MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-100M21
Chromosome	X (Build37)
Map Location	158,323,844 - 158,324,884
singlet/doublet	singlet
Overlap gene	Nhs
Upstream gene	Gja6, Scml2, LOC414364, Prkaca-ps1, Rai2, Gm47
Downstream gene	Reps2, LOC654358, LOC100041557, LOC667630, Rbbp7, 4932441K18Rik, LOC671250, Syap1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gja6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:414089 MGI:95717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scml2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107815 MGI:1340042
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC414364 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:414364
definition	note : vitamin K epoxide reductase complex, subunit 1-like 1 pseudogene 5 pseudo : _no_value

name	Prkaca-ps1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:237188
definition	note : protein kinase, cAMP dependent, catalytic, alpha pseudogene 1 pseudo : _no_value

name	Rai2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24004 MGI:1344378
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm47 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:195726 MGI:2684893
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Nhs (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:195727 MGI:2684894
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Reps2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:194590 MGI:2663511
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC654358 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:654358
definition	note : ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene pseudo : _no_value

name	LOC100041557 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041557
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC667630 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667630
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Rbbp7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245688 MGI:1194910
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4932441K18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:353170 MGI:3590652
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC671250 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	Syap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67043 MGI:1914293
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gja6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47894400 GeneID:414089 MGI:95717
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gap junction membrane channel protein alpha 6 transcript_id : NM_001001496.1

name	Scml2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118403327 GeneID:107815 MGI:1340042
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sex comb on midleg-like 2 (Drosophila) transcript_id : NM_133194.3

name	Rai2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803061 GeneID:24004 MGI:1344378
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinoic acid induced 2 transcript_id : NM_198409.2

name	Gm47 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83004682 GeneID:195726 MGI:2684893
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : gene model 47, (NCBI) transcript_id : XM_112125.5

name	Nhs (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486677 GeneID:195727 MGI:2684894
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Nance-Horan syndrome (human) transcript_id : NM_001081052.1

name	Reps2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84490400 GeneID:194590 MGI:2663511
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RALBP1 associated Eps domain containing protein 2 transcript_id : NM_178256.3

name	Rbbp7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982058 GeneID:245688 MGI:1194910
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinoblastoma binding protein 7 transcript_id : NM_009031.2

name	4932441K18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369021 GeneID:353170 MGI:3590652
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932441K18 gene transcript_id : NM_178935.3

name	Syap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385423 GeneID:67043 MGI:1914293
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synapse associated protein 1 transcript_id : NM_025932.1

name	Gja6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47894401 CCDS:CCDS30506.1 GeneID:414089 MGI:95717
definition	GO_component : GO:0005922 - connexon complex [Evidence IEA]; GO:0005921 - gap junction [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015285 - connexon channel activity [Evidence IEA]; GO:0005243 - gap-junction forming channel activity [Evidence IEA] GO_process : GO:0007154 - cell communication [Evidence IEA]; GO:0007267 - cell-cell signaling [Evidence IEA] codon_start : 1 note : connexin 33 product : gap junction membrane channel protein alpha 6 protein_id : NP_001001496.1

name	Scml2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118403328 GeneID:107815 MGI:1340042
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 product : sex comb on midleg-like 2 protein_id : NP_573457.3

name	Rai2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38259196 CCDS:CCDS30507.1 GeneID:24004 MGI:1344378
definition	codon_start : 1 exception : mismatches in translation product : retinoic acid induced 2 protein_id : NP_940801.1

name	Gm47 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83004683 GeneID:195726 MGI:2684893
definition	codon_start : 1 product : hypothetical protein LOC195726 protein_id : XP_112125.5

name	Nhs (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486678 GeneID:195727 MGI:2684894
definition	codon_start : 1 product : Nance-Horan syndrome protein_id : NP_001074521.1

name	Reps2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84490401 CCDS:CCDS30508.1 GeneID:194590 MGI:2663511
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 note : RALBP1-associated Eps domain containing protein 2 product : RalBP1 associated Eps domain containing protein 2 protein_id : NP_839987.2

name	Rbbp7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982059 CCDS:CCDS30509.1 GeneID:245688 MGI:1194910
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0016581 - NuRD complex [Evidence IDA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006338 - chromatin remodeling [Evidence TAS]; GO:0006260 - DNA replication [Evidence IEA]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : G1/S transition control protein-binding protein; histone acetyltransferase type B subunit 2 product : retinoblastoma binding protein 7 protein_id : NP_033057.2

name	4932441K18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725808 CCDS:CCDS30510.1 GeneID:353170 MGI:3590652
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA] codon_start : 1 note : lipopolysaccharide-specific response protein 5; factor inhibiting activating transcription factor 4 (ATF4)-mediated transcription product : gamma-taxilin protein_id : NP_849266.1

name	Syap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385424 CCDS:CCDS30511.1 GeneID:67043 MGI:1914293
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] codon_start : 1 exception : mismatches in translation product : synapse associated protein 1 protein_id : NP_080208.1

name	LOC100041557 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041557
definition	number : 1 pseudo : _no_value

name	LOC667630 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667630
definition	number : 1 pseudo : _no_value

name	LOC671250 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671250
definition	number : 1 pseudo : _no_value

name	LOC671250 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671250
definition	number : 2 pseudo : _no_value

name	LOC671250 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671250
definition	number : 3 pseudo : _no_value

clone name	MSMg01-361J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357P01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-133C21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-517J21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-368E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194K11
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-100M21.b	B6Ng01-100M21.g
ACC	DH910189	DH910190
length	1,133	1,043
definition	DH910189\|Mus musculus domesticus DNA, BAC clone: B6Ng01-100M21, 5' end.	DH910190\|Mus musculus domesticus DNA, BAC clone: B6Ng01-100M21, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcattgtttttaaatagctgagtaggactctattatgtaaatgtac cacactttccatatccattcttctgttgaaggacatctgggttctttcca gcttatggttattaggcctctattagataaaggattggtaaagatctttc cccagtctgttggttgcctttttgttctattgatagtgtctgcatgacat ctgcccaggatcttctgactttcatagtctgtcgagacgtctggtgtaat tctgataggcctgcctttatatgttacttgacccttttcccttactgctt ttaatattttctttgttttgtgcatttgatgttttgattactatgtgaca agaggaattttttttctggtctaatgtatttggaattctgtaggcttctt gtatgctcatgggaataagttttaggttggggaagttttcttctataatt ttgttgaagatatttactggccctttaagttgaaaatcttcattctcatc tactcctattatccttaggtttggtcttctcattgtgtcctggatttcct ggatgttttgggttaggagctctttgcattttgcattttcttttactgtt gtgtctatgttttctatcttctgcatctgagattctctcttctatcttgt attctgttgttgatgttcgcatctataactcctgacttctttcctaggtt ttctttctccagagttgtctccctttgggttttctttattgtttctactt ccatttttagatcctggatggttttgttcaattctatcacctgtttggta gtgttttcctgtagctctctaagggatttttgtgtttcctctttaaaggt ttctagctgtttacctgtgttttcttgtatttccttcttaaagtcctcca tcatcatcatgagagtgattttagatccatgtcttgcttttctggtgtga tggtgtatcaggtcttgctacagtgggagagcttggttctgatatgccaa gtaacttggttctgttgctctgttcttgtgcctggctcctgccactgata tctcaggtgctgctgccctcaattatctgaatgggagtcgtcctcttttt tcccatatttttatggggaattatatttcattc	gaattcctcttttgtatctatctaaatttcttccactgtagttttgtaga tgaataaaacccatagctggtacaaaacaccatttgagctttttgtgtct gtttcatttcactgccaaactcctcagggagtcattaacaagcaacaaca acaatcacacatatttccactaaacatttgcttgggataacatgtgacat tgccagcgatattgagaggtgttgtttaaggtatgtgaacgtggctaggt ggctaaggaagtctgtgaggaatatggaagggagggagacaataatgaat ggctagaagcaaagcagcctggggtgagggggttatttttggtgatgagc cttataggatggctagagtctatgtgagaaaagcattgtacctccacaaa caaagcagagtaaccaaactaagtccatctgctaccctggataatcctct tctgggttgtttgatatgaaagcagaatgcagaaagagcacaaaacaaga aataaaaagtgttcagatagttcacaccctgagcacttgcatggaatcca gatttgtaccttccagaggagtttgtatttttctgttgctgttccaatgt ttatcactaatatcaccactctattgttgcatgtacactctaagcttcaa catagctcttatttctggtaaggtcacggggctatctctggtaccctggg tatccttctagagttcttggcatgggtacccttgaggttaccctaggatc tataaggcaacagggtagaagtttggtttctgggcctgtttatctcaagg gaatgcagcctaggttgaaatgcttctggaaccctaaaataaaaagagcc aattttcatagacaagcgaggcaatagagcattttttctctatgagacaa agaaaagtgacagcttgcaaataatgactaaaagtagtggacatagaagt tggctaggaaagtccatgagtccaagatcatgagatttgtactttagtat catcatcattattattattttgcctctgccccaactcagtcta
quality values	Open. Hide. 61 47 43 38 61 38 29 61 61 47 61 61 61 61 59 43 61 61 61 59 59 61 61 61 61 18 18 12 10 12 14 12 21 13 28 26 43 59 59 59 59 61 61 61 61 59 59 61 61 61 59 61 61 61 61 61 61 61 59 59 59 61 61 61 61 59 59 61 49 52 28 30 41 30 37 28 36 44 55 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 59 43 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 55 32 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 57 57 57 57 57 53 57 53 57 53 57 53 57 53 46 47 57 57 57 57 53 57 53 57 53 57 57 53 57 53 57 53 57 57 57 57 34 51 39 57 53 53 57 57 57 57 53 53 42 53 53 53 53 57 57 45 53 53 45 53 53 52 53 53 57 50 57 45 52 45 57 53 57 53 42 53 53 53 38 41 53 53 45 57 45 53 43 47 46 53 52 52 57 53 42 33 57 46 45 46 45 50 32 52 37 57 57 28 38 52 46 37 38 53 45 47 39 37 53 36 50 53 53 38 50 39 37 38 38 39 53 50 50 57 52 27 57 57 27 34 35 57 47 47 27 37 43 21 57 25 50 42 42 52 52 37 36 53 32 53 57 57 57 37 53 42 42 44 36 57 37 57 42 40 36 57 57 18 57 57 52 53 42 44 37 40 33 41 40 41 31 48 41 40 37 46 33 33 53 20 57 37 30 30 22 48 35 23 53 29 57 57 35 30 48 30 44 21 41 28 34 39 30 44 30 29 14 44 21 46 24 38 23 51 51 47 43 33 25 36 18 44 13 12 24 29 30 29 46 37 38 36 26 31 36 30 45 32 31 28 30 29 33 29 30 24 48 29 35 33 33 29 46 32 43 35 51 51 29 28 25 26 33 23 34 33 51 26 12 39 25 33 14 15 29 31 51 33 19 29 24 21 33 23 26 24 29 34 28 29 26 24 29 29 28 21 29 43 28 26 20 7 21 34 12 51 51 28 31 19 29 20 14 29 19 26 41 24 25 39 14 29 25 39 51 51 23 25 24 30 30 19 20 9 20 30 15 39 27 7 21 13 12 7 22 19 13 27 21 27 19 23 24 19 30 17 30 23 17 25 38 51 23 28 9 35 14 18 22 25 17 17 7 6 8 26 22 38 11 31 13 17 9 15 9 20 30 7 13 12 10 4 16 19 29 28 23 16 11 8 7 33 34 13 19 6 8 24 22 5 11 14 8 9 6 26 9 8 30 9 8 19 10 8 29 12 20 11 15 8 5 18 16 21 24 14 17 12 17 9 21 8 7 5 7 7 8 8 7 5 14 17 37 12 9 11 22 9 6 6 7 9 19 13 12 24 21 23 16 9 8 15 5 4 3 3 4 20 15 10 6 3 25 27 29 26 23 23 27 11 3 5 4 8 27 31 18 7 4 4 2 5 25 20 6 4 13 7 5 6 4 12 25 9 9 10 3 3 3	Open. Hide. 61 61 41 47 61 15 16 12 13 10 36 29 28 22 35 43 52 49 52 55 61 61 61 61 61 61 61 61 61 61 61 61 61 59 49 61 61 61 61 61 61 61 61 61 61 61 61 38 24 45 30 26 28 26 32 32 31 59 59 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 52 55 61 61 55 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 55 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 50 61 61 61 61 61 61 52 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 53 61 61 61 61 61 61 53 52 53 52 53 53 53 61 61 61 43 53 47 53 53 53 61 61 61 61 61 61 61 46 47 47 47 45 33 42 61 61 61 53 48 47 47 47 47 47 47 33 47 45 51 31 57 57 45 57 57 57 57 50 50 57 57 57 57 57 57 57 53 52 57 57 50 57 53 53 36 47 40 38 53 53 57 52 57 53 53 53 53 53 53 53 53 57 57 57 53 57 53 53 53 53 57 57 53 52 57 57 57 57 33 57 57 50 53 57 57 53 38 57 53 57 57 53 45 52 52 50 53 53 52 40 37 40 39 32 39 38 38 53 52 52 53 52 53 39 57 52 53 43 43 43 30 50 33 22 52 38 52 42 47 53 57 46 52 50 37 30 52 53 52 53 45 46 46 24 28 26 41 47 38 57 37 41 38 37 37 30 37 37 52 30 42 40 50 53 37 50 42 43 48 40 53 53 36 38 37 57 53 53 35 27 34 46 53 52 41 53 53 30 57 23 31 24 39 37 41 40 44 30 29 26 32 42 42 35 42 47 53 17 57 25 37 37 40 29 29 57 33 44 48 32 40 33 30 53 57 16 37 57 44 57 27 28 35 44 57 27 17 45 31 53 44 57 37 34 37 26 26 37 8 20 24 45 16 18 44 32 44 30 29 14 31 45 19 18 8 8 9 10 24 32 45 30 30 31 23 23 48 33 35 44 24 17 17 25 36 30 29 21 45 33 36 28 20 51 36 47 48 14 47 16 37 29 17 31 28 51 51 14 18 18 18 35 18 24 19 18 29 21 29 29 31 29 31 25 33 34 26 19 24 38 21 29 20 35 51 51 51 51 31 28 34 29 32 28 35 19 29 18 36 17 32 37 31 32 43 29 41 31 23 32 27 27 28 18 28 10 10 25 21 12 9 28 22 16 18 32 19 18 27 23 7 7 22 21 29 19 30 34 21 41 31 18 14 12 21 11 7 16 29 30 11 18 25 31 27 28 15 12 12 9 19 36 31 23 11 11 24 20 28 24 22 7 11 25 28 22 14 11 22 20 27 10 4 12 22 9 28 9 15 6 8 8 6 38 29 38 18 6 5 7 9 12 8 13 21 12 11 35 9 9 18 29 33 33 16 21 14 22 24 31 51 51 33 18 29 9 22 24 19 18 24 25 31 7 6 18 24 22 12 6 35 12 7 6 10

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_158323844_158324884
seq2: B6Ng01-100M21.g_67_1109 (reverse)

seq1  TAGACCTGAGTTGGGGCAGAGGCAAAATAATAATAATGATGATGATACTA  50
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGA-CTGAGTTGGGGCAGAGGCAAAATAATAATAATGATGATGATACTA  49

seq1  AAGTACAAATCTCCTGATCTTGGACTCATGGACTTTCCTAGCCAACTTCT  100
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAGTACAAATCTCATGATCTTGGACTCATGGACTTTCCTAGCCAACTTCT  99

seq1  ATGTCCACTACTTTTAGTCATTATTTGCAAGCTGTCACTTTTCTTTGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCACTACTTTTAGTCATTATTTGCAAGCTGTCACTTTTCTTTGTCT  149

seq1  CATAGAG-AAAAATGCTCTATTGCCTCGCTTGTCTATG-AAATTGGCTCT  198
      ||||||| |||||||||||||||||||||||||||||| |||||||||||
seq2  CATAGAGAAAAAATGCTCTATTGCCTCGCTTGTCTATGAAAATTGGCTCT  199

seq1  TTTTATTTTAGGGTTCCAGAAGCATTTCAACCTAGGCTGCATTCCC-TGA  247
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTTATTTTAGGGTTCCAGAAGCATTTCAACCTAGGCTGCATTCCCTTGA  249

seq1  GATAAACAGGCCCAGAAACCAAACTTCTACCCTGTTGCCTTATAGATCCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAACAGGCCCAGAAACCAAACTTCTACCCTGTTGCCTTATAGATCCT  299

seq1  AGGGTAACCTCAAGGGTACCCATGCCAAGAACTCTAGAAGGATACCCAGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAACCTCAAGGGTACCCATGCCAAGAACTCTAGAAGGATACCCAGG  349

seq1  GTACCAGAGATAGCCCCGTGACCTTACCAGAAATAAGAGCTATGTTGAAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAGAGATAGCCCCGTGACCTTACCAGAAATAAGAGCTATGTTGAAG  399

seq1  CTTAGAGTGTACATGCAACAATAGAGTGGTGATATTAGTGATAAACATTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGTGTACATGCAACAATAGAGTGGTGATATTAGTGATAAACATTG  449

seq1  GAACAGCAACAGAAAAATACAAACTCCTCTGGAAGGTACAAATCTGGATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGCAACAGAAAAATACAAACTCCTCTGGAAGGTACAAATCTGGATT  499

seq1  CCATGCAAGTGCTCAGGGTGTGAACTATCTGAACACTTTTTATTTCTTGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCAAGTGCTCAGGGTGTGAACTATCTGAACACTTTTTATTTCTTGT  549

seq1  TTTGTGCTCTTTCTGCATTCTGCTTTCATATCAAACAACCCAGAAGAGGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCTCTTTCTGCATTCTGCTTTCATATCAAACAACCCAGAAGAGGA  599

seq1  TTATCCAGGGTAGCAGATGGACTTAGTTTGGTTACTCTGCTTTGTTTGTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCAGGGTAGCAGATGGACTTAGTTTGGTTACTCTGCTTTGTTTGTG  649

seq1  GAGGTACAATGCTTTTCTCACATAGACTCTAGCCATCCTATAAGGCTCAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTACAATGCTTTTCTCACATAGACTCTAGCCATCCTATAAGGCTCAT  699

seq1  CACCAAAAATAACCCCCTCACCCCAGGCTGCTTTGCTTCTAGCCATTCAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAAAATAACCCCCTCACCCCAGGCTGCTTTGCTTCTAGCCATTCAT  749

seq1  TATTGTCTCCCTCCCTTCCATATTCCTCACAGACTTCCTTAGCCACCTAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCTCCCTCCCTTCCATATTCCTCACAGACTTCCTTAGCCACCTAG  799

seq1  CCACGTTCACATACCTTAAACAACACCTCTCAATATCGCTGGCAATGTCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGTTCACATACCTTAAACAACACCTCTCAATATCGCTGGCAATGTCA  849

seq1  CATGTTATCCCAAGCAAATGTTTAGTGGAAATATGTGTGATTGTTGTTGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTATCCCAAGCAAATGTTTAGTGGAAATATGTGTGATTGTTGTTGT  899

seq1  TGCTTGTTAATGACTCCCTGAGGAGTTTGGCAGTGAAATGAAACAGACAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTTAATGACTCCCTGAGGAGTTTGGCAGTGAAATGAAACAGACAC  949

seq1  AAAAAGCTCAAATGGTGTTTTGTACCAGCTATGGGTTTTATTCATCTACA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCTCAAATGGTGTTTTGTACCAGCTATGGGTTTTATTCATCTACA  999

seq1  AAACTACAGTGGAAGAAATTTAGATAGATACAAAAGAGGAATTC  1041
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACAGTGGAAGAAATTTAGATAGATACAAAAGAGGAATTC  1043

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information