MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-087O16
Chromosome	X (Build37)
Map Location	127,149,026 - 127,149,847
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Diap2, LOC100040092, LOC665773
Downstream gene	LOC665799, LOC670449
Link	Open Mouse BAC browser

Click to get alignment info.

name	Diap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54004 MGI:1858500
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040092 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040092
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC665773 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665773
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins pseudo : _no_value

name	LOC665799 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665799
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC670449 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670449
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Diap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130794 GeneID:54004 MGI:1858500
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : diaphanous homolog 2 (Drosophila) transcript_id : NM_017398.2

name	LOC670449 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272262 GeneID:670449
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to retinitis pigmentosa GTPase regulator transcript_id : XM_001475063.1

name	Diap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27777634 GeneID:54004 MGI:1858500
definition	GO_function : GO:0003779 - actin binding [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0017048 - Rho GTPase binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IEA]; GO:0030041 - actin filament polymerization [Evidence IDA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0016043 - cell organization and biogenesis [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0048477 - oogenesis [Evidence IEA] codon_start : 1 product : diaphanous homolog 2 protein_id : NP_059094.1

name	LOC670449 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272263 GeneID:670449
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475113.1

name	LOC100040092 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040092
definition	number : 1 pseudo : _no_value

name	LOC665799 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665799
definition	number : 3 pseudo : _no_value

name	LOC665799 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665799
definition	number : 2 pseudo : _no_value

name	LOC665799 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665799
definition	number : 1 pseudo : _no_value

name	LOC665773 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272259 GeneID:665773
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins product : similar to prohibitin pseudo : _no_value transcript_id : XR_032015.1

clone name	MSMg01-457N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504N14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-130P01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-451J22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-234J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341O12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-410P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278O19
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-087O16.b	B6Ng01-087O16.g
ACC	DH900912	DH900913
length	1,204	1,160
definition	DH900912\|Mus musculus domesticus DNA, BAC clone: B6Ng01-087O16, 5' end.	DH900913\|Mus musculus domesticus DNA, BAC clone: B6Ng01-087O16, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattccaaatgttgaacatcacaacctaatgtcaaaggattttcattgc ccccacaatgaaacctcatcaattcaacagttattcctcattccttctct tcccctacctatgataataccaaactgacttctatgtattatgcattctt tttgtctaaatatttcacacaaataggttcgtagtacatgtgaatttctt atattttttggttgtaagcctagcctttaatggctgagccatctctctag cccacatgcgaatttctatgtgacttctttgacacagaaaattttctaga ctgatacagcacatagcatgtaatcagcactgtacttcttttatggctat gtaatatttccatgtctgtatatatcatattttattttatcttgagtata aacttaggaaccaaattgctaggctattacatgattctatcattaactta ttgagtatctttgaaagccatacaattttatattgcaactgacagtgtgt gaggtatctcatttctctgcatctttaacattacttggtacctttgtttc tgttattttggactttgtttgtttgtttgtttgtttgttttcaaaatcta gtcatccagggaatgtgaaatgatatctcattattatttggattttttca tttccttaatgcctaacatgactgaacacctttccaagtgctttctgttg ctgtttaccttcttttaagaaactccttttaagaaattcaagttcattgt ctattttttattaatcttttattgttgagttttgaggagtctgttatata ttttggatatgagtatcttaacagtcaaatgtcttgcaaatatttttctt ctgttataatatggtcagttttttcatcataaattattttattgtctttt ctcaagatatatttcagacatcctgttttgctcttgatttgagacatgac cacatactgcttctatgggaaagaaattgattctagaatgttgtttgttt aggaaatcagtagcaccttagcagctagtacagtgaagctaatggcagcc ttcttcatttttctgtttctgaaataagaatgacttatagaaagtcaggc cactgaattcattctgaacatatttcctagagaactacctaaacctgtgt tgcttcagcctaagagaatttgggagtgtgttattcaagtaagttaacgt tttc	gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccaccttacaccagtcagaatggctaagatcaaaaattcaggtgacagc agatgctggcgaggatgtagagaaagaggaacactcttccattgttggtg ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc atatatccagaagatgccccaacaggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaagaacctagat gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa gaaactcacacaatatgtattcactgataagtggatattagccccaaacc taggatacccaagatataagatataatttgctaaacacatgaaactcaag gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa caaaacacccatggaaggagttacagagacggagtttggagctgagatga aaggagggaccatgtagagactgccatagccagggatccaccccataatc agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa ggacgcagatgtagctgtctcttgtgagactatgcccgggcccagcaaac acagaagtggatgctcacagtcagctaatggatggatcatagggctccca tggaggagctagagaaagtagccagagctaaaggatctgcaccctatagg tggaacacatatgagctacagtacccggagctcttgactctagctgcata tatatcaaagatgcctagtcgtccatccctgaagagagtcatagggcttg caaacctttatatgcccagtacaggaaattccaggcccaaaaggggggat tggggtggca
quality values	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chrX_127149026_127149847
seq2: B6Ng01-087O16.b_429_1251

seq1  TTATTTTATCTTGAGTATAAACTTAGGAACCAAATTGCTAGGCTATTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATCTTGAGTATAAACTTAGGAACCAAATTGCTAGGCTATTACA  50

seq1  TGATTCTATCATTAACTTATTGAGTATCTTTGAAAGCCATACAATTTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTATCATTAACTTATTGAGTATCTTTGAAAGCCATACAATTTTAT  100

seq1  ATTGCAACTGACAGTGTGTGAGGTATCTCATTTCTCTGCATCTTTAACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAACTGACAGTGTGTGAGGTATCTCATTTCTCTGCATCTTTAACAT  150

seq1  TACTTGGTACCTTTGTTTCTGTTATTTTGGACTTTGTTTGTTTGTTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGGTACCTTTGTTTCTGTTATTTTGGACTTTGTTTGTTTGTTTGTT  200

seq1  TGTTTGTTTTCAAAATCTAGTCATCCAGGGAATGTGAAATGATATCTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTTCAAAATCTAGTCATCCAGGGAATGTGAAATGATATCTCAT  250

seq1  TATTATTTGGATTTTTTCATTTCCTTAATGCCTAACATGACTGAACACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTGGATTTTTTCATTTCCTTAATGCCTAACATGACTGAACACCT  300

seq1  TTCCAAGTGCTTTCTGTTGCTGTTTACCTTCTTTTAAGAAACTCCTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGTGCTTTCTGTTGCTGTTTACCTTCTTTTAAGAAACTCCTTTTA  350

seq1  AGAAATTCAAGTTCATTGTCTATTTTTTATTAATCTTTTATTGTTGAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTCAAGTTCATTGTCTATTTTTTATTAATCTTTTATTGTTGAGTT  400

seq1  TTGAGGAGTCTGTTATATATTTTGGATATGAGTATCTTAACAGTCAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGAGTCTGTTATATATTTTGGATATGAGTATCTTAACAGTCAAATG  450

seq1  TCTTGCAAATATTTTTCTTCTGTTATAATATGGTCAGTTTTTTCATCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCAAATATTTTTCTTCTGTTATAATATGGTCAGTTTTTTCATCATA  500

seq1  AATTATTTTATTGTCTTTTCTCAAGATATATTTCAGGACATCCTGTTTTG  550
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AATTATTTTATTGTCTTTTCTCAAGATATATTTCA-GACATCCTGTTTTG  549

seq1  CTCTTGATTTGAGACATGACCACATACTGCTTCTATGGGAAAGAAATTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGATTTGAGACATGACCACATACTGCTTCTATGGGAAAGAAATTGA  599

seq1  TTCTAGAATGTTGTTTGTTTTAGGAAATCAGTAGCACCTTAGCAGCTAGT  650
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTCTAGAATGTTGTTTG-TTTAGGAAATCAGTAGCACCTTAGCAGCTAGT  648

seq1  AACAGTGAAGCTAATGGCAGCCCTC-TCA-TTTTCTG-TTCTGAAATAAG  697
       ||||||||||||||||||||| || ||| ||||||| ||||||||||||
seq2  -ACAGTGAAGCTAATGGCAGCCTTCTTCATTTTTCTGTTTCTGAAATAAG  697

seq1  AATGACCTATAGAAAAGTCA-GCCACTG-ATTCATTCTGAACATATATCA  745
      |||||| ||||| ||||||| ||||||| ||||||||||||||||| || 
seq2  AATGACTTATAG-AAAGTCAGGCCACTGAATTCATTCTGAACATATTTCC  746

seq1  TAAGAAACTA-CTAAACTTGTGTTGCTTCAGGCTACAGAG-ATTTGGAAG  793
      ||   ||||| |||||| ||||||||||||| ||| |||| |||||| ||
seq2  TAGAGAACTACCTAAACCTGTGTTGCTTCAGCCTA-AGAGAATTTGGGAG  795

seq1  T-TGTTATTTCAATGTAAGTTAACCTTTTC  822
      | ||||| ||||| |||||||||| |||||
seq2  TGTGTTA-TTCAA-GTAAGTTAACGTTTTC  823

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information