MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-099I23
Chromosome	X (Build37)
Map Location	24,480,050 - 24,481,181
singlet/doublet	singlet
Overlap gene	LOC100040417
Upstream gene	EG236749, EG245376, LOC546271, LOC100043957, LOC100043206, LOC669000, LOC629204, EG546272, LOC100043216, EG546282
Downstream gene	LOC100040428, LOC100040433, Xmr, LOC100038968, LOC100038977, LOC100038997, LOC664810, EG382275
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG236749 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:236749 MGI:3648288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG245376 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245376 MGI:3648554
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC546271 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546271
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 44 ESTs

name	LOC100043957 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	LOC100043206 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043206
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	LOC669000 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669000
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC629204 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629204
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 5 Proteins pseudo : _no_value

name	EG546272 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546272 MGI:3643862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 11 ESTs, 5 Proteins

name	LOC100043216 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043216
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 7 ESTs, 5 Proteins

name	EG546282 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546282 MGI:3646322
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040417 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040417
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 5 Proteins pseudo : _no_value

name	LOC100040428 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040428
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 66 ESTs

name	LOC100040433 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040433
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 2 Proteins pseudo : _no_value

name	Xmr (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382277
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100038968 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038968
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins pseudo : _no_value

name	LOC100038977 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038977
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 3 ESTs, 5 Proteins

name	LOC100038997 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038997
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 5 Proteins

name	LOC664810 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664810
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins pseudo : _no_value

name	EG382275 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382275 MGI:3703318
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG236749 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362382 GeneID:236749 MGI:3648288
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG236749 transcript_id : NM_001034864.2

name	EG245376 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126157496 GeneID:245376 MGI:3648554
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG245376 transcript_id : NM_001081666.1

name	LOC546271 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271011 GeneID:546271
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 44 ESTs product : similar to LOC635138 protein transcript_id : XM_001478408.1

name	LOC100043957 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271064 GeneID:100043957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : similar to XMR transcript_id : XM_001481261.1

name	LOC100043206 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271013 GeneID:100043206
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100043206 transcript_id : XM_001478415.1

name	EG546272 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406980 GeneID:546272 MGI:3643862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 5 Proteins product : predicted gene, EG546272, transcript variant 2 transcript_id : XM_620960.3

name	EG546272 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271016 GeneID:546272 MGI:3643862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 5 Proteins product : predicted gene, EG546272, transcript variant 1 transcript_id : XM_001478430.1

name	LOC100043216 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271020 GeneID:100043216
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 6 ESTs, 5 Proteins product : hypothetical protein LOC100043216, transcript variant 2 transcript_id : XM_001478456.1

name	LOC100043216 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271018 GeneID:100043216
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 5 Proteins product : hypothetical protein LOC100043216, transcript variant 1 transcript_id : XM_001478447.1

name	EG546282 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126090645 GeneID:546282 MGI:3646322
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG546282 transcript_id : NM_001081657.1

name	LOC100040428 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271221 GeneID:100040428
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 66 ESTs product : hypothetical protein LOC100040428 transcript_id : XM_001474898.1

name	Xmr (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:100816606 GeneID:382277
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Xmr protein transcript_id : NM_001040669.1

name	LOC100038977 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271231 GeneID:100038977
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 3 ESTs, 5 Proteins product : hypothetical protein LOC100038977, transcript variant 2 transcript_id : XM_001472083.1

name	LOC100038977 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271229 GeneID:100038977
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 5 Proteins product : hypothetical protein LOC100038977, transcript variant 1 transcript_id : XM_001472060.1

name	LOC100038997 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271233 GeneID:100038997
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 5 Proteins product : similar to XMR transcript_id : XM_001472117.1

name	EG382275 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801953 GeneID:382275 MGI:3703318
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG382275 transcript_id : NM_001025607.2

name	EG236749 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702205 GeneID:236749 MGI:3648288
definition	codon_start : 1 exception : mismatches in translation note : novel protein similar to testis derived transcript (Tes) product : similar to hypothetical protein protein_id : NP_001030036.1

name	EG245376 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126157497 GeneID:245376 MGI:3648554
definition	GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC245376 protein_id : NP_001075135.1

name	LOC546271 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271012 GeneID:546271
definition	codon_start : 1 product : similar to LOC635138 protein protein_id : XP_001478458.1

name	LOC100043957 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271065 GeneID:100043957
definition	codon_start : 1 product : similar to XMR protein_id : XP_001481311.1

name	LOC100043206 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271014 GeneID:100043206
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478465.1

name	EG546272 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271017 GeneID:546272 MGI:3643862
definition	codon_start : 1 product : similar to XMR isoform 1 protein_id : XP_001478480.1

name	EG546272 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83000007 GeneID:546272 MGI:3643862
definition	codon_start : 1 product : similar to XMR isoform 2 protein_id : XP_620960.2

name	LOC100043216 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271019 GeneID:100043216
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001478497.1

name	LOC100043216 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271021 GeneID:100043216
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001478506.1

name	EG546282 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126090646 GeneID:546282 MGI:3646322
definition	codon_start : 1 note : novel protein similar to Xlr-related, meiosis regulated (Xmr) product : hypothetical protein LOC546282 protein_id : NP_001075126.1

name	LOC100040428 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271222 GeneID:100040428
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474948.1

name	Xmr (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:100816607 GeneID:382277
definition	codon_start : 1 product : Xmr protein protein_id : NP_001035759.1

name	LOC100038977 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271230 GeneID:100038977
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001472110.1

name	LOC100038977 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271232 GeneID:100038977
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001472133.1

name	LOC100038997 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271234 GeneID:100038997
definition	codon_start : 1 product : similar to XMR protein_id : XP_001472167.1

name	EG382275 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71037366 GeneID:382275 MGI:3703318
definition	codon_start : 1 note : novel protein similar to Xlr-related, meiosis regulated (Xmr) product : similar to XMR protein_id : NP_001020778.1

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 1 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 2 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 3 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 4 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 5 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 6 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 7 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 8 pseudo : _no_value

name	LOC629204 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271015 GeneID:629204
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 5 Proteins product : hypothetical LOC629204 pseudo : _no_value transcript_id : XR_035701.1

name	LOC100040417 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271220 GeneID:100040417
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 5 Proteins product : similar to XMR pseudo : _no_value transcript_id : XR_031969.1

name	LOC100040433 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271223 GeneID:100040433
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 2 Proteins product : similar to Xlr-like pseudo : _no_value transcript_id : XR_031984.1

name	LOC100038968 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271228 GeneID:100038968
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins product : similar to Sycp3 like X-linked pseudo : _no_value transcript_id : XR_030540.1

name	LOC664810 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271237 GeneID:664810
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins product : hypothetical LOC664810 pseudo : _no_value transcript_id : XR_001649.2

clone name	MSMg01-335L15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-177M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304I16
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-241N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330C04
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-099I23.b	B6Ng01-099I23.g
ACC	DH909322	DH909323
length	1,050	1,112
definition	DH909322\|Mus musculus domesticus DNA, BAC clone: B6Ng01-099I23, 5' end.	DH909323\|Mus musculus domesticus DNA, BAC clone: B6Ng01-099I23, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttgttcagcactgagccccatcttttaagggggctatttgact ttctggagtccaccctcttgagttgtttatatatattggatattagtccc ctatctgatttaagataggtaaagatcctttcccaatctgctggtggtct ttttgtattattgacggtgtcttttgccttgcagaagctttgcagtttct tgaggtcccatttgtcaatcctcgatcttaaagcacaacccattgctgtt ctattcaggaattttttccctgtgcccatatcttcgagacttttccccac tttctcctctataagaagcagtgtctctggttttatgtgaagttccttga tccacttagatttgaccttagtacaaggagagaggaatggggtgattcgc attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaag gctgtcttttttccactagatgtttttagctgccttgttgaagatcaagt gaccataggtgtgtgcgttcatttcagggtcttcaattctattccattgg tctacttgtctgtcactatatcaataccatgcagtttttatcacaattgc tctgtagtaaagctttaggtcaggcattgtgattccaccagaggtacttt tatccttgagaagagcttttgctatcctaagttttttgttattccagatg aattttgcaaattgctctttctaattcgttgaagaattgatttgtaattt tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt tttacaatgttgatcctgcaagttccatgagcatgggagatctttccatc ttctgagaatcttctttaaatttcttttcttcagggacgtgaaaggttta tcatacagatctttcacttccttaggtagagtcacaccagatatttatat attgtggactaatggagaagggtgttgttccctaatttctgtctcagcct gcttatcctttgtggaaaagaaaagctcaatggccttggtgaagtaatct	gaattcaatgccttcatctggcctcctcaggtacaagacatacaagctgt gtacatacacacaatcaagcaaaacaaacatacccataaaataaaattta aaaaaataagtaataagggttatattaaagaattcatttttccattgtgt catataaagaaaagcacagaggagttttagaaaagaaactgacttaatat aaaattaatactgggtcaacgaaatactgttgcatgtacagaattttgta tacatatcacttagctttgaatacatggaatgtagaaaagtttacatcat ttttttcctctaaaaatcccttcaatgcagttatgaaaatgcctcagtaa taaataggatttactgtgaaaggaggacgttcgcaagtttgattctagta cccatttggaaaactaaccatggatggttgcttctacaatagcagcactg tggtaggcagagtgagaattgctaggacttgctggctgcttatctagcta catgttcagtgaaagagcaggtcttacgggaataaggtggaaagaaatag agcaaaacccaacatcctcctctgccctccacatgtgtatatatgcacca cagacacaaatatacgaaaaaattaaaattaagtttaattaatgtcacac ctgttgaaaaagcaccattttcacttctgtaccacaggcaaaaataagtc catgatgctaaatcaaaaatatttgcaagagtccgtgtcatgagtagatc ttgggtgctgacctagtcccacaatacccctagtaagctcaaatcccagg tgctctaacactaccaggatcacaggaatggccccaacatcaggagtaac tgagtccctaaagatccagggacacaggaactcctgccttgccagtgcat ggattccttctggtctgaaactgcacttgatcagacttgggtactggctt ctgcactactctaaaacacccataaggagcatgactccaggtattcttga aatgctcagatcacagatcatgagagctcgactccagagatcagaatcac tcaggaacctggattctgacgaagagcacagctgaagtacacatctttca caactgtgtatc
quality values	Open. Hide. 61 47 22 33 61 61 61 61 61 47 61 61 38 24 47 61 55 61 61 61 61 61 61 52 33 38 23 27 28 27 35 41 59 34 59 59 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 35 44 55 59 59 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 45 28 35 52 45 61 61 61 59 59 61 61 61 61 61 61 61 61 59 61 59 59 59 61 59 61 61 61 61 61 61 59 59 61 61 59 59 59 52 59 61 61 61 61 61 61 59 59 61 61 61 59 59 59 59 59 59 59 59 59 52 59 59 59 61 59 59 59 61 61 59 59 59 61 61 61 61 61 61 61 59 59 59 59 59 59 61 59 61 61 61 61 59 61 59 59 59 59 61 59 45 61 59 61 61 61 61 61 61 59 59 59 59 59 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 61 61 61 59 59 61 59 61 59 59 59 61 61 61 61 61 61 61 61 61 59 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 52 59 61 59 59 59 52 59 44 49 49 59 59 61 61 61 59 59 61 61 59 59 61 59 59 59 61 59 59 59 59 59 59 49 52 59 59 59 61 59 61 61 61 61 59 61 61 61 61 61 59 52 61 52 59 59 59 61 59 59 61 59 59 59 59 59 49 59 61 61 49 61 55 61 55 55 61 55 61 55 52 61 55 55 55 55 52 55 61 61 61 61 61 61 61 61 61 41 61 61 61 43 52 52 52 52 39 52 61 61 61 61 61 61 61 55 61 61 55 55 55 55 55 50 50 50 49 43 13 49 21 7 26 26 61 61 55 61 61 61 61 55 61 61 61 61 55 55 61 61 61 61 61 50 50 47 50 50 50 61 55 61 45 50 43 45 43 43 37 47 61 61 61 61 47 61 53 53 53 53 53 53 61 61 61 61 61 61 61 61 47 61 53 53 50 53 43 43 61 61 61 53 39 47 19 21 9 15 12 43 61 53 38 27 33 43 40 52 52 39 61 50 50 39 38 61 39 37 47 47 53 52 61 61 50 43 38 34 22 32 27 27 20 39 31 53 45 34 53 53 53 53 53 31 38 30 27 16 27 38 39 24 57 57 30 52 28 32 35 45 57 43 53 50 42 34 35 32 26 30 32 50 42 42 57 57 57 57 52 53 52 38 26 19 27 37 17 12 28 52 45 53 53 17 6 57 43 38 34 25 12 42 33 45 47 47 44 52 52 42 57 41 38 50 35 36 53 43 52 33 24 34 30 35 32 14 53 36 35 45 47 26 13 57 57 53 37 50 47 38 57 57 12 33 40 42 57 57 53 53 36 24 20 28 28 19 36 23 29 50 21 28 28 48 57 35 52 11 47 31 31 25 16 28 47 46 28 31 53 42 33 33 33 33 20 40 20 53 53 33 35 52 47 44 40 34 36 31 33 16 53 17 17 14 17 28 30 32 21 35 29 14 23 30 14 10 20 23 28 34 37 39 13 31 16 13 32 45 31 24 29 46 24 18 9 12 5 8 19 21 18 14 10 27 44 28 27 31 11 19 17 18 17 41 7 31 17 33 29 13 29 12 18 33 14 27 16 29 29 11 15 24 34 25 16 26 48 23 33 29 9 12 11 17 29 28 6 18 29 22 18 25 26 30 16 13 4 12 14 8 22 28 21 15 29 11 19 7 5 4 6 10 25 7 14 30 9 19 41 33 23 25 20 12 7 14 25 7 10 9 30 7 14 10 16 29 36 25 20 22 15 32 9 17 9 10 7 9 14 28 19 23 15 9 32 10 8 19 6 38 19 11 38 26 12 36 29 8 36 11 18 13 38 25 18 19 32 21 34 10 16 10 5 25 9 11 33 11 5 22 24 15 32 17 17 20 15 6 6 10 26 23 19 17 8 13 4 4 4 7 6 10 17 32 23 7 30 9 14 20 9 5 25 8 24 8 8 33 23 14 7 6 4 8 5 5 12 8 16 4 3 5	Open. Hide. 61 59 59 59 59 31 24 20 26 30 26 26 28 31 59 59 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 52 59 37 30 44 44 59 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 59 59 43 55 59 61 59 44 55 61 59 61 61 59 52 61 61 61 59 59 43 37 33 59 61 61 59 61 59 59 52 61 61 55 61 61 61 61 61 61 59 61 59 59 59 59 59 45 61 59 59 59 59 61 61 61 61 59 59 61 61 61 61 59 61 59 59 59 61 61 55 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 59 59 59 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 52 59 59 52 59 61 61 59 59 59 59 59 55 59 59 59 59 61 61 61 61 59 59 55 44 59 59 59 59 59 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 59 59 59 59 49 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 55 59 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 55 55 52 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 55 61 55 55 55 55 55 55 61 61 49 61 61 61 50 55 61 55 55 55 61 61 61 61 61 61 55 55 49 55 50 49 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 53 53 53 61 61 61 61 61 61 50 61 53 61 50 61 61 61 61 61 61 61 53 61 61 61 61 50 61 50 50 50 43 61 61 50 52 50 50 47 35 53 61 61 61 47 61 61 61 61 34 61 61 61 61 61 61 61 61 61 50 61 45 61 52 53 53 47 47 47 46 47 47 47 53 53 53 57 47 47 47 52 53 47 45 47 57 53 53 47 45 47 53 50 53 45 53 57 57 57 53 57 53 53 53 57 57 57 47 47 57 47 52 57 45 38 52 47 37 47 38 35 52 57 45 52 36 28 26 53 57 57 57 47 31 52 53 53 57 57 57 47 50 45 53 47 53 57 45 57 50 36 38 53 57 52 57 45 45 52 50 43 43 38 43 53 50 52 50 43 53 57 52 50 31 45 36 34 43 32 43 57 46 24 27 23 30 35 38 40 38 53 39 31 38 28 25 39 38 37 38 41 46 53 57 53 38 32 23 57 32 38 30 37 25 47 53 53 42 53 38 39 37 57 44 39 37 31 57 57 57 23 38 37 29 46 33 26 33 34 40 37 57 22 33 33 39 37 34 46 22 28 33 34 53 40 21 41 41 34 33 29 24 40 39 44 57 41 29 40 27 37 32 30 12 39 37 44 24 21 24 36 31 29 30 19 38 30 30 29 30 30 24 23 31 31 18 17 38 23 19 11 17 33 51 47 31 24 30 33 26 32 30 21 38 30 36 28 29 27 12 23 22 29 25 23 32 25 27 15 30 34 34 17 30 29 24 16 30 25 23 25 30 29 16 31 30 23 16 34 29 29 33 31 27 20 25 33 15 20 26 23 26 24 29 29 14 26 26 26 26 29 33 43 8 39 16 25 19 32 23 25 36 29 26 17 21 17 28 22 24 34 34 35 35 22 25 27 36 16 23 21 19 28 8 13 7 7 10 8 6 7 12 18 12 11 12 16 12 20 27 31 28 24 30 18 15 26 24 20 33 51 29 28 28 24 25 11 20 13 10 15 5 16 19 19 13 29 32 7 11 32 38 32 16 27 27 20 22 22 13 27 6 10 17 19 15 11 4 6 10 12 16 6 14 11 33 33 22 9 10 14 22 22 9 19 17 7 9 39 8 7 17 28 31 29 33 25 34 34 24 11 9 21 15 11 21 9 17 9 9 5 16 29 25 18 25 10 8 14 16 4 13 26 16 8 10 6 29 7 9 6 4 4 7 20 6 4 3 10 25 12 22 30 18 26 8 16 7 5 3 4 26 16 5 5 4 9 4 4 8 9 10 4 25 13 13 5 12 5 4 10 16 12 4 3 3 3 4 11 9 7 3 3 12 14 7 25 5 5 6 11 10 15 14 22 11 14 6 4 1 1 3 18 6 5 9 9 20 29 9 12 3 2 7 8 11 6 7 6 6 8 13 11 2

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_24480050_24481181
seq2: B6Ng01-099I23.g_68_1179

seq1  GAATTCAATGCCTTCATCTGGCCTCCTCAGGTACAAGACATACAAGCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCCTTCATCTGGCCTCCTCAGGTACAAGACATACAAGCTGT  50

seq1  GTACATACACACAATCAAGCAAAACAAACATACCCATAAAATAAAATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATACACACAATCAAGCAAAACAAACATACCCATAAAATAAAATTTA  100

seq1  AAAAAATAAGTAATAAGGGTTATATTAAAGAATTCATTTTTCCATTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAAGTAATAAGGGTTATATTAAAGAATTCATTTTTCCATTGTGT  150

seq1  CATATAAAGAAAAGCACAGAGGAGTTTTAGAAAAGAAACTGACTTAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAAGAAAAGCACAGAGGAGTTTTAGAAAAGAAACTGACTTAATAT  200

seq1  AAAATTAATACTGGGTCAACGAAATACTGTTGCATGTACAGAATTTTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAATACTGGGTCAACGAAATACTGTTGCATGTACAGAATTTTGTA  250

seq1  TACATATCACTTAGCTTTGAATACATGGAATGTAGAAAAGTTTACATCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATCACTTAGCTTTGAATACATGGAATGTAGAAAAGTTTACATCAT  300

seq1  TTTTTTCCTCTAAAAATCCCTTCAATGCAGTTATGAAAATGCCTCAGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCTCTAAAAATCCCTTCAATGCAGTTATGAAAATGCCTCAGTAA  350

seq1  TAAATAGGATTTACTGTGAAAGGAGGACGTTCGCAAGTTTGATTCTAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGGATTTACTGTGAAAGGAGGACGTTCGCAAGTTTGATTCTAGTA  400

seq1  CCCATTTGGAAAACTAACCATGGATGGTTGCTTCTACAATAGCAGCACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTGGAAAACTAACCATGGATGGTTGCTTCTACAATAGCAGCACTG  450

seq1  TGGTAGGCAGAGTGAGAATTGCTAGGACTTGCTGGCTGCTTATCTAGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGGCAGAGTGAGAATTGCTAGGACTTGCTGGCTGCTTATCTAGCTA  500

seq1  CATGTTCAGTGAAAGAGCAGGTCTTACGGGAATAAGGTGGAAAGAAATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTCAGTGAAAGAGCAGGTCTTACGGGAATAAGGTGGAAAGAAATAG  550

seq1  AGCAAAACCCAACATCCTCCTCTGCCCTCCACATGTGTATATATGCACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAACCCAACATCCTCCTCTGCCCTCCACATGTGTATATATGCACCA  600

seq1  CAGACACAAATATACGAAAAAATTAAAATTAAGTTTAATTAATGTCACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACAAATATACGAAAAAATTAAAATTAAGTTTAATTAATGTCACAC  650

seq1  CTGTTGAAAAAGCACCATTTTCACTTCTGTACCACAGGCAAAAATAAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGAAAAAGCACCATTTTCACTTCTGTACCACAGGCAAAAATAAGTC  700

seq1  CATGATGCTAAATCAAAAATATTTGCAAGAGTCCGTGTCATGAGTAGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGCTAAATCAAAAATATTTGCAAGAGTCCGTGTCATGAGTAGATC  750

seq1  TTGGGTGCTGACCTAGTCCCACAATACCCCTAGTAAGCTCAAATCCCAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGCTGACCTAGTCCCACAATACCCCTAGTAAGCTCAAATCCCAGG  800

seq1  TGCTCTAACACTACCAGGATCACAGGAATGGCCCCAACATCAGGAGTAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTAACACTACCAGGATCACAGGAATGGCCCCAACATCAGGAGTAAC  850

seq1  TGAGTCCCTAAGGATCCAGGGACACAGGAACTCCTGCCTTGCCAGTGGCA  900
      ||||||||||| |||||||||||||||||||||||||||||||||| |||
seq2  TGAGTCCCTAAAGATCCAGGGACACAGGAACTCCTGCCTTGCCAGT-GCA  899

seq1  TGGATTCCTTCTGGTCTGAAACTGCACCTGGATCAGACCTGGGGTACTGG  950
      |||||||||||||||||||||||||| || ||||||| || |||||||||
seq2  TGGATTCCTTCTGGTCTGAAACTGCA-CTTGATCAGA-CTTGGGTACTGG  947

seq1  C-TCTGCACCCACTCTTAAAACACCCATAGGGAGCATGACTCCCAGGTAT  999
      | |||||| | |||| ||||||||||||| ||||||||||| ||||||||
seq2  CTTCTGCA-CTACTC-TAAAACACCCATAAGGAGCATGACT-CCAGGTAT  994

seq1  TC-TGAAATGCCCAAGATCACAGGATCACAGAGGAAGCTCGACTCCCAGG  1048
      || |||||||| | |||||||| |||||  |||  |||||||||||   |
seq2  TCTTGAAATGCTC-AGATCACA-GATCA-TGAG--AGCTCGACTCC--AG  1037

seq1  AGATCAGACACACCCAGGAACACTGGAGTTCTGACAGAAGAGCACAGCTG  1098
      ||||||||  ||| ||||||| ||||| ||||||| ||||||||||||||
seq2  AGATCAGAATCACTCAGGAAC-CTGGA-TTCTGAC-GAAGAGCACAGCTG  1084

seq1  AGGGCACAACATCTTTCCCAACAACCTGTGTATC  1132
      |  | || ||||||||| |||    |||||||||
seq2  A-AGTAC-ACATCTTTCACAA----CTGTGTATC  1112

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information