BAC Information

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BAC

Clone NameB6Ng01-095M06
ChromosomeX (Build37)
Map Location 13,572,497 - 13,573,653
singlet/doubletsinglet
Overlap genenone
Upstream geneUsp9x, LOC100043000, LOC100043002, LOC675380, Ddx3x, LOC385326, LOC634019, LOC668990, LOC100043947, LOC100043948, Nyx, LOC675416, Cask, Gpr34, Gpr82, LOC385327
Downstream geneEG385328, LOC668991
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095M06.bB6Ng01-095M06.g
ACCDH906616DH906617
length1,1451,156
definitionDH906616|Mus musculus domesticus DNA, BAC clone: B6Ng01-095M06, 5' end.DH906617|Mus musculus domesticus DNA, BAC clone: B6Ng01-095M06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgaactgactgtgtcaaaaaaaatcatattcctgttgaatgtta
cagagcttggcaacagcaggagacttggcctggcagccagaaaaagcaag
tcccttcattgacatgttacaattagcacccatggagacagcagcttatg
tacagtccactgtttgtaactactagttgggagttttggcatgaaggcat
ttcctatggtacagtgcttagcagctagaagtcagaaatttacttcttta
taatgcaaaatttaaggcttttcctgattaagtacaaagactcattaaag
caaaaagcaaaaagcaatacatttggaacaagagactacttacaggatac
aaaaatgaggtcagcagggcagtaaagaaatgaaaacaattatataaaga
cttctgacttattacttaaggtttctgatgctaagaggtcagccatgaaa
gcatacataaaagtaatattatatgacctgaccaggttatatttaggaat
atataggtatgtacatatatgcatgtaataaaagtgatgaaaaaagagac
catgaatttgaaggagagcaaggtttggagaggataaagtgaagggatga
atattataattaagttataatctcaaaaataacaaaaataaaaagctaga
ctagttactaacacttagttcccttcatgtgtactatgtttccttcagat
ttctgattctaacattctgttttggtgtgtattattgaacacacctaacc
agactcccctgtctatgttgctcaatctttgctgtattcaccacttactt
tccctggacttagttctctatgctctttgagtaccttcctctgaagatgt
ggatttgatatctgctatttgtcttttcagcattcattatacagatccgg
aatccaatctgagtttgcaagctcactgtgcccactgtcatattcttaat
agataagatgccatagagctttgattaaatcttggtagattaagtgcatg
tttaaaatgaatatacaaaatgtataatatttcaagagatgagaacagga
ctaacatccctcttctgtaactcatattagtatggagaaaattttttgac
gacatctcccaatctattcttcaactggcctttcttctatccagc
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
tggagagctagagaagtagccaggagctaaagggatctgcaaccctatag
tgaacaaatttatgagctaccagtacccagagcttcttgactctagctgc
atatatatcaaagatgctagtcggcatcactgtaagagagcccaattgac
tgcactttattgccaagtaatggcatccaggccaaaataggtgaatggtg
tgctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_13572497_13573653
seq2: B6Ng01-095M06.b_50_1194

seq1  GAATTCTGAACTGACTGTGTCAAAAAAAATCATATTCCTGTTGAATGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAACTGACTGTGTCAAAAAAAATCATATTCCTGTTGAATGTTA  50

seq1  CAGAGCTTGGCAACAGCAGGAGACTTGGCCTGGCAGCCAGAAAAAGCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTTGGCAACAGCAGGAGACTTGGCCTGGCAGCCAGAAAAAGCAAG  100

seq1  TCCCTTCATTGACATGTTACAATTAGCACCCATGGAGACAGCAGCTTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCATTGACATGTTACAATTAGCACCCATGGAGACAGCAGCTTATG  150

seq1  TACAGTCCACTGTTTGTAACTACTAGTTGGGAGTTTTGGCATGAAGGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTCCACTGTTTGTAACTACTAGTTGGGAGTTTTGGCATGAAGGCAT  200

seq1  TTCCTATGGTACAGTGCTTAGCAGCTAGAAGTCAGAAATTTACTTCTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATGGTACAGTGCTTAGCAGCTAGAAGTCAGAAATTTACTTCTTTA  250

seq1  TAATGCAAAATTTAAGGCTTTTCCTGATTAAGTACAAAGACTCATTAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCAAAATTTAAGGCTTTTCCTGATTAAGTACAAAGACTCATTAAAG  300

seq1  CAAAAAGCAAAAAGCAATACATTTGGAACAAGAGACTACTTACAGGATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGCAAAAAGCAATACATTTGGAACAAGAGACTACTTACAGGATAC  350

seq1  AAAAATGAGGTCAGCAGGGCAGTAAAGAAATGAAAACAATTATATAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGAGGTCAGCAGGGCAGTAAAGAAATGAAAACAATTATATAAAGA  400

seq1  CTTCTGACTTATTACTTAAGGTTTCTGATGCTAAGAGGTCAGCCATGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGACTTATTACTTAAGGTTTCTGATGCTAAGAGGTCAGCCATGAAA  450

seq1  GCATACATAAAAGTAATATTATATGACCTGACCAGGTTATATTTAGGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACATAAAAGTAATATTATATGACCTGACCAGGTTATATTTAGGAAT  500

seq1  ATATAGGTATGTACATATATGCATGTAATAAAAGTGATGAAAAAAGAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGGTATGTACATATATGCATGTAATAAAAGTGATGAAAAAAGAGAC  550

seq1  CATGAATTTGAAGGAGAGCAAGGTTTGGAGAGGATAAAGTGAAGGGATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATTTGAAGGAGAGCAAGGTTTGGAGAGGATAAAGTGAAGGGATGA  600

seq1  ATATTATAATTAAGTTATAATCTCAAAAATAACAAAAATAAAAAGCTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATAATTAAGTTATAATCTCAAAAATAACAAAAATAAAAAGCTAGA  650

seq1  CTAGTTACTAACACTTAGTTCCCTTCATGTGTACTATGTTTCCTTCAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTACTAACACTTAGTTCCCTTCATGTGTACTATGTTTCCTTCAGAT  700

seq1  TTCTGATTCTAACATTCTGTTTTGGTGTGTATTATTGAACACACCTAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATTCTAACATTCTGTTTTGGTGTGTATTATTGAACACACCTAACC  750

seq1  AGACTCCCCTGTCTATGTTGCTCAATCTTTGCTGTATTCACCACTTACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCCCCTGTCTATGTTGCTCAATCTTTGCTGTATTCACCACTTACTT  800

seq1  TCCCTGGACTTAGTTCTCTATGCTCTTTGAGTACCTTCCTCTGAAGATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGACTTAGTTCTCTATGCTCTTTGAGTACCTTCCTCTGAAGATGT  850

seq1  GGATTTGATATCTGCTATTTGTCTTTTCAGCATTCATTATACAGATCCGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGATATCTGCTATTTGTCTTTTCAGCATTCATTATACAGATCCGG  900

seq1  AATCCAATCTGAGTTTGCAAGCTCACTGTGCCCACTGTCATATTCTTAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAATCTGAGTTTGCAAGCTCACTGTGCCCACTGTCATATTCTTAAT  950

seq1  AGATAAGATGCCATAGAGCTTTGATTAAATCTTGGTAAGATTAAGGTGCA  1000
      |||||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  AGATAAGATGCCATAGAGCTTTGATTAAATCTTGGT-AGATTAA-GTGCA  998

seq1  TGTTTAAAATGAATATACAAAATGGTAT-ATATTTCAAGAGATGAGGAAC  1049
      ||||||||||||||||||||||| |||| |||||||||||||||||  | 
seq2  TGTTTAAAATGAATATACAAAAT-GTATAATATTTCAAGAGATGAG--AA  1045

seq1  CAGAACTAACATCCCTCTTCTGTAAACTCAATTATTAAGTAGTGGAGAAA  1099
      ||| ||||||||||||||||||| ||||||  |||| |||| ||||||||
seq2  CAGGACTAACATCCCTCTTCTGT-AACTCA--TATT-AGTA-TGGAGAAA  1090

seq1  ATGTTTTGACGACATCCTTCCCCATCTATTCTTTCAACTGCCCTTTCTTC  1149
      || |||||||||||||  |||| |||||||| |||||||| |||||||||
seq2  ATTTTTTGACGACATC--TCCCAATCTATTC-TTCAACTGGCCTTTCTTC  1137

seq1  TATCCAGC  1157
      ||||||||
seq2  TATCCAGC  1145