BAC Information

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BAC

Clone NameB6Ng01-098N14
ChromosomeX (Build37)8 (Build37)
Map Location 159,109,936 - 159,110,45178,071,731 - 78,072,289
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneRai2, Gm47, Nhs, Reps2, LOC654358, LOC100041557
Downstream geneLOC667630, Rbbp7, 4932441K18Rik, LOC671250, Syap1, LOC100041607, Ctps2, S100g, LOC100040610, EG637051, Grpr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098N14.bB6Ng01-098N14.g
ACCDH908813DH908814
length890719
definitionDH908813|Mus musculus domesticus DNA, BAC clone: B6Ng01-098N14, 5' end.DH908814|Mus musculus domesticus DNA, BAC clone: B6Ng01-098N14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(159,109,936 - 159,110,451)(78,071,731 - 78,072,289)
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcattcctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtagctggtatctgtccagaaatttgtccatttcatccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttcttattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggttttatct
atcttgttgattttctcaagaaccaactcctcgtttggtaattctttgaa
tagttctcttgtttccacttggttgatttcacccctgagtttgattattt
cctgccgtctactcctcttgggtgatttgcttcctttttt
gaattctctgtttagctctgtaccccatctctttgttttgtttaattatt
tttatattgttctctttgtttttatttgattgactttagccccaagtttg
attatttcctaccatctactcctcctgggtgtgcttggttctttttgttc
tagagctttcaggtatacttttaattacgtagcatgggaactctccagtt
tctttatgagggcatttagttctatgaacttttcttttagcactcttttt
attgtgtcccattagttcaggtatgttgtgccctcattttcatgaaattc
tataaagtttctgctttagtttataaatatagtgaatacagttgcttgag
ttttgattatttattcatcattggatctctggagaaagtctgctcggtaa
tgtcatatagtctgaaaacacttgctaggttctatttgtgatcatgttaa
cagtttctatgtctattcttttgagctccgttgcttttttggtgctgttg
tttgttattacagttgacagtgttttctggttggtaaaatgaacttgtat
tgtcttttctcttgtattctggaacagattgacacacttgggctaactct
tctttaaatatttgtaagcatttttcaatgaaaccaaccagtctggtgat
tccttttgcttgacagttgtattgtttggataacagaatgaatggggaag
atggatggaggaggggatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_159109936_159110451
seq2: B6Ng01-098N14.b_422_934 (reverse)

seq1  AAAAAAGGAAGCAAATTCACCCAAGAGGAGTAGACGGCAGGAAATAATCA  50
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAAAAAGGAAGCAAA-TCACCCAAGAGGAGTAGACGGCAGGAAATAATCA  49

seq1  AACTCAGGGGTGAAATCAACCAAGTGGAAACAAGAAGAACTATTCAAAGA  100
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AACTCAGGGGTGAAATCAACCAAGTGGAAACAAG-AGAACTATTCAAAGA  98

seq1  ATTAACCAAACGAGGAGTTGGTTCTTTGAGAAAATCAACAAGATAGAT-A  149
      ||| |||||||||||||||||||| ||||||||||||||||||||||| |
seq2  ATT-ACCAAACGAGGAGTTGGTTC-TTGAGAAAATCAACAAGATAGATAA  146

seq1  AACCCTTAGCTAGACTCACTAAAGGGCACAGGGACAAAATCCTAATTAAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTAGCTAGACTCACTAAAGGGCACAGGGACAAAATCCTAATTAAC  196

seq1  AAAATCAGAAATGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCCA  249
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAGAAATGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCCA  246

seq1  AAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAACTGGAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAACTGGAAA  296

seq1  ACCTGGACGAAATGGACAAATTTCTGGACAGATACCAGGTACCAAAGTTG  349
      ||||||| |||||||||||||||||||||||||||||| |||||||||||
seq2  ACCTGGATGAAATGGACAAATTTCTGGACAGATACCAGCTACCAAAGTTG  346

seq1  AATCAGGATCAAGTTGACCATCTAAACAGTCCCATATCACCTAAAGAAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGATCAAGTTGACCATCTAAACAGTCCCATATCACCTAAAGAAAT  396

seq1  AGAAGCAGTTATTAATAGTCTCCCAACCAAAAAAAGCCCAGGACCAGATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAGTTATTAATAGTCTCCCAACCAAAAAAAGCCCAGGACCAGATG  446

seq1  GGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAATTCCAATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAATTCCAATT  496

seq1  CTGCACAAACTATTTCA  516
      |||||||||||||||||
seq2  CTGCACAAACTATTTCA  513

seq1: chr8_78071731_78072289
seq2: B6Ng01-098N14.g_228_786

seq1  AGGTATACTTTTAATTACGTAGCATGGGAACTCTCCAGTTTCTTTATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATACTTTTAATTACGTAGCATGGGAACTCTCCAGTTTCTTTATGAG  50

seq1  GGCATTTAGTTCTATGAACTTTTCTTTTAGCACTCTTTTTATTGTGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTAGTTCTATGAACTTTTCTTTTAGCACTCTTTTTATTGTGTCCC  100

seq1  ATTAGTTCAGGTATGTTGTGCCCTCATTTTCATGAAATTCTATAAAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTTCAGGTATGTTGTGCCCTCATTTTCATGAAATTCTATAAAGTTT  150

seq1  CTGCTTTAGTTTATAAATATAGTGAATACAGTTGCTTGAGTTTTGATTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTAGTTTATAAATATAGTGAATACAGTTGCTTGAGTTTTGATTAT  200

seq1  TTATTCATCATTGGATCTCTGGAGAAAGTCTGCTCGGTAATGTCATATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCATCATTGGATCTCTGGAGAAAGTCTGCTCGGTAATGTCATATAG  250

seq1  TCTGAAAACACTTGCTAGGTTCTATTTGTGATCATGTTAACAGTTTCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAACACTTGCTAGGTTCTATTTGTGATCATGTTAACAGTTTCTAT  300

seq1  GTCTATTCTTTTGAGCTCCGTTGCTTTTTTGGTGCTGTTGTTTGTTATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTCTTTTGAGCTCCGTTGCTTTTTTGGTGCTGTTGTTTGTTATTA  350

seq1  CAGTTGACAGTGTTTTCTGGTTGGTAAAATGAACTTGTATTGTCTTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGACAGTGTTTTCTGGTTGGTAAAATGAACTTGTATTGTCTTTTCT  400

seq1  CTTGTATTCTGGAACAGATTGACACACTTGGGCTAACTCTTCTTTAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATTCTGGAACAGATTGACACACTTGGGCTAACTCTTCTTTAAATA  450

seq1  TTTGTAAGCATTTTTCAATGAAACCAACCAGTCTGGTGATTCCTTTTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAGCATTTTTCAATGAAACCAACCAGTCTGGTGATTCCTTTTGCT  500

seq1  TGACAGTTGTATTGTTTGGATAACAGAATGAATGGGGAAGATGGATGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGTTGTATTGTTTGGATAACAGAATGAATGGGGAAGATGGATGGAG  550

seq1  GAGGGGATC  559
      |||||||||
seq2  GAGGGGATC  559