BAC Information

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BAC

Clone NameB6Ng01-100H24
ChromosomeX (Build37)
Map Location 81,499,218 - 81,500,154
singlet/doubletsinglet
Overlap geneDmd
Upstream geneTsga8
Downstream geneLOC100042306, LOC100042296, LOC669833, 1600014K23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100H24.bB6Ng01-100H24.g
ACCDH909982DH909983
length9351,190
definitionDH909982|Mus musculus domesticus DNA, BAC clone: B6Ng01-100H24, 5' end.DH909983|Mus musculus domesticus DNA, BAC clone: B6Ng01-100H24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatataaatgggacatataatattaactactttgatcatcatatg
gtttttgagattcatctacattgtaagtggaacagcgactcacttggttt
gatgaattaatattccatataaatatattccacaattttctgttcttctt
tagaaggatattcatattgtttccagataaatataccatgaaaatatatg
tagaagacttttgtcaagatttgatttcagttgcttattaagaaatttct
aaatatggataaaatatttcattgtacaatataatatcaacttgggccaa
acaaatggttcagaggctaatggtgtccacctactgtttgaattgatgat
ctgacttgatatttgagacccatatatggtgaaagggagaactgactaac
acacaaaagttgtcgtctggctgccacttgcacattgtgatatggcaatt
tcctccacacagaaacaattaaatatatgagacagtataataagaagata
ttcagttttaaaaagcctttttgtggtatttttattggatattttctctt
tttatctttttattgaatatattctttatttttcaaatgttgtccccctt
cccagtttccacccctgaaaccccctatcccatccaccctccccctgctt
ctatgagtgtgtcccccccccacctaccctctcctcctaccctccctggc
attcccctacactggggcatggagctttcacaggaccaaaggcatctcct
cccattgatgtccaacaaggccatcctctgctacacatgcagctggagcc
acaagaccctccatatgtacaatttggttggtggttagagtctgagagct
tcttgggggggtctggttggttgataatgttgttcttcctatgggctgca
aaccccttcagccctgcagtctttttctaactcct
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagttgattatt
tcctgccatctactcctcttgggtgaatttgcttcctttttttctagggc
ttttagatgtgttgtcaagctgctagtatgtgctgtctcccggtttcttc
ttggaggcactcagcgctatgagtttccctcttagaattgcttcattgtg
tcctcatagttgggtacgttggtggccttcattttattaaacctcaaaag
tcttaattctttcttaattccttctgtgaccaaggtatcattggaaggag
tctattcgtttccacgtaatgtgtcttcctatattaaggtgtattgagat
agtcctaaggccagggggactcgataaggatactcaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_81499218_81500154
seq2: B6Ng01-100H24.b_43_977

seq1  GAATTCATATAAATGGGACATATAATATTAACTACTTTGATCATCATATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATAAATGGGACATATAATATTAACTACTTTGATCATCATATG  50

seq1  GTTTTTGAGATTCATCTACATTGTAAGTGGAACAGCGACTCACTTGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGAGATTCATCTACATTGTAAGTGGAACAGCGACTCACTTGGTTT  100

seq1  GATGAATTAATATTCCATATAAATATATTCCACAATTTTCTGTTCTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATTAATATTCCATATAAATATATTCCACAATTTTCTGTTCTTCTT  150

seq1  TAGAAGGATATTCATATTGTTTCCAGATAAATATACCATGAAAATATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGATATTCATATTGTTTCCAGATAAATATACCATGAAAATATATG  200

seq1  TAGAAGACTTTTGTCAAGATTTGATTTCAGTTGCTTATTAAGAAATTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGACTTTTGTCAAGATTTGATTTCAGTTGCTTATTAAGAAATTTCT  250

seq1  AAATATGGATAAAATATTTCATTGTACAATATAATATCAACTTGGGCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGGATAAAATATTTCATTGTACAATATAATATCAACTTGGGCCAA  300

seq1  ACAAATGGTTCAGAGGCTAATGGTGTCCACCTACTGTTTGAATTGATGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGGTTCAGAGGCTAATGGTGTCCACCTACTGTTTGAATTGATGAT  350

seq1  CTGACTTGATATTTGAGACCCATATATGGTGAAAGGGAGAACTGACTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTGATATTTGAGACCCATATATGGTGAAAGGGAGAACTGACTAAC  400

seq1  ACACAAAAGTTGTCGTCTGGCTGCCACTTGCACATTGTGATATGGCAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAAGTTGTCGTCTGGCTGCCACTTGCACATTGTGATATGGCAATT  450

seq1  TCCTCCACACAGAAACAATTAAATATATGAGACAGTATAATAAGAAGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCACACAGAAACAATTAAATATATGAGACAGTATAATAAGAAGATA  500

seq1  TTCAGTTTTAAAAAGCCTTTTTGTGGTATTTTTATTGGATATTTTCTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTTTAAAAAGCCTTTTTGTGGTATTTTTATTGGATATTTTCTCTT  550

seq1  TTTATCTTTTTATTGAATATATTCTTTATTTTTCAAATGTTGTCCCCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTTTTTATTGAATATATTCTTTATTTTTCAAATGTTGTCCCCCTT  600

seq1  CCCAGTTTCCACCCCTGAAACCCCCTATCCCATCCACCCTCCCCCTGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTTCCACCCCTGAAACCCCCTATCCCATCCACCCTCCCCCTGCTT  650

seq1  CTATGAGTGTGTCCCCCCCCCACCTACCCTCTCCTCCTACCCTCCCTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGTGTGTCCCCCCCCCACCTACCCTCTCCTCCTACCCTCCCTGGC  700

seq1  ATTCCCCTACACTGGGGCATGGAGCTTTCACAGGACCAAAGGCATCTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCCTACACTGGGGCATGGAGCTTTCACAGGACCAAAGGCATCTCCT  750

seq1  CCCATTGATGTCCAACAAGGCCATCCTCTGCTACACATGCAGCTGGAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTGATGTCCAACAAGGCCATCCTCTGCTACACATGCAGCTGGAGCC  800

seq1  ACAAGACCCTCCATATGTACAATTTGGTTGGTGGTTTAGAGTCTGAGAGC  850
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACAAGACCCTCCATATGTACAATTTGGTTGGTGG-TTAGAGTCTGAGAGC  849

seq1  -TCTTGGGGGGGTCTGGTTGGTTGATATTGTTGTTCTTCCTATGGGGCTG  899
       |||||||||||||||||||||||||| ||||||||||||||| ||||||
seq2  TTCTTGGGGGGGTCTGGTTGGTTGATAATGTTGTTCTTCCTAT-GGGCTG  898

seq1  CAAACCCCTTCAGCCCTGCCAGTCTTTTTCTAACTCCT  937
      |||||||||||||||||| |||||||||||||||||||
seq2  CAAACCCCTTCAGCCCTG-CAGTCTTTTTCTAACTCCT  935