BAC Information

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BAC

Clone NameB6Ng01-086A24
ChromosomeX (Build37)
Map Location 135,149,196 - 135,259,426
singlet/doubletdoublet
Overlap geneIl1rapl2
Upstream gene1700025D03Rik
Downstream geneNrk, Serpina7, 4930513O06Rik, 4933428M09Rik, Mum1l1, LOC675062, Trap1a, C330013F16Rik, EG666359, D330045A20Rik, Rnf128, LOC622432, Tbc1d8b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086A24.bB6Ng01-086A24.g
ACCDH899562DH899563
length1,010403
definitionDH899562|Mus musculus domesticus DNA, BAC clone: B6Ng01-086A24, 5' end.DH899563|Mus musculus domesticus DNA, BAC clone: B6Ng01-086A24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(135,149,196 - 135,149,726)(135,259,018 - 135,259,426)
sequence
gaattcatttagtgttgttcatacatacacatacccattcatgaacttat
ccctggaggaatctaattttcactctccacagccattgatcatctatagc
gcttcatttagggacaggaccatgtcaaattccccctgtccacactggaa
tgtccactagtgttgtcattatgccattcttgttcaggcaacaatattgt
tgaaatctcatcagtttcttttatctatcatgtataggagacattatcaa
ctaatgttctgtattcttacagtctttccacttcattttctatgatttta
ctcccttgatcactgatagttttgtatattttgcaagctttgtaaatcct
caaggcaggaaaagtggccagggcccagcctgagggacttcagcaaccag
acccctcccctagacctcactaacagacataactgtcacaaaggtcatct
ccactccctcaacaagaccctccccagtttatactaattattggtaaaaa
gttgaacaaaagctaccaatccttaaataggaattcaactttaggaatta
attcctgaacttcccacaaaaacacaccaatctctgaacaggaaaaccca
ccaattccccaagctcaggacttgaatttccaccaaacctcactctggaa
agctccaccctagaatgtttcacctcctccaacatcccccacccaagaac
ccctatataagcactgtgctatgtccaattaacagctgctgtctgctccc
tcctgggagaataggcagtcattcctggattcctccctctacatcctggt
gtgactctctaatctgaagaagccaagaagcaataaagaaaaggaagaaa
gggaagggcagggctgagttctcagctcagctggggatttgctcccctgg
gagctacaaagctgctgatgaggaagcttctctgaactgtgtggttcctg
ggttcctgtgtctcagatgcccttcactgggacactgtcccactctgagt
gtgtggttcc
agtgattttgagctgaaccttatatggtgttcacacttgtttaaaatgaa
caaacaaacaaacaaacaaacaaacaaacaaaattccttccttagcctga
aatccttcactttcatttttagaagacatttgaccataatttctatgttt
taattttcaccactaattttgattatatagaacatcattgccttcttccc
actttcccttccaaaactatgtttgaagagctggtttatgccaaatgctt
tcatgtggatcatgtctctagctgcatatgtagcagaagatggcctagta
ggccatcattggaaagagaagccccttggtattgcaaactttatatgccc
aagtacaggggaatgccagggctaagaagtgggagtgggtgggtagggga
gta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_135149196_135149726
seq2: B6Ng01-086A24.b_33_563

seq1  GAATTCATTTAGTGTTGTTCATACATACACATACCCATTCATGAACTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTAGTGTTGTTCATACATACACATACCCATTCATGAACTTAT  50

seq1  CCCTGGAGGAATCTAATTTTCACTCTCCACAGCCATTGATCATCTATAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGAGGAATCTAATTTTCACTCTCCACAGCCATTGATCATCTATAGC  100

seq1  GCTTCATTTAGGGACAGGACCATGTCAAATTCCCCCTGTCCACACTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATTTAGGGACAGGACCATGTCAAATTCCCCCTGTCCACACTGGAA  150

seq1  TGTCCACTAGTGTTGTCATTATGCCATTCTTGTTCAGGCAACAATATTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCACTAGTGTTGTCATTATGCCATTCTTGTTCAGGCAACAATATTGT  200

seq1  TGAAATCTCATCAGTTTCTTTTATCTATCATGTATAGGAGACATTATCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCTCATCAGTTTCTTTTATCTATCATGTATAGGAGACATTATCAA  250

seq1  CTAATGTTCTGTATTCTTACAGTCTTTCCACTTCATTTTCTATGATTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTTCTGTATTCTTACAGTCTTTCCACTTCATTTTCTATGATTTTA  300

seq1  CTCCCTTGATCACTGATAGTTTTGTATATTTTGCAAGCTTTGTAAATCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTGATCACTGATAGTTTTGTATATTTTGCAAGCTTTGTAAATCCT  350

seq1  CAAGGCAGGAAAAGTGGCCAGGGCCCAGCCTGAGGGACTTCAGCAACCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAGGAAAAGTGGCCAGGGCCCAGCCTGAGGGACTTCAGCAACCAG  400

seq1  ACCCCTCCCCTAGACCTCACTAACAGACATAACTGTCACAAAGGTCATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTCCCCTAGACCTCACTAACAGACATAACTGTCACAAAGGTCATCT  450

seq1  CCACTCCCTCAACAAGACCCTCCCCAGTTTATACTAATTATTGGTAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCCTCAACAAGACCCTCCCCAGTTTATACTAATTATTGGTAAAAA  500

seq1  GTTGAACAAAAGCTACCAATCCTTAAATAGG  531
      |||||||||||||||||||||||||||||||
seq2  GTTGAACAAAAGCTACCAATCCTTAAATAGG  531

seq1: chrX_135259018_135259426
seq2: B6Ng01-086A24.g_68_476 (reverse)

seq1  TACTCCCCTACCCACCCACTCCCACTTCTTAGCCCTGGCATTCCCCTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCCCTACCCACCCACTCCCACTTCTTAGCCCTGGCATTCCCCTGTA  50

seq1  CTTGGGCATATAAAGTTTGCAATACCAAGGGGCTTCTCTTTCCAATGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGCATATAAAGTTTGCAATACCAAGGGGCTTCTCTTTCCAATGATG  100

seq1  GCCTACTAGGCCATCTTCTGCTACATATGCAGCTAGAGACATGATCCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACTAGGCCATCTTCTGCTACATATGCAGCTAGAGACATGATCCACA  150

seq1  TGAAAGCATTTGGCATAAACCAGCTCTTCAAACATAGTTTTGGAAGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCATTTGGCATAAACCAGCTCTTCAAACATAGTTTTGGAAGGGAA  200

seq1  AGTGGGAAGAAGGCAATGATGTTCTATATAATCAAAATTAGTGGTGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAAGAAGGCAATGATGTTCTATATAATCAAAATTAGTGGTGAAAA  250

seq1  TTAAAACATAGAAATTATGGTCAAATGTCTTCTAAAAATGAAAGTGAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACATAGAAATTATGGTCAAATGTCTTCTAAAAATGAAAGTGAAGG  300

seq1  ATTTCAGGCTAAGGAAGGAATTTTGTTTGTTTGTTTGTTTGTTTGTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGGCTAAGGAAGGAATTTTGTTTGTTTGTTTGTTTGTTTGTTTGT  350

seq1  TTGTTCATTTTAAACAAGTGTGAACACCATATAAGGTTCAGCTCAAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCATTTTAAACAAGTGTGAACACCATATAAGGTTCAGCTCAAAATC  400

seq1  ACTGAATTC  409
      |||||||||
seq2  ACTGAATTC  409