BAC Information

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BAC

Clone NameB6Ng01-102G04
ChromosomeX (Build37)
Map Location 123,301,603 - 123,303,182
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665611, EG626048, LOC100040410, LOC100039903, LOC665679
Downstream gene4932411N23Rik, Gm381, LOC100040472, Gm382, 4921511C20Rik, 4930412D23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102G04.bB6Ng01-102G04.g
ACCDH911293DH911294
length1,065712
definitionDH911293|Mus musculus domesticus DNA, BAC clone: B6Ng01-102G04, 5' end.DH911294|Mus musculus domesticus DNA, BAC clone: B6Ng01-102G04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttccattataaaacatttttctataagttttgtcaattttctca
aaaatacatttgaataacatcttgtaattttttaaaattagatattttcc
tcaattacgtttccaattctatcccaaaagtcccccataccctccctcgc
actcccctatcttacaatgatcacatcagctgtctctcatagtgaacatg
agttttctccattttcgatttgaccaatcgtttttcaatcaatttcctcc
attttaaccacatttttctgtacagttttcacttttatcagaaatagtgt
ataggaacatctcgaaatttatcagaaaatgtttcgctcctttttctcta
atgaaaaagaatatgctttctacgttttcctctttacccggtgatttttc
aatctattatttccattttaacacatttttaaaatatttttttcaatttt
gtcacaaatacattcgaatataatcttttattttatcgtaatatgatgat
ctctagttttgaaaatagtgaacatgaattttctaagttttccatttgaa
cagcctatttttccatcaatttcatccattttaaccccattttttcctgt
agttttcttacatttttatcagaaataatgtattagaacatctcgaattt
catcaaataatatttctctcaattttctcctattagaaaaatatgtttaa
tacgctttcctttctaccagtagcgttttccaaagaattcctccatttta
aaatattttttataattttttttaattatctcacaaatacattctaataa
aatcttctattttaacttgcagcgaagatctctactttctcaaatagtga
acattatttttctacgtcttcaataatacaagcctttttccatccatttt
tttacaacttatccatatttttgtataattttgcattttaccaaatatgc
tgtatagacatctcgattttatcagaaatgtttctatccattttctatag
gaaaacagatttctatgttgctttctacagtagttttttttcatgatctc
atttaacacattttt

gaattctttggaaaacactactggtaaaaagtaaagcgtagaaaacatat
ttttctaataggagaaaattgagagaaacattatttgatgaaattcgaga
agtttaaatatattatttctgataaaaatgtaagaaaacttcagaaaaaa
aatgtggttaaaatggatgaaattgaaggaaaaccaggctgttcaaacgg
aaaacatagaaaattcatgttcattatttgcaaaagcagagatcatcata
ttacgataaaataaaagattatattcgaatgtatttgtgacaaaattgaa
aaaaaattttaaaaatgtgttaaaacggaaataatagattgaaaaaccac
cgggtaaagaggaaaacgtagaaaacatattctttttccattagagaaaa
gggggaagaagaaaaccatttttttcctggaataaaaaattttttcaaaa
aaaattttttttttaaaaaactattttttttggaaaaaaaaagtggaaaa
aaactggtcccaaaaaaaaaaaaggggggttttaaaaatgggggggggaa
aaattttttttttgaaaaaaaacccctttgggggggaaaaatctcaaaaa
gggggggaaaaaaaaccccttttttgtttcccctttttgggggaaaaaaa
aaaaaaggggtccccccccttttttaaaaaaaaagagggggagagggggg
gaaaaaaaaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_123301603_123303182
seq2: B6Ng01-102G04.b_44_1108 (reverse)

seq1  AAAAATGTGTTAAAATGAAGAATTCAATGAAAAAAAACTACTGGTAGAAA  50
                                                        
seq2  --------------------------------------------------  0

seq1  GGAAAACATAGAAAACTTGTTTTTCCTATTAGAAAAATTGGATAGAAAAA  100
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTCTGATAAAATTCGAGATGTTCTTATACAGCATATTTGGTAAAAATG  150
                                                        
seq2  --------------------------------------------------  0

seq1  CGAAAATTATACAAAAATATGGATAAATTGTAAAAAAAATTGATGGAAAA  200
                                                        
seq2  --------------------------------------------------  0

seq1  AGGCTTGTATTATTGAAGACGTAGAAAAATCATGTTCACTATTTGAGAAA  250
                                                        
seq2  --------------------------------------------------  0

seq1  GTAGAGATCTTCGTTCATTGTTAAAATAGAAGATTTTATTAGAATGTATT  300
                                                        
seq2  --------------------------------------------------  0

seq1  TGTGAGAAAATTTAAAAAAATTATAAAAAATGTTTTAAATGGAGGAATTC  350
                                                        
seq2  --------------------------------------------------  0

seq1  TTTGGAAAACACTACTGGTAGAAAGGAAAGCGTAGAAAACATATATTTCT  400
                                                        
seq2  --------------------------------------------------  0

seq1  AATAGGAGAAAATTGAGCGAAATATTATTTGATGAAATTAGAGATGTTCT  450
                                                        
seq2  --------------------------------------------------  0

seq1  AATACATTATTTCTGATAAAAACATAAGAAAACAACAGGAAAAAAATGTG  500
                                               |||||||||
seq2  -----------------------------------------AAAAATGTG  9

seq1  TTAAAATGGAAGAATTCAATGAAAAAAAAAAAACTCCTGGTAGAAAGGCA  550
      || |||||  |||  || |||    |||||||||| || ||||||||   
seq2  TT-AAATG--AGA--TC-ATG----AAAAAAAACTACT-GTAGAAAG--C  46

seq1  AACATAGAAAACCTGTTTTTCCTATTAGAAAAATTGGATAGAAACATTTT  600
      ||||||| ||| ||| |||||||| |||||||  |||||||||||| |||
seq2  AACATAG-AAATCTG-TTTTCCTA-TAGAAAA--TGGATAGAAACA-TTT  90

seq1  CTGATAAAATTCGAGATGTTCTTATACAGCATATTTGGTAAAAATGCAAA  650
      ||||||||| |||||||||   ||||||||||||||||| ||||||| ||
seq2  CTGATAAAA-TCGAGATGT--CTATACAGCATATTTGGT-AAAATGC-AA  135

seq1  AATTATACAAAAATATGGATAAGTTGTAAAAAAATTGATGGAAAAAGGCT  700
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AATTATACAAAAATATGGATAAGTTGTAAAAAAATGGATGGAAAAAGGCT  185

seq1  TGTATTATTGAAGACGTAGAAAAATAATGTTCACTATTTGAGAAAGTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTATTGAAGACGTAGAAAAATAATGTTCACTATTTGAGAAAGTAGA  235

seq1  GATCTTCGTTGCAAGTTAAAATAGAAGATTTTATTAGAATGTATTTGTGA  800
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCGCTGCAAGTTAAAATAGAAGATTTTATTAGAATGTATTTGTGA  285

seq1  GATAATTAAAAAAAATTATAAAAAATGTTTTAAAATGGAGGAATTCTTTG  850
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GATAATTAAAAAAAATTATAAAAAATATTTTAAAATGGAGGAATTCTTTG  335

seq1  GAAAACACTACTGGTAGAAAGGAATGCGTATTAAACATATTTTTCTAATA  900
      |||||| ||||||||||||||||| |||||||||||||||||||||||||
seq2  GAAAACGCTACTGGTAGAAAGGAAAGCGTATTAAACATATTTTTCTAATA  385

seq1  GGAGAAAATTGAGAGAAACATTATTTGATGAAATTCGAGATGTTCTAATA  950
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGAGAAAATTGAGAGAAATATTATTTGATGAAATTCGAGATGTTCTAATA  435

seq1  CATTATTTCTGATAAAAATGTAAGAAAACTACAGGAAAAAATGTGGTTAA  1000
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CATTATTTCTGATAAAAATGTAAGAAAACTACAGGAAAAAATGGGGTTAA  485

seq1  AATGGATGAAATTGATGGAAAAACAGGCTGTTCAAATGGAAAACTTAGAA  1050
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AATGGATGAAATTGATGGAAAAATAGGCTGTTCAAATGGAAAACTTAGAA  535

seq1  AATTCATGTTCACTATTTTCAAAACTAGAGATCATCATATTACGATAAAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATGTTCACTATTTTCAAAACTAGAGATCATCATATTACGATAAAA  585

seq1  TAAAAGATTATATTCGAATGTATTTGTGACAAAATTGAAAAAAATATTTT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGATTATATTCGAATGTATTTGTGACAAAATTGAAAAAAATATTTT  635

seq1  AAAAACGTGTTAAAATGTAAATAATAGATTGAAAAATCACCGGGTAAAGA  1200
      ||||| ||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAAAATGTGTTAAAATGGAAATAATAGATTGAAAAATCACCGGGTAAAGA  685

seq1  GGAAAACGTAGAAAACATATTCTTTTTCATTAGAGAAAAAGGATAGAAAC  1250
      |||||||||||||| ||||||||||||||||||||||||||||  |||||
seq2  GGAAAACGTAGAAAGCATATTCTTTTTCATTAGAGAAAAAGGAGCGAAAC  735

seq1  ATTTTCTGATAAATTTCGAGATGTTCTTATACACTATTTCTGATAAAAGT  1300
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATTTTCTGATAAATTTCGAGATGTTCCTATACACTATTTCTGATAAAAGT  785

seq1  GAAAACTGTACAGAAAAATGTGGTTAAAATGGAGGAAATTGATTGAAAAA  1350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTGTACAGAAAAATGTGGTTAAAATGGAGGAAATTGATTGAAAAA  835

seq1  CGATTGGTCAAATCGAAAATGGAGAAAACTCATGTTCACTATGAGAGACA  1400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTGGTCAAATCGAAAATGGAGAAAACTCATGTTCACTATGAGAGACA  885

seq1  GCTGATGTGATCATTGTAAGATAGGGTAGTGCGAGGGAGGGTATGGGGGA  1450
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GCTGATGTGATCATTGTAAGATAGGGGAGTGCGAGGGAGGGTATGGGGGA  935

seq1  CTTTTGGGATAGAATTGGAAACGTAATTGAGGAAAATATCTAATTTTAAA  1500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGGATAGAATTGGAAACGTAATTGAGGAAAATATCTAATTTTAAA  985

seq1  AAAATACAAAATGTTATTCAAATATATTTTTGAGAAAATTGACAAAATTT  1550
      ||| ||||| ||||||||||||| ||||||||||||||||||||||| ||
seq2  AAATTACAAGATGTTATTCAAATGTATTTTTGAGAAAATTGACAAAACTT  1035

seq1  ATAGAAAAATGTTTTATAATGGAAGAATTC  1580
      ||||||||||||||||||||||||||||||
seq2  ATAGAAAAATGTTTTATAATGGAAGAATTC  1065


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