BAC Information

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BAC

Clone NameB6Ng01-087H07
ChromosomeX (Build37)
Map Location 159,225,622 - 159,226,754
singlet/doubletsinglet
Overlap gene4932441K18Rik
Upstream geneGm47, Nhs, Reps2, LOC654358, LOC100041557, LOC667630, Rbbp7
Downstream geneLOC671250, Syap1, LOC100041607, Ctps2, S100g, LOC100040610, EG637051, Grpr, 1700045I19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087H07.bB6Ng01-087H07.g
ACCDH900578DH900579
length1,119857
definitionDH900578|Mus musculus domesticus DNA, BAC clone: B6Ng01-087H07, 5' end.DH900579|Mus musculus domesticus DNA, BAC clone: B6Ng01-087H07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttccatcacttcatgaagacaggaacacaatgggagaggaaat
ataagaacacaacactctgcttatcctgcgttcctattcatagcacatag
ctaagaacattaggtctttctgtctctgcacctaaagtagtttgacatca
cctgcaagagtactgccctctggtcagcctcgttggagctgggcatcatc
tcaagacaaagaagagctcaaactaacagatctgtacatacacagcactt
tttctgcccattccctaccattaaattttgctaaattcatcagttgaagg
cagcatctgacaacttaaatgacatgagtcaaagccaagctaatgtgtga
cactaggtaaatttctgtcctgctaaatctcaatgccaatatgtgatata
atcatacccagatttgctgagctctaagtagttcaacttcactcataagg
tgcttggtgccatacagacatttggcaaaagcttgcatttctaagaactg
gtaagtggctatctatatacactaaagccatcaaaacatgcatgccttct
tggacctagaggattaggattcttccagttacggtatgatatgtgacagg
gagaatcctaatgggcgatgagcctaggtattaagaacatggcaatgatt
tcttcacatatgaatatgaacatgtcatggtattagtcacaaataacagg
attcaaatagggttttataacttcctacatctatgaggaagcagacagcc
tattaataaaaccaaaagcatcataagaaaatggggggggggcctagaca
gatggctcagcagttaagaacacatggctgctcttccagaggacccatgt
tcaattcccagtacccacgtggcagcttgcaactgtcttgtaactccagt
tccagaggctctgacaccctcatacagacacatatggaggcaagcataat
gcacatgaatttgaaaaaaagaaaagaaaattagggctaggccctgcctt
aatcccagtaggagatctttgtaactcaaggcagtctagactatatggca
agctccagacagccaggatacgacaaaaccacaaagaaaatcaggtcttt
atattaatcataatttatc

gaattcagcctgagacccatatggtagaaagagaacaaaccaccataagt
tgttttctgactgccacatactttccgtggagtgtgcacacacaaataag
taaataaaatacaagtacatacaaaaaaatttaaagtgaatacttttttg
gtgtgtgtgtgtgtatgtgtgtgtgtgatataggtatgcgttcctgtgga
tattggacatataaacacaaaagtgtgcatgtggaggccagagatgtctt
gttcaattgctctgaacctgaatttgtctcctgatgaaactggaaatcac
cccttctgctaggctagttagccaaagagctccagggacagctccatctg
tctctgcttcatgtgtactagagtttcgggtgcttagcaccacaactggc
ttttttacctgggtgctgggggatgcaaactcacttctccatgattatat
gatcatattactgaacaagaaacatctaaccccttgtttttcttggtttt
tgttttgaccttgttcttttgagatcaggtcccatgtagcccaggcttgt
cttgaagttgtagttgctaaaaagtggggtcttgtgtagccaagccagcc
tcagactatgcagctgacgaaagctggccttaatttctccctgaagcccc
atttctcctgtctcatctctcaagttctgggattataggcatgtgctacc
aagcccggtattaatgacctttaaaaaaaaaaaaactaatttaaacatat
caaaatgcctggctggctgtgctgactcaaacctatatcacagaacttcg
gagttgaaatggattaatgtgaatcgagggcgcctgggctacacagtgag
tggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_159225622_159226754
seq2: B6Ng01-087H07.b_43_1161

seq1  GAATTCCTTCCATCACTTCATGAAGACAGGAACACAATGGGAGAGGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCATCACTTCATGAAGACAGGAACACAATGGGAGAGGAAAT  50

seq1  ATAAGAACACAACACTCTGCTTATCCTGCGTTCCTATTCATAGCACATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAACACAACACTCTGCTTATCCTGCGTTCCTATTCATAGCACATAG  100

seq1  CTAAGAACATTAGGTCTTTCTGTCTCTGCACCTAAAGTAGTTTGACATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAACATTAGGTCTTTCTGTCTCTGCACCTAAAGTAGTTTGACATCA  150

seq1  CCTGCAAGAGTACTGCCCTCTGGTCAGCCTCGTTGGAGCTGGGCATCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAAGAGTACTGCCCTCTGGTCAGCCTCGTTGGAGCTGGGCATCATC  200

seq1  TCAAGACAAAGAAGAGCTCAAACTAACAGATCTGTACATACACAGCACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACAAAGAAGAGCTCAAACTAACAGATCTGTACATACACAGCACTT  250

seq1  TTTCTGCCCATTCCCTACCATTAAATTTTGCTAAATTCATCAGTTGAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCCCATTCCCTACCATTAAATTTTGCTAAATTCATCAGTTGAAGG  300

seq1  CAGCATCTGACAACTTAAATGACATGAGTCAAAGCCAAGCTAATGTGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCTGACAACTTAAATGACATGAGTCAAAGCCAAGCTAATGTGTGA  350

seq1  CACTAGGTAAATTTCTGTCCTGCTAAATCTCAATGCCAATATGTGATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGGTAAATTTCTGTCCTGCTAAATCTCAATGCCAATATGTGATATA  400

seq1  ATCATACCCAGATTTGCTGAGCTCTAAGTAGTTCAACTTCACTCATAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATACCCAGATTTGCTGAGCTCTAAGTAGTTCAACTTCACTCATAAGG  450

seq1  TGCTTGGTGCCATACAGACATTTGGCAAAAGCTTGCATTTCTAAGAACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGTGCCATACAGACATTTGGCAAAAGCTTGCATTTCTAAGAACTG  500

seq1  GTAAGTGGCTATCTATATACACTAAAGCCATCAAAACATGCATGCCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTGGCTATCTATATACACTAAAGCCATCAAAACATGCATGCCTTCT  550

seq1  TGGACCTAGAGGATTAGGATTCTTCCAGTTACGGTATGATATGTGACAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCTAGAGGATTAGGATTCTTCCAGTTACGGTATGATATGTGACAGG  600

seq1  GAGAATCCTAATGGGCGATGAGCCTAGGTATTAAGAACATGGCAATGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCCTAATGGGCGATGAGCCTAGGTATTAAGAACATGGCAATGATT  650

seq1  TCTTCACATATGAATATGAACATGTCATGGTATTAGTCACAAATAACAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACATATGAATATGAACATGTCATGGTATTAGTCACAAATAACAGG  700

seq1  ATTCAAATAGGGTTTTATAACTTCCTACATCTATGAGGAAGCAGACAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATAGGGTTTTATAACTTCCTACATCTATGAGGAAGCAGACAGCC  750

seq1  TATTAATAAAACCAAAAGCATCATAAGAAAATGGGGGGGGGGCCTAGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATAAAACCAAAAGCATCATAAGAAAATGGGGGGGGGGCCTAGACA  800

seq1  GATGGCTCAGCAGTTAAGAACACATGGCTGCTCTTCCAGAGGACCCATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTCAGCAGTTAAGAACACATGGCTGCTCTTCCAGAGGACCCATGT  850

seq1  TCAATTCCCAGTACCCACGTGGCAGCTTGCAACTGTCTTGTAACTCCAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCCCAGTACCCACGTGGCAGCTTGCAACTGTCTTGTAACTCCAGT  900

seq1  TCCAGAGGCTCTGACACCCTCATACAGACACATATGGAGGCAAGCAATAA  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCCAGAGGCTCTGACACCCTCATACAGACACATATGGAGGCAAGC-ATAA  949

seq1  TGCACATGAATTTGAAAAAAAGAAAAGAAAATTAGGGCTAGGCCCCTGCC  1000
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGCACATGAATTTGAAAAAAAGAAAAGAAAATTAGGGCTAGG-CCCTGCC  998

seq1  TTAATCCCAGTAGGAAGATCTTTGTAAACTCAAGGGCAGTCTAGACTATA  1050
      |||||||||||||| |||||||||| ||||||| ||||||||||||||||
seq2  TTAATCCCAGTAGG-AGATCTTTGT-AACTCAA-GGCAGTCTAGACTATA  1045

seq1  TGGCAAGCTCCAGGACAGCCAGGATTACAGACAAAACCAACAAAGAAAAT  1100
      |||||||||||| ||||||||||| ||| ||||||||| |||||||||||
seq2  TGGCAAGCTCCA-GACAGCCAGGA-TAC-GACAAAACC-ACAAAGAAAAT  1091

seq1  CAGGTCTTTAATAATTTAATCATAAATTTTATC  1133
      ||||||||| |||  ||||||||||  ||||||
seq2  CAGGTCTTT-ATA--TTAATCATAA--TTTATC  1119


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