BAC Information

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BAC

Clone NameB6Ng01-086B04
ChromosomeX (Build37)
Map Location 64,191,576 - 64,331,918
singlet/doubletdoublet
Overlap geneLOC627734
Upstream geneLOC671840, Slitrk2, LOC666824
Downstream geneEG666828, Gm1140, LOC666842, LOC619873, 4933436I01Rik, LOC100040194
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086B04.bB6Ng01-086B04.g
ACCDH899570DH899571
length6331,147
definitionDH899570|Mus musculus domesticus DNA, BAC clone: B6Ng01-086B04, 5' end.DH899571|Mus musculus domesticus DNA, BAC clone: B6Ng01-086B04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,191,576 - 64,192,208)(64,330,765 - 64,331,918)
sequence
gaattctattctgttcataaattcatgaattttattaattttattgatgt
aaagatttgcagtacattttcttttaggatattaattatagtgtctaaga
ggactctggagtcacctagaacaggaagaaaatcacaactctgtcactta
gctgatatgtaatctggaggaagttactgtaactaaatgggcaccaggtt
tatttcatattaaatgttgataaataataataatgctacttgaggattat
taagaggattaactaaaatatgcttagcatattgaaagtgttagatgaac
aattactatcgttactaattggtgccttatctaggatgtctcccagctca
gtatttgctcatgcattccctgtacgggctttcagtcccagtatatgtgc
tgaagcaagaatttgcctaaggtttctgtatatcttttaaaatcatgttc
tatgagataatagacaatctttagctaagggtgcttagaaatacaacaag
ctctattaggactgagagaatatgaagttctatgtgataattaatctcag
gtgtcaacttcatatttgttcaagaatcagtgtatttgcatctttgtgtg
gtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattccactgttgatccaattagactaggacaggagtgagaaaatattt
atcatgctaaatcatagcttctggaatcacccattagaaaactctacaaa
ctgttcaatctacataactgtggacacatttgtaaatttaggaacataaa
tcctacactataggtctaatgaaagaaataacacataaaatgtctagctc
agtgtcttgaaaattgtaaacacttaatacatgtaatgatctgcacctcc
aacttggcataccaattatttgtaacttcggaatctcttttttcttggta
ttttttgaaaatagtgtttttctgtagcagcaatattgaccttttagact
gattctaagctgcattaaagtgttgcaggcacatataaattgtcctgtgg
tttatttttaaataaacagaagctaaggctatttcagccactgaaaaagc
tcaacagtgccttaatttctactgctctcagaaaccacaaacaatcttct
tctgtgggggaagaaaactgtgtcactcaatttggtaattatgtcgcttg
cctatgttgatttcaatgtgaattatttcaattttcaaaaaaaaaaaaaa
aagaaagaaagctattcacatttaacatcacagaactgaacagaatgtag
gctggaactaaatacagttttatatctgcagccagaaaatgattgaggcc
tattttggactcctgtgttctgtttgtaatagcaccatttttcccttaat
tgttccagcaaagacacactcttacaaaacagctgtagctcctataaaat
ccagtggaataaaagacatgctcaggtaaccaattcattattttagaaac
gcattgcaagctctgacaaataattatacagagagtcacactgctaaaat
tcactgataggcttcatgtgcagataaacaacatatcagaaggagacagt
gtaatggttttgttctatcatccatttgtcgatgcttgtagtgtgcagag
tactagagcctatctctacgtgatctacaactcaacaaaagcatggaaat
ggaggaaatttggaggtctagtttttgtcgatttcattctcctcttaaaa
aaataccacaaacttgtactgcttattattagcaattgttactctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_64191576_64192208
seq2: B6Ng01-086B04.b_46_678

seq1  GAATTCTATTCTGTTCATAAATTCATGAATTTTATTAATTTTATTGATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTCTGTTCATAAATTCATGAATTTTATTAATTTTATTGATGT  50

seq1  AAAGATTTGCAGTACATTTTCTTTTAGGATATTAATTATAGTGTCTAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTTGCAGTACATTTTCTTTTAGGATATTAATTATAGTGTCTAAGA  100

seq1  GGACTCTGGAGTCACCTAGAACAGGAAGAAAATCACAACTCTGTCACTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCTGGAGTCACCTAGAACAGGAAGAAAATCACAACTCTGTCACTTA  150

seq1  GCTGATATGTAATCTGGAGGAAGTTACTGTAACTAAATGGGCACCAGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATATGTAATCTGGAGGAAGTTACTGTAACTAAATGGGCACCAGGTT  200

seq1  TATTTCATATTAAATGTTGATAAATAATAATAATGCTACTTGAGGATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCATATTAAATGTTGATAAATAATAATAATGCTACTTGAGGATTAT  250

seq1  TAAGAGGATTAACTAAAATATGCTTAGCATATTGAAAGTGTTAGATGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGATTAACTAAAATATGCTTAGCATATTGAAAGTGTTAGATGAAC  300

seq1  AATTACTATCGTTACTAATTGGTGCCTTATCTAGGATGTCTCCCAGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTATCGTTACTAATTGGTGCCTTATCTAGGATGTCTCCCAGCTCA  350

seq1  GTATTTGCTCATGCATTCCCTGTACGGGCTTTCAGTCCCAGTATATGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGCTCATGCATTCCCTGTACGGGCTTTCAGTCCCAGTATATGTGC  400

seq1  TGAAGCAAGAATTTGCCTAAGGTTTCTGTATATCTTTTAAAATCATGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAAGAATTTGCCTAAGGTTTCTGTATATCTTTTAAAATCATGTTC  450

seq1  TATGAGATAATAGACAATCTTTAGCTAAGGGTGCTTAGAAATACAACAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGATAATAGACAATCTTTAGCTAAGGGTGCTTAGAAATACAACAAG  500

seq1  CTCTATTAGGACTGAGAGAATATGAAGTTCTATGTGATAATTAATCTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTAGGACTGAGAGAATATGAAGTTCTATGTGATAATTAATCTCAG  550

seq1  GTGTCAACTTCATATTTGTTCAAGAATCAGTGTATTTGCATCTTTGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAACTTCATATTTGTTCAAGAATCAGTGTATTTGCATCTTTGTGTG  600

seq1  GTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  633
      |||||||||||||||||||||||||||||||||
seq2  GTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  633

seq1: chrX_64330765_64331918
seq2: B6Ng01-086B04.g_69_1215 (reverse)

seq1  TCAGAGTAACAAATTGCTAATTAATAAGCAGTACAAGTTTGTGGTAATTT  50
      |||||||||| ||||||||| ||||||||||||||||||||||||| |||
seq2  TCAGAGTAAC-AATTGCTAA-TAATAAGCAGTACAAGTTTGTGGTATTTT  48

seq1  TTTTAGA-GAGAATGAAATCTGACAAAAACTAGACCT-CAAATTTTCTCC  98
      ||| ||| |||||||||||| |||||||||||||||| ||||||| ||||
seq2  TTTAAGAGGAGAATGAAATC-GACAAAAACTAGACCTCCAAATTTCCTCC  97

seq1  ATTTCCATGCTTTTGTTGAGTTGTAGATCACGTAGAGATAGGCTCTAGTA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATGCTTTTGTTGAGTTGTAGATCACGTAGAGATAGGCTCTAGTA  147

seq1  CTCTGCACACTACAAGCATCGAACAAATGGATTGATAGAACAAAACCATT  198
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  CTCTGCACACTACAAGCATCG-ACAAATGGA-TGATAGAACAAAACCATT  195

seq1  ACACTGTTCTCCTTTCTGATATGTTGTTTATCTGCACATGAAGCCTATCA  248
      |||||| ||||| |||||||||||||||||||||||||||||||||||||
seq2  ACACTG-TCTCC-TTCTGATATGTTGTTTATCTGCACATGAAGCCTATCA  243

seq1  GTGAATTTTTAGCAGTGTGACTCTCTGTATAATTATTTTGTCAGAGCTTG  298
      ||||| ||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTGAA-TTTTAGCAGTGTGACTCTCTGTATAATTA-TTTGTCAGAGCTTG  291

seq1  CAATGCGTTTCTAAAATAATGAATTGGTTACCTGAGCATGTCTTTTATTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCGTTTCTAAAATAATGAATTGGTTACCTGAGCATGTCTTTTATTC  341

seq1  CACTGGATTTTATAGGAGCTACAGCTGTTTTGTAAGAGTGTGTCTTTGCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGATTTTATAGGAGCTACAGCTGTTTTGTAAGAGTGTGTCTTTGCT  391

seq1  GGAACAATTAAGGGAAAAATGGTGCTATTACAAACAGAACACAGGAGTCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAATTAAGGGAAAAATGGTGCTATTACAAACAGAACACAGGAGTCC  441

seq1  AAAATAGGCCTCAATCATTTTCTGGCTGCAGATATAAAACTGTATTTAGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGGCCTCAATCATTTTCTGGCTGCAGATATAAAACTGTATTTAGT  491

seq1  TCCAGCCTACATTCTGTTCAGTTCTGTGATGTTAAATGTGAATAGCTTTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCTACATTCTGTTCAGTTCTGTGATGTTAAATGTGAATAGCTTTC  541

seq1  TTTCTTTTTTTTTTTTTTTTGAAAATTGAAATAATTCACATTGAAATCAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTTTTTTTTTTTTGAAAATTGAAATAATTCACATTGAAATCAA  591

seq1  CATAGGCAAGCGACATAATTACCAAATTGAGTGACACAGTTTTCTTCCCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGCAAGCGACATAATTACCAAATTGAGTGACACAGTTTTCTTCCCC  641

seq1  CACAGAAGAAGATTGTTTGTGGTTTCTGAGAGCAGTAGAAATTAAGGCAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAGAAGATTGTTTGTGGTTTCTGAGAGCAGTAGAAATTAAGGCAC  691

seq1  TGTTGAGCTTTTTCAGTGGCTGAAATAGCCTTAGCTTCTGTTTATTTAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGCTTTTTCAGTGGCTGAAATAGCCTTAGCTTCTGTTTATTTAAA  741

seq1  AATAAACCACAGGACAATTTATATGTGCCTGCAACACTTTAATGCAGCTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACCACAGGACAATTTATATGTGCCTGCAACACTTTAATGCAGCTT  791

seq1  AGAATCAGTCTAAAAGGTCAATATTGCTGCTACAGAAAAACACTATTTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCAGTCTAAAAGGTCAATATTGCTGCTACAGAAAAACACTATTTTC  841

seq1  AAAAAATACCAAGAAAAAAGAGATTCCGAAGTTACAAATAATTGGTATGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATACCAAGAAAAAAGAGATTCCGAAGTTACAAATAATTGGTATGC  891

seq1  CAAGTTGGAGGTGCAGATCATTACATGTATTAAGTGTTTACAATTTTCAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTGGAGGTGCAGATCATTACATGTATTAAGTGTTTACAATTTTCAA  941

seq1  GACACTGAGCTAGACATTTTATGTGTTATTTCTTTCATTAGACCTATAGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGAGCTAGACATTTTATGTGTTATTTCTTTCATTAGACCTATAGT  991

seq1  GTAGGATTTATGTTCCTAAATTTACAAATGTGTCCACAGTTATGTAGATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGATTTATGTTCCTAAATTTACAAATGTGTCCACAGTTATGTAGATT  1041

seq1  GAACAGTTTGTAGAGTTTTCTAATGGGTGATTCCAGAAGCTATGATTTAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGTTTGTAGAGTTTTCTAATGGGTGATTCCAGAAGCTATGATTTAG  1091

seq1  CATGATAAATATTTTCTCACTCCTGTCCTAGTCTAATTGGATCAACAGTG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATAAATATTTTCTCACTCCTGTCCTAGTCTAATTGGATCAACAGTG  1141

seq1  GAATTC  1154
      ||||||
seq2  GAATTC  1147