BAC Information

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BAC

Clone NameB6Ng01-101N08
ChromosomeX (Build37)
Map Location 140,555,198 - 140,555,739
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC209541, Chrdl1, Pak3, Capn6, Dcx
Downstream geneLOC666628, LOC666633, LOC100039378, LOC100039243, Alg13, LOC100039407, Trpc5, LOC100039436, Zcchc16, LOC666655
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101N08.bB6Ng01-101N08.g
ACCDH910899DH910900
length1,1311,262
definitionDH910899|Mus musculus domesticus DNA, BAC clone: B6Ng01-101N08, 5' end.DH910900|Mus musculus domesticus DNA, BAC clone: B6Ng01-101N08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagttttttatcaa
tacagatctttcaccttcttagttagagtcacgccaagatatttttataa
tatttgtgactattgaagaaggtgtgtttccctaatttcttcttcagcct
gtttatccttgtaaagaggaaggcattgacttgttgaggttttattttat
attcagctactccaccgaagctgtttaatcaggtttagaggttctctggt
agaattttaagggcacttataattatcattt
gaattcactcactttgcataacacaaaaaataatttcccactctctcctc
cctccagcttctggcatccttgactccattccactctgtgattttatgac
tttgactattttagaaacctcacataaagggatcatctatagtatttgtc
attctgtgactggtttatttcagataatataatgtgctctgggttaatcc
aggtgatggcaaatggctatacatcttctcttttgaagactgaataagat
gaagttgcatttatatctcatatgttctttattctatatataattttact
actcaacctatgcctctctgaattatatgccatgttctgcagattcaaga
agcccctaggaaggagcaggaagatccaaatatatgaagaacaattcatg
tttatcacagcatatattagttaatttaattgttgctgggacaagatgcc
tgacaaaaagcaatttgaaggaggaagatcttacactggttcaaagtgta
aggagattatttcataattgggtgtaaggagctatgggagttaagtggaa
aaggcaaggtggcaagatcagaatgccagctgatattataacatttacag
tcagaaagcagagaatgaaccaaacagcatcccaaacagcactgccagca
gggtaccaagtacccaaacacatgaatccttggggaatatttcacactcg
aaccacatgttgcccctctctcttacaggcttctagccatcattcagtga
aaactgaatttcagtgaatcttcagacatttttatgaacactgttttgac
aatgccaacactgtttaaaagcccaaagtctaagtctcttctgaaattca
gggtaacctcttgactggtgactggcagtaattttttaagttatttactt
ccaatacagaatcacactgaatatactctatagaccaaaagaaatcaata
ggggtaatctaggaaagatcagatttagcaaactgacagtgcatgggtag
aagtagatttggcaagactaccatttcttgttcagtatctaagaatatgc
aaaaaattaatggtcctaaaaacacttggttgcctacccttcagcttgaa
gttgaaaggaaattgtatgtctttacaagacgcagacatgacactaatct
cttacgaagaaacatgtcgtgaacttcgaaattccatggaccaatcagta
aactctcaccagttttaaacgatcctaaaaagagctttttagagaccact
actctacatcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_140555198_140555739
seq2: B6Ng01-101N08.b_639_1178 (reverse)

seq1  ATATGATAGTATATATAAGTGACCCTAAAAATTCTACCAGAGAACTCCTA  50
      | |||||| |   |||||||| |||| ||||||||||||||||||  |||
seq2  AAATGATAAT---TATAAGTG-CCCTTAAAATTCTACCAGAGAACCTCTA  46

seq1  AACCTGA-TAAACAGCTTCGGTGAAGTAGCTGGATATAAAATAAA--CTC  97
      ||||||| ||||||||||||||| |||||||| ||||||||||||  |||
seq2  AACCTGATTAAACAGCTTCGGTGGAGTAGCTGAATATAAAATAAAACCTC  96

seq1  AAACAAGTCAATGGCCTTTCTCTATACAAAGAATAAACAGGCTGAGAAAG  147
       ||||||||||| ||||| |||| ||| ||| |||||||||||||  |||
seq2  -AACAAGTCAAT-GCCTTCCTCTTTAC-AAGGATAAACAGGCTGAAGAAG  143

seq1  AAATTAGGGAAACAACACCCTTCTCAATAGTCACAAATAATAT-AAAATA  196
      ||||||||||||| ||||| |  |||||||||||||||| ||| ||||||
seq2  AAATTAGGGAAAC-ACACCTTCTTCAATAGTCACAAATATTATAAAAATA  192

seq1  TCTTGGCGTGACTCTAACTAAGGAGGTGAAAGATCTGTA-TGAT-AAAAA  244
      |||||||||||||||||||||| |||||||||||||||| |||| |||||
seq2  TCTTGGCGTGACTCTAACTAAGAAGGTGAAAGATCTGTATTGATAAAAAA  242

seq1  CTTCAAATCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAATCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAG  292

seq1  ATCTCCCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATC  342

seq1  TTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAAC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAAC  392

seq1  TCAATTCTTCAACGAATTGGAAGGAGCAATTTGCAAATTTGTCTGGAATA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCTTCAACGAATTGGAAGGAGCAATTTGCAAATTTGTCTGGAATA  442

seq1  ACAAAAAACCTAGGATAGCAAAAAGTCTTCTCAAGGATAAAAGAACTTCT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAACCTAGGATAGCAAAAAGTCTTCTCAAGGATAAAAGAACTTCT  492

seq1  GGCGGAATCACCATGCCAGACCTAAAGCTTTACTACAGAGCAATTGTG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGAATCACCATGCCAGACCTAAAGCTTTACTACAGAGCAATTGTG  540