BAC Information

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BAC

Clone NameB6Ng01-084M12
ChromosomeX (Build37)
Map Location 125,909,492 - 126,053,470
singlet/doubletdoublet
Overlap geneLOC100040570, LOC669120
Upstream geneEG237030, LOC100040538, LOC100040550, LOC100040562
Downstream geneDiap2, LOC100040092, LOC665773
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084M12.bB6Ng01-084M12.g
ACCDH898634DH898635
length639228
definitionDH898634|Mus musculus domesticus DNA, BAC clone: B6Ng01-084M12, 5' end.DH898635|Mus musculus domesticus DNA, BAC clone: B6Ng01-084M12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,909,492 - 125,910,109)(126,053,243 - 126,053,470)
sequence
gaattcttaatgagcaaattagacattgagcctcttgaggaaaacctaca
atttggattggttctgtatttgttgtagaccttctaagttatacagtgga
aaatttatgaaacaacaaaatctgaaacacagaaaactagagaatagtct
catcttcaatatgttacctagaacagccatactctgatgaagcccaaggt
aggtgaggtaaataggaagaccgtaaaaaagaaaagaatcaccaagatgc
ctgagcacatgtacaggaataaaaaagatgatgcacaatggactggaaag
catgctgttagctcagtgatagttcaaaaaaggaaaattaggctgagaat
cagaatggtcttttgccaagttaatctaaccatatgatcatttgacagcc
atagagaatatttttaaaaactgtaacaggtatttaataaatagcctagt
aaggtcatgaaagaagaaacagtgaatactaacaatatcaaaaactgtct
ttttggtttaatttttttcttactaataaagttcttactaatgagatcac
ttcaggcaagtaggctgtgatctattctctctctctctctctctctctct
ctctctctctctctctctgtgtgtgtgtgtgtgtgtgtg
acttgtttgaggtatttctttgaatggatatctagtcttgtctttgttgg
gtaagtgcttggatcctggttttgctgttacatcaactcgttaggctatg
ctttaggtgaatgatgctcacttttcagtctttggacaattctggaattc
caggtacagtatccatgtggtctcaggtaggtgtggtaggtggaatgact
aatatatgaggatgtgggggaaggggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_125909492_125910109
seq2: B6Ng01-084M12.b_42_659

seq1  GAATTCTTAATGAGCAAATTAGACATTGAGCCTCTTGAGGAAAACCTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAATGAGCAAATTAGACATTGAGCCTCTTGAGGAAAACCTACA  50

seq1  ATTTGGATTGGTTCTGTATTTGTTGTAGACCTTCTAAGTTATACAGTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGATTGGTTCTGTATTTGTTGTAGACCTTCTAAGTTATACAGTGGA  100

seq1  AAATTTATGAAACAACAAAATCTGAAACACAGAAAACTAGAGAATAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATGAAACAACAAAATCTGAAACACAGAAAACTAGAGAATAGTCT  150

seq1  CATCTTCAATATGTTACCTAGAACAGCCATACTCTGATGAAGCCCAAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCAATATGTTACCTAGAACAGCCATACTCTGATGAAGCCCAAGGT  200

seq1  AGGTGAGGTAAATAGGAAGACCGTAAAAAAGAAAAGAATCACCAAGATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGGTAAATAGGAAGACCGTAAAAAAGAAAAGAATCACCAAGATGC  250

seq1  CTGAGCACATGTACAGGAATAAAAAAGATGATGCACAATGGACTGGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCACATGTACAGGAATAAAAAAGATGATGCACAATGGACTGGAAAG  300

seq1  CATGCTGTTAGCTCAGTGATAGTTCAAAAAAGGAAAATTAGGCTGAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGTTAGCTCAGTGATAGTTCAAAAAAGGAAAATTAGGCTGAGAAT  350

seq1  CAGAATGGTCTTTTGCCAAGTTAATCTAACCATATGATCATTTGACAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGGTCTTTTGCCAAGTTAATCTAACCATATGATCATTTGACAGCC  400

seq1  ATAGAGAATATTTTTAAAAACTGTAACAGGTATTTAATAAATAGCCTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAATATTTTTAAAAACTGTAACAGGTATTTAATAAATAGCCTAGT  450

seq1  AAGGTCATGAAAGAAGAAACAGTGAATACTAACAATATCAAAAACTGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCATGAAAGAAGAAACAGTGAATACTAACAATATCAAAAACTGTCT  500

seq1  TTTTGGTTTAATTTTTTTCTTACTAATAAAGTTCTTACTAATGAGATCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTTTAATTTTTTTCTTACTAATAAAGTTCTTACTAATGAGATCAC  550

seq1  TTCAGGCAAGTAGGCTGTGATCTATTCTCTCTCTCTCTCTCTCTCTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGCAAGTAGGCTGTGATCTATTCTCTCTCTCTCTCTCTCTCTCTCT  600

seq1  CTCTCTCTCTCTCTCTCT  618
      ||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCT  618

seq1: chrX_126053243_126053470
seq2: B6Ng01-084M12.g_75_302 (reverse)

seq1  ATCCCCTTCCCCCACATCCTCATATATTAGTCATTCCACCTACCACACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTTCCCCCACATCCTCATATATTAGTCATTCCACCTACCACACCT  50

seq1  ACCTGAGACCACATGGATACTGTACCTGGAATTCCAGAATTGTCCAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGACCACATGGATACTGTACCTGGAATTCCAGAATTGTCCAAAGA  100

seq1  CTGAAAAGTGAGCATCATTCACCTAAAGCATAGCCTAACGAGTTGATGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAAGTGAGCATCATTCACCTAAAGCATAGCCTAACGAGTTGATGTA  150

seq1  ACAGCAAAACCAGGATCCAAGCACTTACCCAACAAAGACAAGACTAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAAACCAGGATCCAAGCACTTACCCAACAAAGACAAGACTAGATA  200

seq1  TCCATTCAAAGAAATACCTCAAACAAGT  228
      ||||||||||||||||||||||||||||
seq2  TCCATTCAAAGAAATACCTCAAACAAGT  228