BAC Information

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BAC

Clone NameB6Ng01-093B19
Chromosome13 (Build37)X (Build37)
Map Location 80,774,959 - 80,775,896164,148,175 - 164,148,855
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC666925, LOC382780, EG666933
Downstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093B19.bB6Ng01-093B19.g
ACCDH904688DH904689
length1,058613
definitionDH904688|Mus musculus domesticus DNA, BAC clone: B6Ng01-093B19, 5' end.DH904689|Mus musculus domesticus DNA, BAC clone: B6Ng01-093B19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(80,774,959 - 80,775,896)(164,148,175 - 164,148,855)
sequence
gaattctcacctaaggaataccaaatggttgagaagcacctgaaaaaatg
ttcagcatccttaatcatcaggaaaattcaaatcaaagcaaccctgagat
tccaccttacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctgatgaggatgtggagaaagaggaacactcctccattgatggtg
ggattgcaagattgtacaaccactctggaaatcagtctgtggttcctcag
aaaattggacatagtactacaggaggatccagcaatacttctcctgggca
tatatccagaagatgttccaactggtaagaaggacacatgcttcactatg
ttcatgggcattgatcatgactatgaaagtgaccagtatttccttcctac
attccctttccaaatgcaattttcgttttagtttcataagccaacataag
ccaaatgtgcccattcccaataattagattgtttttctaagtattccttg
ccttgtaatgcttaaaaggaagcaaaatagtcatgtcccacaatttagca
aggcacgtcccactctgccaaacatgcacttgattaaatgtatatgttac
acaaccttttctctaaaggtaatggggtttctgttcttggtttcttgact
gatttgtccacaccatgaatgggaggagcataaaaaataaagaaatatct
taacagcagatttcagccatgctaacaagtaggttaaccagtgagatcct
agcatatgctaatatagaaccatgcaaaacccgtgtgcagcaatgccatt
ccacagagaaccagaaaaaataaaaagagcaggctctagggtcaccagat
ccttgggacagtgttcatacaaggtcagaagtaagtttgtggtatttcta
gacagttcatatatataaactatcatttattcacgagtgagtaatcactt
ttaaagtctattaccttaattaataaatcctttgttggtggcaagataat
gataattgaagggcttatcatttctgcagggggaggggtgaattcagtgt
ctcaatgt
gaattccaggaattgctatggtgggagaatgggttctgatgatgccaagt
aatcttggtttctgttgcttatgttcttatgcttgactcctgctatctga
ttatctctagtgctacctgccctttgtggggaattgcaggctggtctcca
gttgagttgaggtctgaaccctgaggtcataattcacctacatggtaggt
gttccctcatgctcctggaactctggcccctccctaagttaccacccacc
acagcccccacaagagaagcatggtcaatagtcatgtaagcaagcttctg
accttcaggctaaactcctccccagttacctagcaacagtgaagaccata
aaaagggctgttcagcccccaccttcctctcttgctcttactcttgagtt
cttacttcttacccctcagtcttaccctctctctcccctctctttgtctt
cttccctttttctgtcttcttttctcctctctcctctcctctcctctctc
tctctctctctctctctctctctctcacacacacacactcacttacacac
atatatatagataagtagtgagatctggggtacgagattttgttttgttt
tatttttttttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_80774959_80775896
seq2: B6Ng01-093B19.b_45_982

seq1  GAATTCTCACCTAAGGAATACCAAATGGTTGAGAAGCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTAAGGAATACCAAATGGTTGAGAAGCACCTGAAAAAATG  50

seq1  TTCAGCATCCTTAATCATCAGGAAAATTCAAATCAAAGCAACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCATCCTTAATCATCAGGAAAATTCAAATCAAAGCAACCCTGAGAT  100

seq1  TCCACCTTACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTTACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150

seq1  AGATGCTGATGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGATGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGATGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGATGGTG  200

seq1  GGATTGCAAGATTGTACAACCACTCTGGAAATCAGTCTGTGGTTCCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCAAGATTGTACAACCACTCTGGAAATCAGTCTGTGGTTCCTCAG  250

seq1  AAAATTGGACATAGTACTACAGGAGGATCCAGCAATACTTCTCCTGGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGGACATAGTACTACAGGAGGATCCAGCAATACTTCTCCTGGGCA  300

seq1  TATATCCAGAAGATGTTCCAACTGGTAAGAAGGACACATGCTTCACTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCAGAAGATGTTCCAACTGGTAAGAAGGACACATGCTTCACTATG  350

seq1  TTCATGGGCATTGATCATGACTATGAAAGTGACCAGTATTTCCTTCCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGGCATTGATCATGACTATGAAAGTGACCAGTATTTCCTTCCTAC  400

seq1  ATTCCCTTTCCAAATGCAATTTTCGTTTTAGTTTCATAAGCCAACATAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTTTCCAAATGCAATTTTCGTTTTAGTTTCATAAGCCAACATAAG  450

seq1  CCAAATGTGCCCATTCCCAATAATTAGATTGTTTTTCTAAGTATTCCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATGTGCCCATTCCCAATAATTAGATTGTTTTTCTAAGTATTCCTTG  500

seq1  CCTTGTAATGCTTAAAAGGAAGCAAAATAGTCATGTCCCACAATTTAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTAATGCTTAAAAGGAAGCAAAATAGTCATGTCCCACAATTTAGCA  550

seq1  AGGCACGTCCCACTCTGCCAAACATGCACTTGATTAAATGTATATGTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACGTCCCACTCTGCCAAACATGCACTTGATTAAATGTATATGTTAC  600

seq1  ACAACCTTTTCTCTAAAGGTAATGGGGTTTCTGTTCTTGGTTTCTTGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCTTTTCTCTAAAGGTAATGGGGTTTCTGTTCTTGGTTTCTTGACT  650

seq1  GATTTGTCCACACCATGAATGGGAGGAGCATAAAAAATAAAGAAATATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTCCACACCATGAATGGGAGGAGCATAAAAAATAAAGAAATATCT  700

seq1  TAACAGCAGATTTCAGCCATGCTAACAAGTAGGTTAACCAGTGAGATCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGCAGATTTCAGCCATGCTAACAAGTAGGTTAACCAGTGAGATCCT  750

seq1  AGCATATGCTAATATAGAACCATGCAAAACCCGTGTGCAGCAATGCCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATGCTAATATAGAACCATGCAAAACCCGTGTGCAGCAATGCCATT  800

seq1  CCACAGAGAACCAGAAAAAATAAAAAGAGCAGGCTCTAGGGTCACCAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGAGAACCAGAAAAAATAAAAAGAGCAGGCTCTAGGGTCACCAGAT  850

seq1  CCTT-GGACAGTGTTCATACAAGGTCAGAAGTAAGTTTGTGGTATTTCTA  899
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGACAGTGTTCATACAAGGTCAGAAGTAAGTTTGTGGTATTTCTA  900

seq1  GACAGTTCATATATATTAACTATCATTTATTTCACGAGT  938
      |||||||||||||||| |||||||||||| |||||||||
seq2  GACAGTTCATATATATAAACTATCATTTA-TTCACGAGT  938

seq1: chrX_164148175_164148855
seq2: B6Ng01-093B19.g_556_679

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACAC  50
        |||| ||||||||||||||||||||||||||||||| |||||||||||
seq2  --TCTC-CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACAC  47

seq1  ACACACACACACACACACACACACACACACAGTG---TCTTAAACACAAA  97
      || |||  ||||||| | | | | | |   ||||   |||     || | 
seq2  ACTCACTTACACACATATATATAGATAAGTAGTGAGATCTGGGGTACGAG  97

seq1  AGATTAACAAGGATAATTTACAGTTAACAGAAGAAGTGCTTATGAAGTCA  147
      |  ||     |  | ||||    |||                        
seq2  ATTTTGTTTTGTTTTATTTTTTTTTAG-----------------------  124

seq1  GCAGAAGTGGAAAGTAAGGAGAATGAAATGAAATGAGGGCAAAGGCCAGG  197
                                                        
seq2  --------------------------------------------------  124

seq1  CAATGGATGAAGACACCTCCAGGGAGCTCTGTGGTGATCAACTGGGTCCT  247
                                                        
seq2  --------------------------------------------------  124

seq1  TCTTTTCTGATGAAGTTGCTTTATTGGGTTTTGTTTTGTTTTATTTTTCA  297
                                                        
seq2  --------------------------------------------------  124

seq1  GTTATTTTCAAATTTTGATCATGATAGTTCCTGAAACTGGCTGGGTGGAG  347
                                                        
seq2  --------------------------------------------------  124

seq1  TAGATACTGACAATCTACAGAATACTCATTTTCTTTTCTGACTACTAATT  397
                                                        
seq2  --------------------------------------------------  124

seq1  CTAGGACTTGGCTTCTGTGGACTTTCAGAATCTATGTTATAAAATAAGGA  447
                                                        
seq2  --------------------------------------------------  124

seq1  GAATTGTCCAAGTGCCACCTGTGAGTGATACCACTTGACAAAATGTACAC  497
                                                        
seq2  --------------------------------------------------  124

seq1  AGATGTACAAGATGACACTACCTGAAACCAAAAGACAGGGATTTGATTTA  547
                                                        
seq2  --------------------------------------------------  124

seq1  GAAATAAAATCAGATCGTTTTCTCCTAGAACTTCCAGTGGTAATTAAAAT  597
                                                        
seq2  --------------------------------------------------  124

seq1  TATTCCTGGTGTCACTATCTCTCCTGGAAAAATTAAGATTTATACTAATT  647
                                                        
seq2  --------------------------------------------------  124

seq1  ATGATTTCCATGATGCTATCAAAGGCACTTTTAG  681
                                        
seq2  ----------------------------------  124