BAC Information

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BAC

Clone NameB6Ng01-089K17
ChromosomeX (Build37)
Map Location 113,716,599 - 113,717,754
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039277, Cpxcr1
Downstream geneEG624153, LOC100039300, EG665045, LOC100039319, LOC624284
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089K17.bB6Ng01-089K17.g
ACCDH902190DH902191
length1,1471,206
definitionDH902190|Mus musculus domesticus DNA, BAC clone: B6Ng01-089K17, 5' end.DH902191|Mus musculus domesticus DNA, BAC clone: B6Ng01-089K17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttagtatctctataagtgcttatgctaaattcacaccaagcta
gtgtgcctcatttagtttcatgaaatattctggtcatgaacaataaatga
aaataaatgcaacatctgtaactataaagagtatatgaatataagagtga
catatgtcctcataaataagtgaataatcttcaaagagacactactatat
ttaaggccaagaaaacaattaaaaatgttaatttaatcttgattattaag
gaaattgagctgcttactatatttaactgaaggattacttggataatgga
tactatatactagaaaaaaataaagaaaaattccttatacaatttcaaga
aatagaagaacagtttactagagttttgatattttacatagaataattta
aaccctttattaaatttattttatatttatttagtaagttttcatattac
tagagattaccaagatagttactatgccaacctgtgtatataattcttag
tctatttgtcaaagccccttatacttgtaataaaggtcaatgatcttgat
aataatttatatataaatgtatgcatagctatgataatttcattacaatt
gcaaacatgtttttaaactttttatactctaaagtttgttaagtgatgaa
atttttaaggtaactaaacatgaaaacatgagataactaacattaaaata
aaaatagctattccaggatctttaagtattcttgttatttgtgaaataga
ctgaaatatagaaatggcatatatagatcatgcctgaagtagctggaaaa
gtgagtggcattcaacacaaaatcctaaacgtaaattcttcagtaaaagg
cacgtgtttggatgacagagtacaaataagtgtacacatacacataatta
ataaatattagatttcatattttgatttaatgactactctagaagaataa
aaatactttagttctgaaactttctaaccacttaatgtcaggatccaccc
aagtgaaaggatctgttgtctaaattttagtggttcctcctaacactaat
caaattttcacatgattagtgagtactagagtctgaatttgagaagaaaa
tgcttctttcaacaatttcattaaaaacacatgggtttagatctaga
gaattcctgtatggaggtgctgtaatgccatagcatgaagctcagaaaat
gaagcctggaatatgtaggaaatgtccagatgctggaaatgtcaaaacgt
agtaaaaaaatgccagaaaaggctacctacagggaatttaatcagtgcta
gagagagactagttaaagttaccaaaattgtaaggcaaaattgtaaggca
aaagcaagctaatccctctgaaatcagacaaacaggtgaggaatatagga
tttggaatttactttgcttgtttttagtcttcctttgatgtagtattatc
tcaatattcctccattactccattttggaatgataatgtgtatttaggtc
attgtatgcaatttgctttttgatttttgtagataattgctattacaaga
tatataaagagattttattcatttggtataaaaatggaaatattaaattt
gtaggtaaaggtgcaaaaccagaaacattatactgaatggcatagctgtt
ggttagagagagaaatgcaatatgtcatcacatgcatgaaattcagtttt
ggattctttgatatctgtgcttatcttggagtacctgtagaagctatgaa
attaaaaaaaaaacttattcttgcagagagaacattactaagggagtaga
atagtagagtgaaattgatatgaatgacgaaaggggagtaaaggcacata
cagttttaagtgatgatggtgatggtatgatagggcaaaagaagtgtcta
caggactactaaatgctagggctgtttgaaaaagacatataggaagctat
tgtttataaccttctttaaaagtacataggaaaaaagttaccctacatga
tggggataatattccttcaaaaaaaaaagcatatccataaatatgagcca
aattccaagcttagaaagtttctctctctttttttttaatagatatttct
ttatacattcaatggtatcccccttccaattctctcgaaaatctctatct
cccaacccgctccccagccaccaatctgctctggcttgctttcctatatg
ggactatgacttcaaagacaggctctctcatgatgacgcaaagcgcttcg
tcaattgctctatacgctgatctaggagcgtcttaggtcaagactccagg
actgcatgtcctggtcccatacttggccttgtcatgactagtagtaaaat
actctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_113716599_113717754
seq2: B6Ng01-089K17.b_47_1193

seq1  GAATTCTTTAGTATCTCTATAAGTGCTTCATGCTAAATTCACACCAAGCT  50
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAATTCTTTAGTATCTCTATAAGTGCTT-ATGCTAAATTCACACCAAGCT  49

seq1  AGTGTGCCTCATTTAGTTTCATGAAATATTCTGGTCATGAACAATAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGCCTCATTTAGTTTCATGAAATATTCTGGTCATGAACAATAAATG  99

seq1  AAAATAAATGCAACATCTGTAACTATAAAGAGTATATGAATATAAGAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATGCAACATCTGTAACTATAAAGAGTATATGAATATAAGAGTG  149

seq1  ACATATGTCCTCATAAATAAGTGAATAATCTTCAAAGAGACACTACTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGTCCTCATAAATAAGTGAATAATCTTCAAAGAGACACTACTATA  199

seq1  TTTAAGGCCAAGAAAACAATTAAAAATGTTAATTTAATCTTGATTATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGCCAAGAAAACAATTAAAAATGTTAATTTAATCTTGATTATTAA  249

seq1  GGAAATTGAGCTGCTTACTATATTTAACTGAAGGATTACTTGGATAATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTGAGCTGCTTACTATATTTAACTGAAGGATTACTTGGATAATGG  299

seq1  ATACTATATACTAGAAAAAAATAAAGAAAAATTCCTTATACAATTTCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTATATACTAGAAAAAAATAAAGAAAAATTCCTTATACAATTTCAAG  349

seq1  AAATAGAAGAACAGTTTACTAGAGTTTTGATATTTTACATAGAATAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAAGAACAGTTTACTAGAGTTTTGATATTTTACATAGAATAATTT  399

seq1  AAACCCTTTATTAAATTTATTTTATATTTATTTAGTAAGTTTTCATATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTTTATTAAATTTATTTTATATTTATTTAGTAAGTTTTCATATTA  449

seq1  CTAGAGATTACCAAGATAGTTACTATGCCAACCTGTGTATATAATTCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGATTACCAAGATAGTTACTATGCCAACCTGTGTATATAATTCTTA  499

seq1  GTCTATTTGTCAAAGCCCCTTATACTTGTAATAAAGGTCAATGATCTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTTGTCAAAGCCCCTTATACTTGTAATAAAGGTCAATGATCTTGA  549

seq1  TAATAATTTATATATAAATGTATGCATAGCTATGATAATTTCATTACAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTTATATATAAATGTATGCATAGCTATGATAATTTCATTACAAT  599

seq1  TGCAAACATGTTTTTAAACTTTTTATACTCTAAAGTTTGTTAAGTGATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACATGTTTTTAAACTTTTTATACTCTAAAGTTTGTTAAGTGATGA  649

seq1  AATTTTTAAGGTAACTAAACATGAAAACATGAGATAACTAACATTAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTAAGGTAACTAAACATGAAAACATGAGATAACTAACATTAAAAT  699

seq1  AAAAATAGCTATTCCAGGATCTTTAAGTATTCTTGTTATTTGTGAAATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAGCTATTCCAGGATCTTTAAGTATTCTTGTTATTTGTGAAATAG  749

seq1  ACTGAAATATAGAAATGGCATATATAGATCATGCCTGAAGTAGCTGGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAATATAGAAATGGCATATATAGATCATGCCTGAAGTAGCTGGAAA  799

seq1  AGTGAGTGGCATTCAACACAAAATCCTAAACGTAAATTCTTCAGTAAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTGGCATTCAACACAAAATCCTAAACGTAAATTCTTCAGTAAAAG  849

seq1  GCACGTGTTTGGATGACAGAGTACAAATAAGTGTACACATACACATAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGTGTTTGGATGACAGAGTACAAATAAGTGTACACATACACATAATT  899

seq1  AATAAATATTAGATTTCATATTTTGATTTAATGACTACTCTAGAAGAATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATATTAGATTTCATATTTTGATTTAATGACTACTCTAGAAGAATA  949

seq1  AAAATACTTTAGTTCTGATACTTTCAAAACCACTTAATGTCAGAATCCAC  1000
      |||||||||||||||||| ||||||  |||||||||||||||| ||||||
seq2  AAAATACTTTAGTTCTGAAACTTTC-TAACCACTTAATGTCAGGATCCAC  998

seq1  CCAAGTGAAAGGATCTGTTGTCTAAATTTTTAGTGGTTCCT-CTAACACT  1049
      |||||||||||||||||||||||||| |||||||||||||| ||||||||
seq2  CCAAGTGAAAGGATCTGTTGTCTAAA-TTTTAGTGGTTCCTCCTAACACT  1047

seq1  -ATCAAATTTTCAACATGATTAGTGAAGTACTAGAGTCTGATTTTGAAGA  1098
       ||||||||||| |||||||||||| ||||||||||||||| |||| |||
seq2  AATCAAATTTTC-ACATGATTAGTG-AGTACTAGAGTCTGAATTTG-AGA  1094

seq1  AGAAAATGCTTCTTTCAAAACAATTATCATTAAAAAACACAATGGTTTAA  1148
      ||||||||||||||||  ||||||| ||||| |||||||| |||| || |
seq2  AGAAAATGCTTCTTTC--AACAATT-TCATT-AAAAACAC-ATGGGTTTA  1139

seq1  GATCTAGA  1156
      ||||||||
seq2  GATCTAGA  1147