MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-099O14
Chromosome	X (Build37)
Map Location	128,084,273 - 128,085,429
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC665799, LOC670449
Downstream gene	LOC245600, EG631264
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC665799 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665799
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC670449 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670449
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC245600 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:245600
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 14 Proteins pseudo : _no_value

name	EG631264 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:631264 MGI:3643915
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC670449 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272262 GeneID:670449
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to retinitis pigmentosa GTPase regulator transcript_id : XM_001475063.1

name	LOC670449 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272263 GeneID:670449
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475113.1

name	LOC665799 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665799
definition	number : 3 pseudo : _no_value

name	LOC665799 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665799
definition	number : 2 pseudo : _no_value

name	LOC665799 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665799
definition	number : 1 pseudo : _no_value

name	EG631264 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:631264
definition	number : 2 pseudo : _no_value

name	EG631264 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:631264
definition	number : 1 pseudo : _no_value

name	LOC245600 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272264 GeneID:245600
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 14 Proteins product : similar to transforming acidic coiled-coil containing protein 1 long pseudo : _no_value transcript_id : XR_032090.1

clone name	MSMg01-376B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396K17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-455C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283C17
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-099O14.b	B6Ng01-099O14.g
ACC	DH909572	DH909573
length	1,172	1,138
definition	DH909572\|Mus musculus domesticus DNA, BAC clone: B6Ng01-099O14, 5' end.	DH909573\|Mus musculus domesticus DNA, BAC clone: B6Ng01-099O14, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcacctgaggaataccaaatgactgagaaacacctgaaataaat tttcagcgtccttaatcatcagggaaatgcaaatcaaaacaaccctgaga ttctacctcataccagtcagaatgactaagttcaaaaattcaggtgacag cagatgctggcaaggatgtggagaaagagggacactcctccattgttggt ggaattgcaagcttttacaatcactggaaatcagtctggtggtatctcag aaaattggacatggtactactggaggatctagcaatacctctcctggtca tatattcagaagatgttccaaccggtaaggaggccacatgctccactatg ttcatagcagccttatttataataggcagaagctggaaagaatctagatg cccctcaacaaaggaatggatacagaaaatgtggtacatttacacaatgg agtactactcagatattaaaaagaatgtatttatgaaattccttggcaaa tggatggaccttgagggcatcatcctgagtgaggtaacccaatcacaaaa gaactcacatgatatgtactcactgataagtggataatagcccagaaact tagaatacccaagatacaagatactatttgcaaaacacgtgaaaatcaag aagaacgaagaccaaagtgtggacattttgccccttcttagatttgggaa caaaacacccatggaaggagtcacagagacaacatttggagctgagatga aaaggatggaccatctagagactgccatacctggggatccatcccataac cagcctccaaagactgacaccattgcaatcactaggaagattttggtgaa aggaccctgatatagctgtctcttgtgagtctatgctggggcctagcaaa cacagaagtggatgctcacagtcagctattggatggatcacagaacgaac ccccaatggtagagctagagaaattacccaaggaggtaaagggatctgca acctatagtggacacaatatgaactaaccagtactgctgggagctcgttt ctctacggcatatgtatcaaagatggcctagtcgcatcattgaaagaaaa ggtccatgggtctgcaatttaatgcccagtacaggaacgcagccagaagt gaatggtgtggggatggggagt	gaattcaaggcaagaactggaaaaaaaaagaaaatgatgcaaaggctata aatgaacgtaccttattggccagctccccatgtcccactccacctgcatt cttatagcactgaccaccaacacaggattggtaccatccacagtgaagtg ggtcatcctacatcaatcatcaacttctaaatgcatcagaagcttgccct caaagcttgcctcaaagcgggtttgggcatttggacaaggaagtcccctc ttctcaaatgatactagtctgagtttgtgttgagtcactacctcagtgtg tgtatgtatgaatggtagaaaagtgaagaaagaatatcttaaaaaccata tagcttataagtaaatatttaaacatgctttattttaggtgtactttatg catgtttcctgaatagtttgcagtcttagatacttattgtgaagatatag agatataaattccaaagtatttggattactggggtactgtcctcggaagg gataagtataattcttgtggggtccctagttcttaaatgctttttataaa ataacaaacgttgccattccccctctctgcatcccatgtcacacatactc ccaccatgatgcaatctgagattaaaccttatctctcaccatgatcccat acataaagctggcctatcttggactttcaacctagaaacctctaaccaaa gtaaaaccccttaaaaatccaaccttccgtatttctttataaaaaaaaat gaagttataaagaaactttattcactaagccaattccccaggctctacaa taatgcttgacactagatgttaggtcaaaagggaaaagcagttaatttca tactaagaaaaatttggaataatttattttaagacacaatataagtggtt aagttaaatcaattttagtcaaagaagaatagcttaattagaactacatg atgattttcttaataaattttattattgcaatattaatgtattctgaaaa agtaaatgatctgtcaaatttcatgctgctgtatatgggtaatattgaga tggggtagaagagttatcattttaagataatgaaattactttattcttgc ttctttaattttttggagatggtagccattgcctttac
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Alignment Information

BAC End 1

BAC End 2

seq1: chrX_128084273_128085429
seq2: B6Ng01-099O14.g_69_1206

seq1  GAATTCAAGGCAAGAACTGGAAAAAAAAAGAAAATGATGCAAAGGCTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCAAGAACTGGAAAAAAAAAGAAAATGATGCAAAGGCTATA  50

seq1  AATGAACGTACCTTATTGGCCAGCTCCCCATGTCCCACTCCACCTGCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACGTACCTTATTGGCCAGCTCCCCATGTCCCACTCCACCTGCATT  100

seq1  CTTATAGCACTGACCACCAACACAGGATTGGTACCATCCACAGTGAAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGCACTGACCACCAACACAGGATTGGTACCATCCACAGTGAAGTG  150

seq1  GGTCATCCTACATCAATCATCAACTTCTAAATGCATCAGAAGCTTGCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATCCTACATCAATCATCAACTTCTAAATGCATCAGAAGCTTGCCCT  200

seq1  CAAAGCTTGCCTCAAAGCGGGTTTGGGCATTTGGACAAGGAAGTCCCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTTGCCTCAAAGCGGGTTTGGGCATTTGGACAAGGAAGTCCCCTC  250

seq1  TTCTCAAATGATACTAGTCTGAGTTTGTGTTGAGTCACTACCTCAGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAATGATACTAGTCTGAGTTTGTGTTGAGTCACTACCTCAGTGTG  300

seq1  TGTATGTATGAATGGTAGAAAAGTGAAGAAAGAATATCTTAAAAACCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTATGAATGGTAGAAAAGTGAAGAAAGAATATCTTAAAAACCATA  350

seq1  TAGCTTATAAGTAAATATTTAAACATGCTTTATTTTAGGTGTACTTTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTATAAGTAAATATTTAAACATGCTTTATTTTAGGTGTACTTTATG  400

seq1  CATGTTTCCTGAATAGTTTGCAGTCTTAGATACTTATTGTGAAGATATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTCCTGAATAGTTTGCAGTCTTAGATACTTATTGTGAAGATATAG  450

seq1  AGATATAAATTCCAAAGTATTTGGATTACTGGGGTACTGTCCTCGGAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATAAATTCCAAAGTATTTGGATTACTGGGGTACTGTCCTCGGAAGG  500

seq1  GATAAGTATAATTCTTGTGGGGTCCCTAGTTCTTAAATGCTTTTTATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGTATAATTCTTGTGGGGTCCCTAGTTCTTAAATGCTTTTTATAAA  550

seq1  ATAACAAACGTTGCCATTCCCCCTCTCTGCATCCCATGTCACACATACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAAACGTTGCCATTCCCCCTCTCTGCATCCCATGTCACACATACTC  600

seq1  CCACCATGATGCAATCTGAGATTAAACCTTATCTCTCACCATGATCCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATGATGCAATCTGAGATTAAACCTTATCTCTCACCATGATCCCAT  650

seq1  ACATAAAGCTGGCCTATCTTGGACTTTCAACCTAGAAACCTCTAACCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAGCTGGCCTATCTTGGACTTTCAACCTAGAAACCTCTAACCAAA  700

seq1  GTAAAACCCCTTAAAAATCCAACCTTCCGTATTTCTTTATAAAAAAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACCCCTTAAAAATCCAACCTTCCGTATTTCTTTATAAAAAAAAAT  750

seq1  GAAGTTATAAAGAAACTTTATTCACTAAGCCAATTCCCCAGGCTCTACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTATAAAGAAACTTTATTCACTAAGCCAATTCCCCAGGCTCTACAA  800

seq1  TAATGCTTGACACTAGATGTTAGGTCAAAAGGGAAAAGCAGTTAAATTTC  850
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TAATGCTTGACACTAGATGTTAGGTCAAAAGGGAAAAGCAGTT-AATTTC  849

seq1  ATACTAAGAAAAATTTGGAATAATTTAATTTTAAGACACAATATAAGTGG  900
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATACTAAGAAAAATTTGGAATAATTT-ATTTTAAGACACAATATAAGTGG  898

seq1  TTAAGTTAAATCAATTTTAGTCAAAGAAGAATAGCTTAATTAGAACTACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTAAATCAATTTTAGTCAAAGAAGAATAGCTTAATTAGAACTACA  948

seq1  TGATGA-TTTCTTAATAAATTTTATTATTGCAATATTAATGTTAATTTCC  999
      |||||| |||||||||||||||||||||||||||||||||||  |||  |
seq2  TGATGATTTTCTTAATAAATTTTATTATTGCAATATTAATGT--ATT--C  994

seq1  TGAAAAAAGTAAATGATCCTGTCAGATTTCCAATGCTGCTGTATATGGTT  1049
      || |||||||||||||| |||||| |||||  |||||||||||||||| |
seq2  TG-AAAAAGTAAATGAT-CTGTCAAATTTC--ATGCTGCTGTATATGGGT  1040

seq1  AAATATTGAAGATGGGGTAGAAGAGTTATCATTTTAGAGTACATGAAAAT  1099
       ||||||| ||||||||||||||||||||||||||| ||   ||| ||||
seq2  -AATATTG-AGATGGGGTAGAAGAGTTATCATTTTA-AGATAATG-AAAT  1086

seq1  TACTTTATTCTTGCTTCTTTTATTTTTCTTTTGAGATTTGTAGCCATTTG  1149
      |||||||||||||||||||| ||||   ||| |||| | ||||||| |||
seq2  TACTTTATTCTTGCTTCTTTAATTT---TTTGGAGA-TGGTAGCCA-TTG  1131

seq1  CTCTTTAC  1157
      | ||||||
seq2  C-CTTTAC  1138

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information