BAC Information

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BAC

Clone NameB6Ng01-092F20
ChromosomeX (Build37)
Map Location 151,094,867 - 151,226,051
singlet/doubletdoublet
Overlap geneLOC667331
Upstream geneKctd12b, 2210013O21Rik, Smt3h1-ps, Spin2, 4921511M17Rik, OTTMUSG00000019268, LOC625650, LOC100040020, EG546397, OTTMUSG00000019256, EG434874, LOC635580, EG625767, LOC270665, LOC100040076, 4930524N10Rik, EG434879, LOC667313, 4930542N07Rik, EG434881, LOC100040899
Downstream geneLOC100040925, LOC100040937, Magea6, Magea3, LOC626034, Magea8, Magea2, Magea5, Magea1, 1700042B14Rik, LOC245676, Amd-ps1, LOC667369, Sat1, Acot9, LOC667383, Prdx4, LOC667394, Ptchd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092F20.bB6Ng01-092F20.g
ACCDH904146DH904147
length1,106903
definitionDH904146|Mus musculus domesticus DNA, BAC clone: B6Ng01-092F20, 5' end.DH904147|Mus musculus domesticus DNA, BAC clone: B6Ng01-092F20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,224,946 - 151,226,051)(151,094,867 - 151,095,771)
sequence
gaattcccccaataaacaaaaaaactgtactatcatgtgtaactctggat
gcaaactgaatgccaggttttcctgactgtcatgcacataatcctaagat
aaggttacatcattcaatgacttttcactatttagagtccagaaacacca
gttaggttatgtaacctcaacattcccattctagtttcttattacagatc
acatatcaatgggatgataatttctttggacctaggcacacaagggccct
tcccatcctgtgagttctggctcaggacctaatacttatatgaatattat
ggtgagttttccaattagtgaatctgcatgttctgtctatattaagagcc
tatgctgaataaatccaaatccgacaaagggtttactttgctaccaagtc
tgatcttgcttcgcagcactatcttcaacaccatgaccttgttcatgtca
cacaaaatctgcactggattttctgtactgtattgtaaaatcatatttaa
aactgctctctgcagattcctattctttcctttatctagtcttctactgg
taaacttttctgccactgtctttgttcatgcccaggccttgctccaggca
tcgaagtgcttcactagattttcctggtgagttcccccatgaaaaaaatc
aacttaatgaacaaggcaactgtgtatgcacctagcccattctccttacc
ctccaggtcttcatccaccagtatattccattacttcccatgattacttc
ctgtcctgttgctccggtaactccagtccctggtagttcttcaagacaca
aaaaatgcatttgccatcttcatagtatgaagcatgtatctggatgctta
gattaaacattggccagggcttgtgacactcccctgaaattttttcctta
gcctttcaatcactcccacccttagtcacgatatgcaggattggcaatag
ttttctcagatgatatatactagagctaagtctccttgtgatacctgcca
cattctaagatcaagttttgagtgcacaattcacactttatgcttacctg
atgatgtttccctaacctcagcttctagtgctttcttcaaatggcccttc
actaga
gaattcatataaaaatttcactagtagagacactgaatatggggctatat
ataggaaagagaacaactgttccttcagggaagggacggatgagactttc
agaagctgctatggaataaaggcaacaagactatatggcaggatagtccc
agaagatgaatctagcttggattagacaattgcaagggactagtgttagc
tgtgtttaactctgtgtgtgtctactattaagcatggttgtttctcatct
gagcttggagaaataaagttctggactaatgaattccctgatgccttcag
agatgttgtatttgtaggtagaaacatgtgaatgtgcttgttctgtgttc
atgtctgggacaggatcttttatttctgtgctgtcagtctcattgttcaa
ggagggaagcctcaacttctttatgtccaaacaagggtggtgtctgaaag
actgagagaaaaaaaaaagtatatgacagaatcacaaaaatgcattcaga
gaagggattgtgcattcaatgtaatgtggtacacttctaattagagtcta
tatctcacctcaaatttttattattgatttatattcctagagaaacaaat
acatcagctaaagagcaaagtaaaaatgatcatttctacaccatagtaac
atgggtaagattatttcatgtaagcttgtacttaatgtggctatcgagtt
ctgcatatactctgcatccatatttaaacattcctttgtaatgaagagaa
agagaggaatgagaaatgaagaaattcagagtatgggagaaagttaaggg
aaagagtataaagagagaagagagagagagagatggagagaaaaacttgg
atattcttattatccacatttttacaaattcccatggttttttttttcaa
ata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_151224946_151226051
seq2: B6Ng01-092F20.b_46_1151 (reverse)

seq1  TCTAGTGAAGGG-CATTTGAAGATAGCACTAGAAGCTGAGGTTTAGGGAA  49
      |||||||||||| |||||||||| ||||||||||||||||| ||||||||
seq2  TCTAGTGAAGGGCCATTTGAAGAAAGCACTAGAAGCTGAGG-TTAGGGAA  49

seq1  ACATCATCAGGTAAGCATAAAGTGTGAATTGTGCACTCAAAACTTGATCT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATCAGGTAAGCATAAAGTGTGAATTGTGCACTCAAAACTTGATCT  99

seq1  TAGAATGT-GCAGGTATCACAAGGAGACTTAGCTCTAGTATATATCATCT  148
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGTGGCAGGTATCACAAGGAGACTTAGCTCTAGTATATATCATCT  149

seq1  GAGAAAACTATTGCCAATCCTGCATATCCTGACCTAAGGGTGGGAGTGAT  198
      |||||||||||||||||||||||||||| ||| |||||||||||||||||
seq2  GAGAAAACTATTGCCAATCCTGCATATCGTGA-CTAAGGGTGGGAGTGAT  198

seq1  TGAAAGGCTAAGGAAAAAATTTCAGGGGAGTGTCACAAGCCCTGGCCAAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGCTAAGGAAAAAATTTCAGGGGAGTGTCACAAGCCCTGGCCAAT  248

seq1  GTTTAATCTAAGCATCCAGATACATGCTTCATACTATGAAGATGGCAAAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATCTAAGCATCCAGATACATGCTTCATACTATGAAGATGGCAAAT  298

seq1  GCATTTTTTGTGTCTTGAAGAACTACCAGGGACTGGAGTTACCGGAGCAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTTTGTGTCTTGAAGAACTACCAGGGACTGGAGTTACCGGAGCAA  348

seq1  CAGGACAGGAAGTAATCATGGGAAGTAATGGAATATACTGGTGGATGAAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGGAAGTAATCATGGGAAGTAATGGAATATACTGGTGGATGAAG  398

seq1  ACCTGGAGGGTAAGGAGAATGGGCTAGGTGCATACACAGTTGCCTTGTTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGAGGGTAAGGAGAATGGGCTAGGTGCATACACAGTTGCCTTGTTC  448

seq1  ATTAAGTTGATTTTTTTCATGGGGGAACTCACCAGGAAAATCTAGTGAAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTTGATTTTTTTCATGGGGGAACTCACCAGGAAAATCTAGTGAAG  498

seq1  CACTTCGATGCCTGGAGCAAGGCCTGGGCATGAACAAAGACAGTGGCAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCGATGCCTGGAGCAAGGCCTGGGCATGAACAAAGACAGTGGCAGA  548

seq1  AAAGTTTACCAGTAGAAGACTAGATAAAGGAAAGAATAGGAATCTGCAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTACCAGTAGAAGACTAGATAAAGGAAAGAATAGGAATCTGCAGA  598

seq1  GAGCAGTTTTAAATATGATTTTACAATACAGTACAGAAAATCCAGTGCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTTTTAAATATGATTTTACAATACAGTACAGAAAATCCAGTGCAG  648

seq1  ATTTTGTGTGACATGAACAAGGTCATGGTGTTGAAGATAGTGCTGCGAAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTGTGACATGAACAAGGTCATGGTGTTGAAGATAGTGCTGCGAAG  698

seq1  CAAGATCAGACTTGGTAGCAAAGTAAACCCTTTGTCGGATTTGGATTTAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCAGACTTGGTAGCAAAGTAAACCCTTTGTCGGATTTGGATTTAT  748

seq1  TCAGCATAGGCTCTTAATATAGACAGAACATGCAGATTCACTAATTGGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATAGGCTCTTAATATAGACAGAACATGCAGATTCACTAATTGGAA  798

seq1  AACTCACCATAATATTCATATAAGTATTAGGTCCTGAGCCAGAACTCACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACCATAATATTCATATAAGTATTAGGTCCTGAGCCAGAACTCACA  848

seq1  GGATGGGAAGGGCCCTTGTGTGCCTAGGTCCAAAGAAATTATCATCCCAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGGAAGGGCCCTTGTGTGCCTAGGTCCAAAGAAATTATCATCCCAT  898

seq1  TGATATGTGATCTGTAATAAGAAACTAGAATGGGAATGTTGAGGTTACAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGTGATCTGTAATAAGAAACTAGAATGGGAATGTTGAGGTTACAT  948

seq1  AACCTAACTGGTGTTTCTGGACTCTAAATAGTGAAAAGTCATTGAATGAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAACTGGTGTTTCTGGACTCTAAATAGTGAAAAGTCATTGAATGAT  998

seq1  GTAACCTTATCTTAGGATTATGTGCATGACAGTCAGGAAAACCTGGCATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCTTATCTTAGGATTATGTGCATGACAGTCAGGAAAACCTGGCATT  1048

seq1  CAGTTTGCATCCAGAGTTACACATGATAGTACAGTTTTTTTGTTTATTGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGCATCCAGAGTTACACATGATAGTACAGTTTTTTTGTTTATTGG  1098

seq1  GGGAATTC  1106
      ||||||||
seq2  GGGAATTC  1106

seq1: chrX_151094867_151095771
seq2: B6Ng01-092F20.g_68_970

seq1  GAATTCATATAAAAATTTCACTAGTAGAGACACTGAATATGGGGCTATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATAAAAATTTCACTAGTAGAGACACTGAATATGGGGCTATAT  50

seq1  ATAGGAAAGAGAACAACTGTTCCTTCAGGGAAGGGACGGATGAGACTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAAGAGAACAACTGTTCCTTCAGGGAAGGGACGGATGAGACTTTC  100

seq1  AGAAGCTGCTATGGAATAAAGGCAACAAGACTATATGGCAGGATAGTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTGCTATGGAATAAAGGCAACAAGACTATATGGCAGGATAGTCCC  150

seq1  AGAAGATGAATCTAGCTTGGATTAGACAATTGCAAGGGACTAGTGTTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATGAATCTAGCTTGGATTAGACAATTGCAAGGGACTAGTGTTAGC  200

seq1  TGTGTTTAACTCTGTGTGTGTCTACTATTAAGCATGGTTGTTTCTCATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTAACTCTGTGTGTGTCTACTATTAAGCATGGTTGTTTCTCATCT  250

seq1  GAGCTTGGAGAAATAAAGTTCTGGACTAATGAATTCCCTGATGCCTTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGGAGAAATAAAGTTCTGGACTAATGAATTCCCTGATGCCTTCAG  300

seq1  AGATGTTGTATTTGTAGGTAGAAACATGTGAATGTGCTTGTTCTGTGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTGTATTTGTAGGTAGAAACATGTGAATGTGCTTGTTCTGTGTTC  350

seq1  ATGTCTGGGACAGGATCTTTTATTTCTGTGCTGTCAGTCTCATTGTTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGGGACAGGATCTTTTATTTCTGTGCTGTCAGTCTCATTGTTCAA  400

seq1  GGAGGGAAGCCTCAACTTCTTTATGTCCAAACAAGGGTGGTGTCTGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAAGCCTCAACTTCTTTATGTCCAAACAAGGGTGGTGTCTGAAAG  450

seq1  ACTGAGAGAAAAAAAAAAGTATATGACAGAATCACAAAAATGCATTCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGAGAAAAAAAAAAGTATATGACAGAATCACAAAAATGCATTCAGA  500

seq1  GAAGGGATTGTGCATTCAATGTAATGTGGTACACTTCTAATTAGAGTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGATTGTGCATTCAATGTAATGTGGTACACTTCTAATTAGAGTCTA  550

seq1  TATCTCACCTCAAATTTTTATTATTGATTTATATTCCTAGAGAAACAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCACCTCAAATTTTTATTATTGATTTATATTCCTAGAGAAACAAAT  600

seq1  ACATCAGCTAAAGAGCAAAGTAAAAATGATCATTTCTACACCATAGTAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGCTAAAGAGCAAAGTAAAAATGATCATTTCTACACCATAGTAAC  650

seq1  ATGGGTAAGATTATTTCATGTAAGCTTGTACTTAATGTGGCTATCGAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTAAGATTATTTCATGTAAGCTTGTACTTAATGTGGCTATCGAGTT  700

seq1  CTGCATATACTCTGCATCCATATTTAAACATTCCTTTGTAATGAAGAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATATACTCTGCATCCATATTTAAACATTCCTTTGTAATGAAGAGAA  750

seq1  AGAGAGGAATGAGAAATGAAGAAATTCAGAGTATGGGAGAAAGTTAAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGAATGAGAAATGAAGAAATTCAGAGTATGGGAGAAAGTTAAGGG  800

seq1  AAAGAGTATAAAGAGAGAAGAGAGAGAGAGAGATGGAGAGAAAAACATGC  850
      |||||||||||||||||||||||||||||||||||||||||||||| || 
seq2  AAAGAGTATAAAGAGAGAAGAGAGAGAGAGAGATGGAGAGAAAAACTTGG  850

seq1  ATATTCTTATTTATCCACATTTTTATAATTTCCCATGGTTTTTTTTTTTC  900
      ||||||||| ||||||||||||||| || ||||||||| |||||||||||
seq2  ATATTCTTA-TTATCCACATTTTTACAAATTCCCATGG-TTTTTTTTTTC  898

seq1  AAATA  905
      |||||
seq2  AAATA  903