MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-085A03
Chromosome	X (Build37)
Map Location	107,040,167 - 107,041,318
singlet/doublet	singlet
Overlap gene	none
Upstream gene	5730416F02Rik, Nsbp1, Sh3bgrl, EG622976, LOC100042831, LOC213474
Downstream gene	LOC245573, EG634340, LOC668530, LOC100043316, Pou3f4
Link	Open Mouse BAC browser

Click to get alignment info.

name	5730416F02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70550 MGI:1917800
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Nsbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50887 MGI:1355295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sh3bgrl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56726 MGI:1930849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622976 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622976 MGI:3647255
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042831 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042831
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins

name	LOC213474 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:213474
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 19 ESTs, 4 Proteins pseudo : _no_value

name	LOC245573 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:245573
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 ESTs, 25 Proteins pseudo : _no_value

name	EG634340 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:634340 MGI:3647708
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	LOC668530 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668530
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	LOC100043316 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043316
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein

name	Pou3f4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18994 MGI:101894
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nsbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778914 GeneID:50887 MGI:1355295
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleosome binding protein 1 transcript_id : NM_016710.2

name	Sh3bgrl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543698 GeneID:56726 MGI:1930849
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SH3-binding domain glutamic acid-rich protein like transcript_id : NM_019989.2

name	EG622976 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85702299 GeneID:622976 MGI:3647255
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG622976 transcript_id : NM_001037917.1

name	LOC100042831 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271826 GeneID:100042831
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins product : similar to DnaJ (Hsp40) homolog, subfamily C, member 5 beta transcript_id : XM_001478909.1

name	LOC100043316 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271865 GeneID:100043316
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein product : hypothetical protein LOC100043316 transcript_id : XM_001479755.1

name	Pou3f4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679426 GeneID:18994 MGI:101894
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : POU domain, class 3, transcription factor 4 transcript_id : NM_008901.1

name	Nsbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133778915 GeneID:50887 MGI:1355295
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005654 - nucleoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006356 - regulation of transcription from RNA polymerase I promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : nucleosome binding protein 45; snoRNA MBII-8 product : nucleosome binding protein 1 protein_id : NP_057919.2

name	Sh3bgrl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910548 GeneID:56726 MGI:1930849
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : SH3-binding domain glutamic acid-rich protein like protein_id : NP_064373.1

name	EG622976 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702300 CCDS:CCDS30354.1 GeneID:622976 MGI:3647255
definition	codon_start : 1 product : hypothetical protein LOC622976 protein_id : NP_001033006.1

name	LOC100042831 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271827 GeneID:100042831
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478959.1

name	LOC100043316 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271866 GeneID:100043316
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479805.1

name	Pou3f4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679427 CCDS:CCDS30355.1 GeneID:18994 MGI:101894
definition	GO_component : GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : brain-4 class III POU-domain protein; sex linked fidget; POU domain, class 3, transcription factor 4 (Pou3f4) product : POU domain, class 3, transcription factor 4 protein_id : NP_032927.1

name	LOC668530 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668530
definition	number : 1 pseudo : _no_value

name	LOC668530 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668530
definition	number : 2 pseudo : _no_value

name	5730416F02Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149271862 GeneID:70550 MGI:1917800
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730416F02 gene transcript_id : XR_001637.2

name	LOC213474 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271828 GeneID:213474
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 19 ESTs, 4 Proteins product : similar to eukaryotic translation initiation factor 4B pseudo : _no_value transcript_id : XR_033986.1

name	LOC245573 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271863 GeneID:245573
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 ESTs, 25 Proteins product : similar to nuclear pore-targeting complex component of 58 kDa pseudo : _no_value transcript_id : XR_034361.1

name	EG634340 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149271864 GeneID:634340 MGI:3647708
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG634340 pseudo : _no_value transcript_id : XR_002195.2

clone name	MSMg01-427L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159F21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-502P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332M21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-085A03.b	B6Ng01-085A03.g
ACC	DH898800	DH898801
length	1,151	1,265
definition	DH898800\|Mus musculus domesticus DNA, BAC clone: B6Ng01-085A03, 5' end.	DH898801\|Mus musculus domesticus DNA, BAC clone: B6Ng01-085A03, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcaatttaaagggctccttgtgatttcatttcaaggcatggtataa gcaacatgtccaagaatgttgatagtaaagatgaccattgctaaaagttt atgttgaaagaagcagtcataatttgacctaattatgggtttctaaacct ttgtaaaatcttggaagtttaccttgtcagtttggcctaactgcaattag tttcttttatttgaggcaaaatgtacttaaaacctgcacttaaaaaggat gtaaaacagtcaaagaagcataacacttaacctctattcatctaaaatat atattcctttgcagagaaagcctggacagtgtcaaatgaaacaagcaatt agtcgttttctaacagggagcagttcaaactgtaacatcatgccagacat gattaagaatgatacagcacatcatcattgtcaacactattcagccaatg taaaccttagttagaaatgtacttgtcagagaaaaatgcgcctttgattt ctattgcactttcccagtaattgctgtcatcagtggcaggttattattac agttgaatagagtttcagtaattacttttgcacagattctaacagctttt agattgaaggatattctgacagtttgaatactcttgacaacaattacctt tttcctggttaacactgattcaggaaaattaaaaattaaatctgttcaga ggaaacacttatgtatgtcactagtaagtgtgttgatataaaaaatgtgt aaatggcagaatgacttagatttttttaaagttctttttcactcaagtat ttttgataatcagcatttagggagatacagaccatgttcattagtttcaa agtaaatgatatggaaagtctaaaaccaatcctcaatccaattactaaca gaaaccactatatggggttgatgaaaaatagatattcatgagaacagagc acatattatttatatgttcatgtctatgtctaccttccttagataataga tgccaaagtacattcacatttttacatctgtcagagaagtaaaaatttgc tttctgcattttgcatttatatatattaacgtattcttcctttagaaaat agaggttaactgtggattaactggaaatatttgactgatctacttgtatg a	gaattctattacaactgcaaagaactaataccaccaatacttttcaaact attccacaaaatagaaacacaaggaacattacccaattcattctgtgaag ctacaattgtgtttatagctaaaacacacaaagaccctacaaagaaagag aacttcagagtattttcgcttatgaagatcaatgcaaaatactcaataaa tactctcaaaataaatctaaagaacacatgaaaaggatcacccatctcga tcaagtaggcttcatcatggggatgcagggacagttccatataaggaaat ctaccaatataatccactatataaacaaactcaaaggggggaaaaatgat catctcattagatgctgagaaagcatttgacacaattcaacaccctttca tggtaaaagtcttggaaacagtgggaattcaaagaccatactcaaatata gtaaaagtaatataccccaaaccagtatccaacatcacactaaatggaaa gaaaattgaagcaatcccactaaaatcaggaactacacaaggctgcccac tctctccctaccaaatttatataatactaaaatcctagccagagaaatta gacaacaaaaggaggtcaaagggtttcaaattgaaaagaaaaacgtcata atatcactatttgcagatgctatgatagtatatataagtaacccaaaaaa ttccaccagagaactcctacagctgataaacaacttcagcaaagtgactg gatataaaattaatgcaaacaaatcagtagccttcctctactcaaaggat aaacaggctgcgtaagaaattaaggaaataacacccttcacgatagtcac aaataatattaaataccttggtgtgactctaaccaagccaatgaaagacc tgtatgacaataacttcaagtatctcaagaaagaaattgaagaagacatc agaaaatggaggggatctccatgctcatggattgacaggattaatatagt aaaattgtcatctggccaagcaaagattcatgtaatctccatcaaaattc tacttcattcttcatgggagtagatggagccattatgtacattcatttgg aataccaaaaaaaaaaacaggataagtcaactattctaaaagtaaagaac ttcgggggattcccaagccctggaccaagcgtgtgtaggaatatctgata ggaaatactcctatgattgttcacgatggacatgggcggcgtgagtacta cactaggtgggagta
quality values	Open. Hide. 61 47 31 38 61 38 20 61 61 61 61 61 52 49 55 55 47 55 61 61 61 61 61 61 28 35 24 30 35 31 16 17 36 37 59 59 49 59 61 61 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 59 61 61 59 59 61 61 61 61 59 61 61 59 59 37 55 59 55 44 59 61 61 61 61 59 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 53 53 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 53 53 61 61 61 47 53 57 57 53 53 53 53 53 53 53 57 57 53 57 52 57 50 50 57 45 57 53 53 53 47 57 52 52 57 57 57 57 53 53 50 53 38 57 57 47 47 47 57 47 30 53 47 57 53 47 47 57 47 45 53 53 53 57 57 53 57 50 52 53 57 53 57 57 57 41 52 45 52 52 33 52 52 57 45 57 57 45 57 57 57 38 50 57 45 57 52 37 53 52 52 50 37 53 53 46 53 52 50 40 36 31 57 23 15 33 35 42 46 45 43 34 41 38 39 33 24 57 50 50 52 52 41 34 47 53 30 17 57 27 37 39 53 53 47 34 53 53 42 47 37 57 37 52 50 57 37 50 34 37 52 53 42 50 38 53 40 48 57 38 52 33 53 53 36 36 36 35 30 57 57 57 57 42 33 40 27 53 27 14 57 52 37 53 53 30 48 34 57 40 37 47 36 33 30 34 33 10 33 29 57 57 57 57 57 48 35 57 46 21 14 31 41 33 57 57 57 37 37 31 37 37 34 21 41 37 37 32 21 57 57 57 36 34 40 30 34 30 31 48 31 28 34 35 34 51 25 18 30 46 31 30 27 39 26 23 31 22 28 37 20 20 27 36 51 28 15 32 27 48 25 28 28 19 46 12 30 12 46 29 33 28 16 51 47 30 30 39 22 24 29 34 29 29 51 29 32 27 31 31 28 51 46 41 19 45 15 29 28 29 33 35 38 28 33 29 25 39 13 24 14 46 25 41 33 29 26 29 28 23 43 43 32 25 29 23 28 28 33 29 32 28 36 51 51 43 18 34 25 33 18 28 29 51 51 51 29 25 30 19 34 33 28 16 26 15 17 29 29 28 21 29 19 29 21 23 21 8 28 18 24 19 29 13 10 32 15 17 51 34 20 21 21 25 38 19 22 22 16 28 43 28 28 16 20 24 27 21 30 26 34 27 26 29 28 34 31 24 23 16 15 30 11 33 27 11 20 15 8 12 31 22 28 22 51 24 27 20 20 29 15 19 19 15 13 31 20 23 23 6 5 10 13 12 15 31 27 10 11 6 15 11 6 17 6 9 13 9 27 13 15 5 4 7 7 4 8 25 19 22 44 23 17 7 10 10 17 7 33 44 28 22 22 8 24 39 22 5 7 8 6 20 7 3 7 18 19 15 29 18 22 20 17 9 18 12 6 5 6 26 42 13 12 14 26 42 29 5 3 4 6 30 13 31 9 21 10 16 12 4 11 8 5 6 17 25 6 12 14 26 26 21 11 13 6 3 4 5 5 26 15 12 24 23 20 12 9 3 5 8 5 7 7 1 4 2 1 2 3 17	Open. Hide. 59 61 59 59 34 28 24 18 24 28 18 26 21 24 32 55 55 59 52 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 59 59 59 55 44 44 34 44 59 59 59 61 61 61 61 44 44 61 61 61 61 61 52 52 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 59 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 55 61 61 61 61 61 61 61 55 61 61 61 55 61 61 61 55 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 52 61 61 61 61 61 50 61 53 61 53 52 61 61 61 61 61 61 61 61 61 61 61 61 61 43 61 61 61 61 61 61 61 50 61 53 53 53 50 61 61 61 61 61 61 61 53 50 45 61 61 46 47 61 61 61 53 61 52 53 52 61 46 61 61 53 61 61 50 61 61 53 61 53 53 52 53 53 53 53 57 42 34 47 57 57 57 57 53 53 52 53 53 57 53 57 57 53 47 57 57 53 53 53 53 46 46 50 53 57 53 53 57 30 57 57 43 32 53 52 45 53 47 30 53 53 45 53 57 53 53 53 50 47 53 42 45 50 57 53 50 57 53 34 57 53 53 34 46 47 38 57 53 53 57 57 57 38 52 57 57 57 53 53 50 53 53 35 45 32 36 50 50 52 53 45 47 53 53 40 51 57 52 38 40 36 31 16 46 45 42 42 50 57 31 30 53 52 41 50 45 50 50 50 42 38 52 38 48 29 45 52 57 37 15 57 57 57 57 32 27 37 34 38 25 47 47 33 34 52 19 12 9 20 31 36 53 38 27 40 34 40 44 50 50 40 26 28 57 37 37 23 50 37 32 42 43 31 36 42 44 53 42 36 35 53 33 37 37 53 57 28 31 27 33 40 57 57 37 35 52 41 33 37 40 24 40 57 30 36 30 57 36 42 40 40 31 33 35 26 40 31 37 11 18 37 40 33 32 25 40 33 33 14 53 40 24 44 19 17 29 57 30 35 21 31 53 35 37 33 34 36 34 29 33 23 43 51 31 15 29 35 40 10 31 25 46 31 29 21 36 31 21 30 51 32 32 29 32 25 37 22 44 26 36 29 18 27 24 29 18 46 20 29 28 39 25 33 33 39 41 46 29 28 29 37 29 27 19 16 30 24 34 18 29 29 32 28 34 33 28 27 37 29 18 30 25 29 29 13 29 32 29 26 51 31 21 35 16 29 27 43 28 28 29 28 32 24 20 28 29 12 24 28 25 29 29 13 31 34 32 22 27 27 28 28 21 39 35 29 51 25 14 25 51 17 14 30 19 26 19 6 10 26 11 29 12 12 29 26 23 16 46 29 36 20 18 31 22 13 7 5 5 5 17 17 16 44 9 29 13 25 33 21 25 28 16 26 27 31 10 23 26 20 12 28 15 33 29 21 19 26 29 19 26 16 10 11 9 6 14 51 51 31 29 8 23 20 28 11 16 10 25 11 14 30 8 29 12 15 28 16 38 32 7 19 30 7 7 33 19 35 12 20 19 22 14 6 5 33 23 20 20 7 35 39 10 22 26 23 27 16 32 17 27 22 24 24 29 22 27 16 15 17 21 31 35 7 7 17 38 16 17 30 6 17 5 9 12 16 7 13 8 5 7 6 7 6 6 29 5 25 14 17 9 25 28 18 15 22 9 5 6 13 6 5 22 33 42 29 42 34 19 42 25 42 11 5 5 12 20 5 4 6 7 10 9 5 6 4 11 5 4 5 5 4 5 23 35 26 23 15 8 14 30 12 11 11 17 10 4 12 5 12 30 30 30 18 6 7 13 6 7 17 6 3 4 16 30 23 5 5 10 16 6 3 1 4 5 10 4 6 9 8 5 3 1 1 4 22 4 4 8 7 5 3 6 6 4 3 2 4 5 27 18 4 6 5 2 2 3 3 10 8 14 4 13 6 15 3 3 8 10 5 2 5 4 6 7 11 3 1 1 3 9 3 1 4 7 1 1 4 5 13 5 3 15 4 5 3 5 10 5 8 7 3 3 4 4 5 2 2 1 4 11

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_107040167_107041318
seq2: B6Ng01-085A03.b_46_1196

seq1  GAATTCAATTTAAAGGGCTCCTTGTGATTTCATTTCAAGGCATGGTATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTAAAGGGCTCCTTGTGATTTCATTTCAAGGCATGGTATAA  50

seq1  GCAACATGTCCAAGAATGTTGATAGTAAAGATGACCATTGCTAAAAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATGTCCAAGAATGTTGATAGTAAAGATGACCATTGCTAAAAGTTT  100

seq1  ATGTTGAAAGAAGCAGTCATAATTTGACCTAATTATGGGTTTCTAAACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGAAAGAAGCAGTCATAATTTGACCTAATTATGGGTTTCTAAACCT  150

seq1  TTGTAAAATCTTGGAAGTTTACCTTGTCAGTTTGGCCTAACTGCAATTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAATCTTGGAAGTTTACCTTGTCAGTTTGGCCTAACTGCAATTAG  200

seq1  TTTCTTTTATTTGAGGCAAAATGTACTTAAAACCTGCACTTAAAAAGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTATTTGAGGCAAAATGTACTTAAAACCTGCACTTAAAAAGGAT  250

seq1  GTAAAACAGTCAAAGAAGCATAACACTTAACCTCTATTCATCTAAAATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACAGTCAAAGAAGCATAACACTTAACCTCTATTCATCTAAAATAT  300

seq1  ATATTCCTTTGCAGAGAAAGCCTGGACAGTGTCAAATGAAACAAGCAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCTTTGCAGAGAAAGCCTGGACAGTGTCAAATGAAACAAGCAATT  350

seq1  AGTCGTTTTCTAACAGGGAGCAGTTCAAACTGTAACATCATGCCAGACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGTTTTCTAACAGGGAGCAGTTCAAACTGTAACATCATGCCAGACAT  400

seq1  GATTAAGAATGATACAGCACATCATCATTGTCAACACTATTCAGCCAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAGAATGATACAGCACATCATCATTGTCAACACTATTCAGCCAATG  450

seq1  TAAACCTTAGTTAGAAATGTACTTGTCAGAGAAAAATGCGCCTTTGATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTTAGTTAGAAATGTACTTGTCAGAGAAAAATGCGCCTTTGATTT  500

seq1  CTATTGCACTTTCCCAGTAATTGCTGTCATCAGTGGCAGGTTATTATTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGCACTTTCCCAGTAATTGCTGTCATCAGTGGCAGGTTATTATTAC  550

seq1  AGTTGAATAGAGTTTCAGTAATTACTTTTGCACAGATTCTAACAGCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAATAGAGTTTCAGTAATTACTTTTGCACAGATTCTAACAGCTTTT  600

seq1  AGATTGAAGGATATTCTGACAGTTTGAATACTCTTGACAACAATTACCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGAAGGATATTCTGACAGTTTGAATACTCTTGACAACAATTACCTT  650

seq1  TTTCCTGGTTAACACTGATTCAGGAAAATTAAAAATTAAATCTGTTCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGGTTAACACTGATTCAGGAAAATTAAAAATTAAATCTGTTCAGA  700

seq1  GGAAACACTTATGTATGTCACTAGTAAGTGTGTTGATATAAAAAATGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACACTTATGTATGTCACTAGTAAGTGTGTTGATATAAAAAATGTGT  750

seq1  AAATGGCAGAATGACTTAGATTTTTTTAAAGTTCTTTTTCACTCAAGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCAGAATGACTTAGATTTTTTTAAAGTTCTTTTTCACTCAAGTAT  800

seq1  TTTTGATAATCAGCATTTAGGGAGATACAGACCATGTTCATTAGTTTCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATAATCAGCATTTAGGGAGATACAGACCATGTTCATTAGTTTCAA  850

seq1  AGTAAATGATATGGAAAGTCTAAAACCAATCCTCAATCCAATTACTAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATGATATGGAAAGTCTAAAACCAATCCTCAATCCAATTACTAACA  900

seq1  GAAACCACTATATGGGGTTGATGAAAAATAGATATTCATGAGAACAGAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCACTATATGGGGTTGATGAAAAATAGATATTCATGAGAACAGAGC  950

seq1  ACATATTATTTATATGTTCATGTCTATGTCTACCTTCCTTAGATAAATAG  1000
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACATATTATTTATATGTTCATGTCTATGTCTACCTTCCTTAGAT-AATAG  999

seq1  ATGCCAAAGTACATTCACATTTCTACATCTGTCAGAG-AGTAAATATATG  1049
      |||||||||||||||||||||| |||||||||||||| |||||| || ||
seq2  ATGCCAAAGTACATTCACATTTTTACATCTGTCAGAGAAGTAAAAATTTG  1049

seq1  CTTTCTGCAATTTTGCATTTTATA-ATATTAACGTA-TCTGCTTTTAGAA  1097
      |||||||| |||||||| |||||| ||||||||||| ||| | |||||||
seq2  CTTTCTGC-ATTTTGCA-TTTATATATATTAACGTATTCTTCCTTTAGAA  1097

seq1  AATAGAGGTTAACTGT-GATTAACTGG-AATATTTGACTGAATCTACTTT  1145
      |||||||||||||||| |||||||||| |||||||||||| |||||||| 
seq2  AATAGAGGTTAACTGTGGATTAACTGGAAATATTTGACTG-ATCTACTT-  1145

seq1  GGTATGA  1152
       ||||||
seq2  -GTATGA  1151

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information