BAC Information

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BAC

Clone NameB6Ng01-097C02
ChromosomeX (Build37)
Map Location 16,284,214 - 16,410,660
singlet/doubletdoublet
Overlap geneMaob
Upstream geneLOC100043949, LOC100043950, Cypt6, LOC100038939, LOC668993, Maoa
Downstream geneNdph, LOC100043063, Efhc2, Fundc1, EG278181, EG668994
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097C02.bB6Ng01-097C02.g
ACCDH907583DH907584
length977803
definitionDH907583|Mus musculus domesticus DNA, BAC clone: B6Ng01-097C02, 5' end.DH907584|Mus musculus domesticus DNA, BAC clone: B6Ng01-097C02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,284,214 - 16,285,187)(16,409,859 - 16,410,660)
sequence
gaattctgcatagctgttcaaggatccccagtatctcaaagtagcagcca
tttgaaaatcatagccttggaactgtcctctacatttttgggggtgttct
actcttgctccccagaatacttccagggtcaactatctgcataacagtcc
ttgtcagagagttggtggtgccatgagcagcaaaggaaggcaaccattcc
ttcaagatacttttctttagtcatggagcttctgtgatcaaggaaatatg
tcttcctctttctgttggttaatgaatgcttaatacaacaaactgtttct
ctctattccagatcatttttgatatcttctttctatgtcagtatagttga
gcacctgacagaggatggaagcagtggttctctctacctttctatatatt
caaaacaatattctcagcttttggctacatcttcccaaagaagggttggg
gaaatgtccactccctaccaccctgctatgggaaactccccatgagctca
ggcagttggcttatctaaatccccacccaatcactctaatgcacaccccc
agttgaaaagcacaacataatgcatcaatgtatccaagaaagcagctatt
agtgctacctcatctaaaatacaattaaaaagacaactgatactctcaaa
atgaggatgaaggaaaatgccatttggctctctgaaagtgggcagaaaca
tttttagagactgtatgagtatagcaggattgctaacacagaaccaaagt
gaaaacaatgccaatctattcctttattgatttaaggcctttaatgatcc
agacactataggagttgcagaggcacccatgactccacctgcatatgtag
cagaggattagatagccttgttggacatcaatgtggagaagaggcccttg
gttcctggataggctagatgccccagtgtagggaaatgcaaggactagga
agcagagtgggtgggttggtgagcagg
gaattcactctgtatttcaggaaggccttccacttgctccctctcacctc
agatgcccaagaagttggaacacagtcgtgtgctatacatggctatacat
tacaaagcaagattatgtaaggtttcacatatgatagaatattaacctct
gggggtatgcaattgggtggtattttgtacatcacactgaagggaaaaac
ccatatccattgagagatgaaactcccattctttccaccttctggacgtc
tgtaaaacccctctttgatttctgttttcatggattcacctatttttaga
tattataatttttatagtagccgtgtgcttttgtatctttttatatctga
ttattttcacataatataatgtgatgtttctcatatttttttccagattt
tgatttcaagggcaatattgtattaggagaactttcaagacttattttgg
caggatgtggtgtccctgaaagtggaaatctgtatctgatgaccacttaa
caccatcttgagtaaaaaattatattttactgaaaatctcttttgactga
tactcatcatttagacttctgaaaatttcaactttcatttggagcttaaa
ttttttaatgtaagcattaattgcacagtttcatctaatatttgttcagt
gattcctataaagcagaacattcagaatattttggttgaaattataactc
agtgttagaacgctttgcctagaatacagggggccctcagttcaatctgt
agcacggcaaaaaacattctctctctctctctctctctctctctctctct
ctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_16284214_16285187
seq2: B6Ng01-097C02.b_34_1010

seq1  GAATTCTGCATAGCTGTTCAAGGATCCCCAGTATCTCAAAGTAGCAGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCATAGCTGTTCAAGGATCCCCAGTATCTCAAAGTAGCAGCCA  50

seq1  TTTGAAAATCATAGCCTTGGAACTGTCCTCTACATTTTTGGGGGTGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAATCATAGCCTTGGAACTGTCCTCTACATTTTTGGGGGTGTTCT  100

seq1  ACTCTTGCTCCCCAGAATACTTCCAGGGTCAACTATCTGCATAACAGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGCTCCCCAGAATACTTCCAGGGTCAACTATCTGCATAACAGTCC  150

seq1  TTGTCAGAGAGTTGGTGGTGCCATGAGCAGCAAAGGAAGGCAACCATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGAGAGTTGGTGGTGCCATGAGCAGCAAAGGAAGGCAACCATTCC  200

seq1  TTCAAGATACTTTTCTTTAGTCATGGAGCTTCTGTGATCAAGGAAATATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGATACTTTTCTTTAGTCATGGAGCTTCTGTGATCAAGGAAATATG  250

seq1  TCTTCCTCTTTCTGTTGGTTAATGAATGCTTAATACAACAAACTGTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCTTTCTGTTGGTTAATGAATGCTTAATACAACAAACTGTTTCT  300

seq1  CTCTATTCCAGATCATTTTTGATATCTTCTTTCTATGTCAGTATAGTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTCCAGATCATTTTTGATATCTTCTTTCTATGTCAGTATAGTTGA  350

seq1  GCACCTGACAGAGGATGGAAGCAGTGGTTCTCTCTACCTTTCTATATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTGACAGAGGATGGAAGCAGTGGTTCTCTCTACCTTTCTATATATT  400

seq1  CAAAACAATATTCTCAGCTTTTGGCTACATCTTCCCAAAGAAGGGTTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAATATTCTCAGCTTTTGGCTACATCTTCCCAAAGAAGGGTTGGG  450

seq1  GAAATGTCCACTCCCTACCACCCTGCTATGGGAAACTCCCCATGAGCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTCCACTCCCTACCACCCTGCTATGGGAAACTCCCCATGAGCTCA  500

seq1  GGCAGTTGGCTTATCTAAATCCCCACCCAATCACTCTAATGCACACCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTTGGCTTATCTAAATCCCCACCCAATCACTCTAATGCACACCCCC  550

seq1  AGTTGAAAAGCACAACATAATGCATCAATGTATCCAAGAAAGCAGCTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAAAAGCACAACATAATGCATCAATGTATCCAAGAAAGCAGCTATT  600

seq1  AGTGCTACCTCATCTAAAATACAATTAAAAAGACAACTGATACTCTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTACCTCATCTAAAATACAATTAAAAAGACAACTGATACTCTCAAA  650

seq1  ATGAGGATGAAGGAAAATGCCATTTGGCTCTCTGAAAGTGGGCAGAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGATGAAGGAAAATGCCATTTGGCTCTCTGAAAGTGGGCAGAAACA  700

seq1  -TTTTAGAGACTGTATGAGTATAGCAGGATTGCTAACACAGAACCAAAGT  749
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGAGACTGTATGAGTATAGCAGGATTGCTAACACAGAACCAAAGT  750

seq1  GAAAACAATGCCAATCTATTCCTTTATTGATTTAAGGCCTTTAATGATCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAATGCCAATCTATTCCTTTATTGATTTAAGGCCTTTAATGATCC  800

seq1  AGACACTATAGGAGTTGCAGAGGCACCCATGACTCCACCTGCATATGTAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTATAGGAGTTGCAGAGGCACCCATGACTCCACCTGCATATGTAG  850

seq1  CAGAGGA-TAGATAGCCTTGTTGGACATCAATG-GGAGAAGAGGCCCTTG  897
      ||||||| ||||||||||||||||||||||||| ||||||||||||||||
seq2  CAGAGGATTAGATAGCCTTGTTGGACATCAATGTGGAGAAGAGGCCCTTG  900

seq1  G-TCCTGGAAAGGCTAGATGCCCCAGTGTAGGGAAATGCAAGGACAGGGA  946
      | ||||||| |||||||||||||||||||||||||||||||||||  |||
seq2  GTTCCTGGATAGGCTAGATGCCCCAGTGTAGGGAAATGCAAGGACTAGGA  950

seq1  AGCAGGAGTGGGTGGGTTGGTGAGCAGG  974
      |||| |||||||||||||||||||||||
seq2  AGCA-GAGTGGGTGGGTTGGTGAGCAGG  977

seq1: chrX_16409859_16410660
seq2: B6Ng01-097C02.g_66_868 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGTTTTTTGCCGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGTTTTTTGCCGT  50

seq1  GCTACAGATTGAACTGAGGGCCCCCTGTATTCTAGGC-AAGCGTTCTAAC  99
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GCTACAGATTGAACTGAGGGCCCCCTGTATTCTAGGCAAAGCGTTCTAAC  100

seq1  ACTGAGTTATAATTTCAACCAAAATATTCTGAATGTTCTGCTTTATAGGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGTTATAATTTCAACCAAAATATTCTGAATGTTCTGCTTTATAGGA  150

seq1  ATCACTGAACAAATATTAGATGAAACTGTGCAATTAATGCTTACATTAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGAACAAATATTAGATGAAACTGTGCAATTAATGCTTACATTAAA  200

seq1  AAATTTAAGCTCCAAATGAAAGTTGAAATTTTCAGAAGTCTAAATGATGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAAGCTCCAAATGAAAGTTGAAATTTTCAGAAGTCTAAATGATGA  250

seq1  GTATCAGTCAAAAGAGATTTTCAGTAAAATATAATTTTTTACTCAAGATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAGTCAAAAGAGATTTTCAGTAAAATATAATTTTTTACTCAAGATG  300

seq1  GTGTTAAGTGGTCATCAGATACAGATTTCCACTTTCAGGGACACCACATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAAGTGGTCATCAGATACAGATTTCCACTTTCAGGGACACCACATC  350

seq1  CTGCCAAAATAAGTCTTGAAAGTTCTCCTAATACAATATTGCCCTTGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAAAATAAGTCTTGAAAGTTCTCCTAATACAATATTGCCCTTGAAA  400

seq1  TCAAAATCTGGAAAAAAATATGAGAAACATCACATTATATTATGTGAAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATCTGGAAAAAAATATGAGAAACATCACATTATATTATGTGAAAA  450

seq1  TAATCAGATATAAAAAGATACAAAAGCACACGGCTACTATAAAAATTATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGATATAAAAAGATACAAAAGCACACGGCTACTATAAAAATTATA  500

seq1  ATATCTAAAAATAGGTGAATCCATGAAAACAGAAATCAAAGAGGGGTTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTAAAAATAGGTGAATCCATGAAAACAGAAATCAAAGAGGGGTTTT  550

seq1  ACAGACGTCCAGAAGGTGGAAAGAATGGGAGTTTCATCTCTCAATGGATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACGTCCAGAAGGTGGAAAGAATGGGAGTTTCATCTCTCAATGGATA  600

seq1  TGGGTTTTTCCCTTCAGTGTGATGTACAAAATACCACCCAATTGCATACC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTTTCCCTTCAGTGTGATGTACAAAATACCACCCAATTGCATACC  650

seq1  CCCAGAGGTTAATATTCTATCATATGTGAAACCTTACATAATCTTGCTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGGTTAATATTCTATCATATGTGAAACCTTACATAATCTTGCTTT  700

seq1  GTAATGTATAGCCATGTATAGCACACGACTGTGTTCCAACTTCTTGGGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGTATAGCCATGTATAGCACACGACTGTGTTCCAACTTCTTGGGCA  750

seq1  TCTGAGGTGAGAGGGAGCAAGTGGAAGGCCTTCCTGAAATACAGAGTGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGTGAGAGGGAGCAAGTGGAAGGCCTTCCTGAAATACAGAGTGAA  800

seq1  TTC  802
      |||
seq2  TTC  803