BAC Information

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BAC

Clone NameB6Ng01-095H07
ChromosomeX (Build37)
Map Location 43,407,908 - 43,409,038
singlet/doubletsinglet
Overlap genenone
Upstream gene1110059M19Rik, LOC100040038, EG385346
Downstream geneLOC100040075, Actrt1, EG245405, LOC665632
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095H07.bB6Ng01-095H07.g
ACCDH906393DH906394
length1,1601,114
definitionDH906393|Mus musculus domesticus DNA, BAC clone: B6Ng01-095H07, 5' end.DH906394|Mus musculus domesticus DNA, BAC clone: B6Ng01-095H07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcatttttaatacctgagtagtacaccattgtgtaaatgtacc
acattttctgtatccattcctctgttgagggacatctgggttttttacag
cttctggctatgataaataaggctgctatgaacataggggtgcatgagtc
cttattatatcttttgggtatattaccaggagtggtatagctgagtactc
aggtagtactacaccaaattttctgaggaaccaccaaactgatttccaga
ttagttgtaccagctaataatcccaccagaaatgggggagtgttcctctt
tcccagttaacaatcccaccagaaatgggggagtgttcctctttcaacac
attcttatgagcatctgtttgtaaatcagtttttgatctcagtcattctg
cctggtgtgaggtggaatctcagggttgctttgatttgcatttccctgct
gacttaaggatgttgaacatttctttaggtgcttctcagtcatttggtat
tctgagttgagaattctttatttatctctgtatccaatttttataggatt
atttggttctctgaagtctaacttcttgagttctttgtatatattggatt
ttagctgtctactggatgtaggattggtaaagatcttttctcaatctgtt
ggttgccgttttgttctattgacagtgtcctttgccttacagaagcattg
aaattttatgaggtcccatttgtcaattattgatcttcaagcataagatg
ttgggaaacttaccctgtgcccatgtgttccagactcctccacactttct
tttttattagttttattgtatctggctttctgtgaaggtccttgatccat
ttggacttgagctttgtactaggagatgagaatggatcatttgcattctt
ctacatgctaactgccagttgaaccagcaccattgtgaaatgctgtcttt
tttctcactggatgctttagctctttgtcaaagatcaagtgaccataggg
gatcaattctgggtatcatctatcattgatcttgcccaatgtttatttgt
gtcttccaccgagtattgcaactcccatgctcatgtctgtggataaattg
cttcatctcccgagaacaaacatgcataactgtgggctggctggataatg
cactatacac
gaattcagctaaacacattagaattcaaagacaattcatcacaaaaaatt
atctggttcaaaatatcagagctgtctatgatgacaaaagtgaacatgct
tgccctgaagcaaaactgctgaatggcggtaacagtaaatcatgtccaca
aacatggataaatgaatattttgaaatattgttataataagtgtagtgaa
atactttaacggtttacatttttgtctttgataaaattttactcaggaat
atgtaacattcagagcagtaaagagtaattttccacatactaaattctac
ttgagcttagttatatgaaacaactgtctttttattattattattctttc
atttgtcagaaaaagtatttcctctggtatactcttcatattatagattc
ccaattatgctttcatattgctgacacaaccgtgcatcattatagaacat
cacacaactatgggcaaactatttgttcattaaatcctaattaagaaagt
ccaaaccttaaatgcatttccatatatacttatgaaatcataataataat
gggaagtttctaaaacatgcatttgtaaacgttatgtagtttgtttgttt
gtttttgctgtaatagacaatgtttctctctcataaattgaattagaatg
tttgttataaaactgaaaatggtcacttcaattctttttcaagattttat
ttgattttatttgattgttctagatcctataggcggatctgttgtaggag
ttctatgattttcactagtgtaccttaaaacatctgattctgcagacact
tctcaaatttaaaaaagtcaaactcaatcatggctttgaggtaaagctca
gtaacaatgttttcacagccagtgacagatatattcaattgttagtaggt
aatatattttggcagatttgtcagtaatgtggtttttttgctgtcaaatg
tgatttgtttgctcgaatgtatgtctctataggtttgaaaaaatagtcta
tatgagtatctctagagagagtttcatttctatgctagcttttactaata
tgaaaagtttgtcatgaataaaaatttgaagatctttcccttaactgtag
ctcctccaatttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_43407908_43409038
seq2: B6Ng01-095H07.g_69_1182 (reverse)

seq1  TTAAATGTGGAGGAAAGCTACAGTTTAAGTGAAAGATCTTTCAAATTTTT  50
      |||||| ||||||  |||||||| ||||| |||||||| |||||||||||
seq2  TTAAAT-TGGAGG--AGCTACAG-TTAAGGGAAAGATC-TTCAAATTTTT  45

seq1  ATTTCATGACAAACTTTTTCATTATTTAGTAAAATAGCTAGCAATAGAAA  100
      | |||||||||||| |||||||   ||||||||  ||||||| |||||||
seq2  A-TTCATGACAAAC-TTTTCAT--ATTAGTAAA--AGCTAGC-ATAGAAA  88

seq1  TGAAACTCTCTCTAGGAGATACTCATATTAGACTTATTTTTTCAAACCTA  150
      |||||||||||||| |||||||||||| ||||| ||||||||||||||||
seq2  TGAAACTCTCTCTA-GAGATACTCATA-TAGAC-TATTTTTTCAAACCTA  135

seq1  TAAGAGACATACATTTCGAGCAAAACAAATCACATTTGACAGCAAAAAAA  200
      | ||||||||||| ||||||| ||||||||||||||||||||||||||||
seq2  T-AGAGACATACA-TTCGAGC-AAACAAATCACATTTGACAGCAAAAAAA  182

seq1  CCACATTACTGACAAATCTGCCAAAATATATTACCTACTAAC-ATTGAAT  249
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CCACATTACTGACAAATCTGCCAAAATATATTACCTACTAACAATTGAAT  232

seq1  ATATCTGTCACTGGCTGTGAAAACATTGTTACTGAGCTTTACCTCAAAGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGTCACTGGCTGTGAAAACATTGTTACTGAGCTTTACCTCAAAGC  282

seq1  CATGATTGAGTTTGACTTTTTTAAATTTGAGAAGTGTCTGCAGAATCAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTGAGTTTGACTTTTTTAAATTTGAGAAGTGTCTGCAGAATCAGA  332

seq1  TGTTTTAAGGTACACTAGTGAAAATCATAGAACTCCTACAACAGATCCGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAAGGTACACTAGTGAAAATCATAGAACTCCTACAACAGATCCGC  382

seq1  CTATAGGATCTAGAACAATCAAATAAAATCAAATAAAATCTTGAAAAAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGGATCTAGAACAATCAAATAAAATCAAATAAAATCTTGAAAAAGA  432

seq1  ATTGAAGTGACCATTTTCAGTTTTATAACAAACATTCTAATTCAATTTAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGTGACCATTTTCAGTTTTATAACAAACATTCTAATTCAATTTAT  482

seq1  GAGAGAGAAACATTGTCTATTACAGCAAAAACAAACAAACAAACTACATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAAACATTGTCTATTACAGCAAAAACAAACAAACAAACTACATA  532

seq1  ACGTTTACAAATGCATGTTTTAGAAACTTCCCATTATTATTATGATTTCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTTACAAATGCATGTTTTAGAAACTTCCCATTATTATTATGATTTCA  582

seq1  TAAGTATATATGGAAATGCATTTAAGGTTTGGACTTTCTTAATTAGGATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATATATGGAAATGCATTTAAGGTTTGGACTTTCTTAATTAGGATT  632

seq1  TAATGAACAAATAGTTTGCCCATAGTTGTGTGATGTTCTATAATGATGCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAACAAATAGTTTGCCCATAGTTGTGTGATGTTCTATAATGATGCA  682

seq1  CGGTTGTGTCAGCAATATGAAAGCATAATTGGGAATCTATAATATGAAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTGTGTCAGCAATATGAAAGCATAATTGGGAATCTATAATATGAAGA  732

seq1  GTATACCAGAGGAAATACTTTTTCTGACAAATGAAAGAATAATAATAATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACCAGAGGAAATACTTTTTCTGACAAATGAAAGAATAATAATAATA  782

seq1  AAAAGACAGTTGTTTCATATAACTAAGCTCAAGTAGAATTTAGTATGTGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACAGTTGTTTCATATAACTAAGCTCAAGTAGAATTTAGTATGTGG  832

seq1  AAAATTACTCTTTACTGCTCTGAATGTTACATATTCCTGAGTAAAATTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTACTCTTTACTGCTCTGAATGTTACATATTCCTGAGTAAAATTTT  882

seq1  ATCAAAGACAAAAATGTAAACCGTTAAAGTATTTCACTACACTTATTATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGACAAAAATGTAAACCGTTAAAGTATTTCACTACACTTATTATA  932

seq1  ACAATATTTCAAAATATTCATTTATCCATGTTTGTGGACATGATTTACTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATTTCAAAATATTCATTTATCCATGTTTGTGGACATGATTTACTG  982

seq1  TTACCGCCATTCAGCAGTTTTGCTTCAGGGCAAGCATGTTCACTTTTGTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCGCCATTCAGCAGTTTTGCTTCAGGGCAAGCATGTTCACTTTTGTC  1032

seq1  ATCATAGACAGCTCTGATATTTTGAACCAGATAATTTTTTGTGATGAATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAGACAGCTCTGATATTTTGAACCAGATAATTTTTTGTGATGAATT  1082

seq1  GTCTTTGAATTCTAATGTGTTTAGCTGAATTC  1131
      ||||||||||||||||||||||||||||||||
seq2  GTCTTTGAATTCTAATGTGTTTAGCTGAATTC  1114