BAC Information

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BAC

Clone NameB6Ng01-084P16
ChromosomeX (Build37)
Map Location 107,139,886 - 107,140,450
singlet/doubletsinglet
Overlap genenone
Upstream gene5730416F02Rik, Nsbp1, Sh3bgrl, EG622976, LOC100042831, LOC213474, LOC245573
Downstream geneEG634340, LOC668530, LOC100043316, Pou3f4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084P16.bB6Ng01-084P16.g
ACCDH898778DH898779
length1,2111,023
definitionDH898778|Mus musculus domesticus DNA, BAC clone: B6Ng01-084P16, 5' end.DH898779|Mus musculus domesticus DNA, BAC clone: B6Ng01-084P16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgagtcaaatgcctgtgctttccttaatattttacatactatc
catactcttatataaaggctataccaattcatattcatgaccaataaaaa
tatttttgtcaatactttttttctaattaattccaatatttatttccttt
tttaatttttttattacattatttcctcaattacatttccaatgctatcc
caaaagtcccccataccctcccacccaccttccttacccacccattccca
tttttttggccctggcgttcccctgtactggggcatatacagtttgcatg
tccaatgggcctctctttccagtgatggccaactaggccatcttttgata
catatgcagctagagtcaagagctcaggggtactggtaagttcaaaatgt
tgatccacataaagggtttcacattccttaagctccttgggtactttctg
tagctcctccatttggagccctgtgatccatccaatggctgactatgagc
atccacttctgtgtttgctaggcccccctgagtctcacaagagacagcta
catcagggtcctttcaataaaatcttgctagtgtatgcaagggtgtccac
atttggaagctgattacgggggtggtctggtggtcactggtgttcctaca
tcgaactgacttggacaggaactatgttactccagcgcagccgcttgtcc
cctcggagactcgtaaaaatccttatgaccgagtacctgtgatcattgca
ctatttggagtgaagatgtcctcgtgcatgggaagtttgtaccacatctg
gacgtcagatccactctccataatacattgccagacactgcaatgcaaac
aaaatcctccagcaaagaacgtgcccaagggacctgactaagctctgctt
gcggatgagatacaggcggtaggagactactccgtagctcagcttatcat
agcacacgtgtcatctgcaacagtggctaatagagctcatagcatgagag
tgctacggctgcacactcatttcgaagatgtacatcgctagtacacagaa
aggattcatcacctggttagatggatgcgcattgactgtatcgagccaca
gagcatttcgtgaaatatagcacgagcatgtttcactccagcgtatcagg
actgatgcagcgtcgtacagtaaaggccctgaagatactggaccatacac
gctttcgatgc
gaattctgtgcttccctgtatatgttaaatattcttggacagtcttaaag
aagttatctaatacacctcaagttacattgttgttcctgttcctttaaaa
atcccttttttggtcactaatatctattagattaaaaattcattaagatg
tttatatggtatgtttggggggatacatgtgtgctaatctacccatgtgg
aaataagagaataactttgtaagtgggttctcttcttctatatcttagat
gggttctagtgagaaaagaaaaggaaagaaaataaaagtaaggaaacagg
tgaattggatttgctaggagataacttttactagctgagctatctctaca
atcagatattttggtatgtttagttctgaattttaattttgatttaactc
ataattcacagaaaacagaaacaaaaattgaaaaacagtactatatccaa
tgagaaagcttttgcacaaataaactatagttattaacatcctgaagaga
taagtcataaaatgggaggtatttgtcagttattcatctaaaaatgaata
atactcagaacacactggaaaaacctaaataaacaataaaatagtaaatc
aaagtaaatcagttgcttgtaactgagtttttggtaaggaagtaacaggt
tacatctgtgaaagcttatatctaaacttgtatattatttatagtgaagt
ctataagaaatctggtagttttagctagttaacaaatttattaatgaata
aatataatggcagattaccttagggtaagaaactaggtctgttttctagc
tgtcaagctatagttaccttagttgtcaatgtagtcagaaatctggggaa
gaataaattataatctggagtcatgtagtaattaaaaatgacagagttca
tctatagtccaaatagttcccaagttcctgtggtctctatgaaacttggc
agagtcagtctggtttcaagctcagagacagcttcttttctctgttgaat
agatatgcatgaaatgagagatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_107139886_107140450
seq2: B6Ng01-084P16.g_70_634 (reverse)

seq1  GTGTGTTCTGAGTATTATTCATTTTTAGATGAATAACTGACAAATACCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTCTGAGTATTATTCATTTTTAGATGAATAACTGACAAATACCTC  50

seq1  CCATTTTATGACTTATCTCTTCAGGATGTTAATAACTATAGTTTATTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTATGACTTATCTCTTCAGGATGTTAATAACTATAGTTTATTTGT  100

seq1  GCAAAAGCTTTCTCATTGGATATAGTACTGTTTTTCAATTTTTGTTTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAGCTTTCTCATTGGATATAGTACTGTTTTTCAATTTTTGTTTCTG  150

seq1  TTTTCTGTGAATTATGAGTTAAATCAAAATTAAAATTCAGAACTAAACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTGAATTATGAGTTAAATCAAAATTAAAATTCAGAACTAAACAT  200

seq1  ACCAAAATATCTGATTGTAGAGATAGCTCAGCTAGTAAAAGTTATCTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAATATCTGATTGTAGAGATAGCTCAGCTAGTAAAAGTTATCTCCT  250

seq1  AGCAAATCCAATTCACCTGTTTCCTTACTTTTATTTTCTTTCCTTTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATCCAATTCACCTGTTTCCTTACTTTTATTTTCTTTCCTTTTCTT  300

seq1  TTCTCACTAGAACCCATCTAAGATATAGAAGAAGAGAACCCACTTACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACTAGAACCCATCTAAGATATAGAAGAAGAGAACCCACTTACAAA  350

seq1  GTTATTCTCTTATTTCCACATGGGTAGATTAGCACACATGTATCCCCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTCTCTTATTTCCACATGGGTAGATTAGCACACATGTATCCCCCCA  400

seq1  AACATACCATATAAACATCTTAATGAATTTTTAATCTAATAGATATTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATACCATATAAACATCTTAATGAATTTTTAATCTAATAGATATTAGT  450

seq1  GACCAAAAAAGGGATTTTTAAAGGAACAGGAACAACAATGTAACTTGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAAAAAGGGATTTTTAAAGGAACAGGAACAACAATGTAACTTGAGG  500

seq1  TGTATTAGATAACTTCTTTAAGACTGTCCAAGAATATTTAACATATACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTAGATAACTTCTTTAAGACTGTCCAAGAATATTTAACATATACAG  550

seq1  GGAAGCACAGAATTC  565
      |||||||||||||||
seq2  GGAAGCACAGAATTC  565