttttgatgttacatttggggttctg
ttcttgcgactgtcttcttttagttttgttgaaggattactttcttgctt
tttctttttttttgtttttttgtttttttggtttttttttgttttttttt
tgttttttttttgtgttttttttccatttttttttaggtatttagctcat
ttacatttcctattttttccattttttattaggtatttagcccatttaca
tttccaatgctataccaatagtcccccatacccacccacccccaaccccc
tacccacccactcccccttttttggccctggctttcccctgtactgtggg
catataaagtttgcgtgtcccaatgggcctctctttccagtgatggccga
ctaaggccatctttttgatacatatgcagctagagtcaagagctcccggg
gtactggttagttcataatgttgttccgcctatagggttgcagatccctt
tagctccttggctactttctctagcctcctccattgggagccctgtgatc
catccattagctgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_4333930_4335091
seq2: B6Ng01-084I06.b_46_1192

seq1  GAATTCCTTAGTTTTCCTGAAAGCCAGAAGGTGCCACCATGCCTCACCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAGTTTTCCTGAAAGCCAGAAGGTGCCACCATGCCTCACCCT  50

seq1  GCTTCCACACCTCTTCCCAATCTGTTTCTTTCTTCACTCTGTTCCTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCACACCTCTTCCCAATCTGTTTCTTTCTTCACTCTGTTCCTCTTC  100

seq1  CAGGGAGCCTCTCTCTGCCACTCCTCTCTCTTTGGTTTCCTTCCACCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGCCTCTCTCTGCCACTCCTCTCTCTTTGGTTTCCTTCCACCTCT  150

seq1  CTTTGGGCAGTCATATCATTCTGCCCCCTCCTCCACCACCCATCTCCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGCAGTCATATCATTCTGCCCCCTCCTCCACCACCCATCTCCTGT  200

seq1  TCCTTCTCCTCTCCCTGACCAAGACCTGACCAGATAAGTCCCATTCCATT  250
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCCTTCTCCTCTCCC-GACCAAGACCTGACCAGATAAGTCCCATTCCATT  249

seq1  TTTAGATGACTGCTTATGATACTAGCTCACTTTTCTCACAGGCTGAATTG  300
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATGACCGCTTATGATACTAGCTCACTTTTCTCACAGGCTGAATTG  299

seq1  ACAGCTGCTCCATCCGTCCGTTTTCCACTCACCAAACACACCCAGCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGCTCCATCCGTCCGTTTTCCACTCACCAAACACACCCAGCAGAG  349

seq1  TGCTTCAGACAGCATGCCATACCCACAGAAGCCTGCATTCTTCAGGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAGACAGCATGCCATACCCACAGAAGCCTGCATTCTTCAGGAAAA  399

seq1  CTGGTATGTTTGCATTGAGCCCAGGACACATTCTAGAACAGCAACCTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTATGTTTGCATTGAGCCCAGGACACATTCTAGAACAGCAACCTGAG  449

seq1  CCCATCTGGAAATTACAATTTCAACTTTATTTCCAAAGAAATTAACTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCTGGAAATTACAATTTCAACTTTATTTCCAAAGAAATTAACTTTA  499

seq1  TTTCTGTAGTTTTGATAATGCAGTAACAAATGGTTAGAAGTGTTTTACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTAGTTTTGATAATGCAGTAACAAATGGTTAGAAGTGTTTTACCA  549

seq1  GGTCGTAGAGATAGATATGGAAATCATCTTCAAACTTGATGAAGTACAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCGTAGAGATAGATATGGAAATCATCTTCAAACTTGATGAAGTACAGT  599

seq1  AGGCTTGGCTTCAACCTGGTGAATGACCATTCTGACCCTCCTGGAGCGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGGCTTCAACCTGGTGAATGACCATTCTGACCCTCCTGGAGCGGT  649

seq1  CATCTTTGGTGTATTCCACGTGTTTTCCTATCAGGCCATTCACAAGCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTGGTGTATTCCACGTGTTTTCCTATCAGGCCATTCACAAGCTCC  699

seq1  AGGTCGATGTCTAAAGGAGGGAGATCACTGAACACCTCCACAATAAAGAG  750
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGGTCGATGTCTAAAGGAGGGAGATCACTGAACACCTCCACAATAAGGAG  749

seq1  GTCACCCTCTTTATAATCATCCAGAAGCTGGTATGTATAATACAGGATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCCTCTTTATAATCATCCAGAAGCTGGTATGTATAATACAGGATCT  799

seq1  CTCTCATAAGTAATATAAAAGTTGCTATCCAAGATAGGCACTTGTCCCAG  850
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTCTCATAAGTAATATAAAAGTTGCTATCCAAGATAGGCACTAGTCCCAG  849

seq1  GACCATCCCACTCCACTCGTCCTTAGAGCCATGCTCACCCTCAAATAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATCCCACTCCACTCGTCCTTAGAGCCATGCTCACCCTCAAATAGAT  899

seq1  GATTAACTGCTTTGCCAATTATGGCATCAGCAAGGCTGGCATCAGTGACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAACTGCTTTGCCAATTATGGCATCAGCAAGGCTGGCATCAGTGACT  949

seq1  CGGGATGATGCCACTTTGTCAGAAAGAACTTTTAGGGACAATACCCTCTT  1000
      | ||||||||||||||||||||||||||| |||||||||||||||||| |
seq2  C-GGATGATGCCACTTTGTCAGAAAGAAC-TTTAGGGACAATACCCTC-T  996

seq1  ATCTGTGTGAAACTCCAGCCCATACATGCAGTCAATCCCATCATCATATT  1050
      |||||||||||| |||||||||||||||||||| ||||||||||||||||
seq2  ATCTGTGTGAAATTCCAGCCCATACATGCAGTC-ATCCCATCATCATATT  1045

seq1  T-CTCCAGGTATAGGGAGGGGTTTATAGG-CACTTGATCCAGCACAGTCC  1098
      | ||||| ||| ||||| ||||||||||| |||||||| |||||||||||
seq2  TCCTCCA-GTA-AGGGA-GGGTTTATAGGCCACTTGAT-CAGCACAGTCC  1091

seq1  CTTTCCACTGTGTG-ATATGCTCATCTCCTTCTTTCCTCTCATGAGAAAT  1147
      | |||||||||||| ||  ||||||||||     ||  ||||||||||  
seq2  C-TTCCACTGTGTGAATTAGCTCATCTCC-----TCTCCTCATGAGAA--  1133

seq1  TCTGCAGCCCACAAT  1162
      ||||||| |||||||
seq2  TCTGCAG-CCACAAT  1147