BAC Information

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BAC

Clone NameB6Ng01-105K01
ChromosomeX (Build37)
Map Location 142,793,658 - 142,794,406
singlet/doubletsinglet
Overlap genenone
Upstream geneAmot, EG434860, LOC100039313, LOC623697, LOC623731, LOC237096, LOC100039558
Downstream geneEG666730, EG245663, Htr2c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105K01.bB6Ng01-105K01.g
ACCDH913597DH913598
length1,223751
definitionDH913597|Mus musculus domesticus DNA, BAC clone: B6Ng01-105K01, 5' end.DH913598|Mus musculus domesticus DNA, BAC clone: B6Ng01-105K01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaagcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaatacgacaacaaaaggagatcaagggg
atacaaattggaaaggaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
gcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaagaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattctta
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctggtggaatcacc
atgcctgacctaaagctttactacagagcaattgtggtaaaaactgcatg
gtactggtatagagacagacaagtagaccaatggaatagaattgaagacc
cagaaatgaacccacacacctatggtcacttgatctttgacaagggagct
aaaaccatccagtggagaaagacagcattttcaacaattggtgctggcac
aactggttgttatcatgtagaagaatgcgaatcgatccatacttatctcc
ttgtactaaggtcaatctaaatggatcaagacttcacataacagaagaca
ctcaactatagagagaagtgggaaagctgaagaatatggcacagggaaaa
tctgaaagaacagcaatggctgtgctgtagaatcggattgacaatggact
aatgaatccaaggtctgcaggcaagcatccgtcgtactacaaagaacctc
aacagaatggaaaggggctcttc
gaattcctagaatttgaatggcaacgttaaaaactatattgaaaaaccac
cgtctttaaattcacacttcaaaagctcaggttaggtaaggccagtgact
caaaatttaggtcagtaataatatctaattctttcactaagtggtttcct
ttcaaatttgtagccgtatatgatatataattaatgatgggtactgactc
ctgaggactttttcccttagaagagaaagatgcttctttggtgtactttt
ctggcaatgtatatttaatcatcttaacttatttagagaaaataaggagt
tttccctctctctttaaatttttccatgtgtccaggtttgctgtacactg
ccattataattaaagtattactatgatttttttttttccttttttttttt
tttttttttccattttttattaggtatttagctcatttacatttccaatg
ctataccaaaagtcccccttacccacccacccccactcccctacccaccc
actccccccctttggccctggcgttcccctgtaccggggcacacaaagtc
tgcgtgtccaatgggcctctctttccagtgatggccgactaggccatctt
ttgatacatatgcagctagagtcaagagttcagggggtactggtcagttc
ataatgttgttccacctatagggttgaagatcccttttacttccttggga
cttttctctagctcctccttggggagtccttgtgatccatccataagctg
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_142793658_142794406
seq2: B6Ng01-105K01.g_69_819 (reverse)

seq1  TCAGCTAATGGATGGATCAC-AGGGCTCCCAATGGAGGAGCTAGAGAAAG  49
      |||||| ||||||||||||| ||| ||||| | |||||||||||||||| 
seq2  TCAGCTTATGGATGGATCACAAGGACTCCCCAAGGAGGAGCTAGAGAAAA  50

seq1  TACCCAAGG-AGCTAAAGGGATCTTCAACCCTATAGGTGGAACAACATTA  98
        ||||||| ||  ||||||||||||||||||||||||||||||||||||
seq2  GTCCCAAGGAAGTAAAAGGGATCTTCAACCCTATAGGTGGAACAACATTA  100

seq1  TGAACTAACCAGTA-CCCCTGAGCTCTTGACTCTAGCTGCATATGTATCA  147
      |||||| ||||||| ||||||| |||||||||||||||||||||||||||
seq2  TGAACTGACCAGTACCCCCTGAACTCTTGACTCTAGCTGCATATGTATCA  150

seq1  AAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACGC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACGC  200

seq1  AGACTTTGTGTGCCCCGGTACAGGGGAACGCCAGGGCCAAAGGGGGGGAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTGTGTGCCCCGGTACAGGGGAACGCCAGGGCCAAAGGGGGGGAG  250

seq1  TGGGTGGGTAGGGGAGTGGGGGTGGGTGGGTAAGGGGGACTTTTGGTATA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGGTAGGGGAGTGGGGGTGGGTGGGTAAGGGGGACTTTTGGTATA  300

seq1  GCATTGGAAATGTAAATGAGCTAAATACCTAATAAAAAATGGAAAAAAAA  347
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GCATTGGAAATGTAAATGAGCTAAATACCTAATAAAAAATGG-AAAAAAA  349

seq1  AAAAAAAAAAAAAGGAAAAAAAAAAATCATAGTAATACTTTAATTATAAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAGGAAAAAAAAAAATCATAGTAATACTTTAATTATAAT  399

seq1  GGCAGTGTACAGCAAACCTGGACACATGGAAAAATTTAAAGAGAGAGGGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGTACAGCAAACCTGGACACATGGAAAAATTTAAAGAGAGAGGGA  449

seq1  AAACTCCTTATTTTCTCTAAATAAGTTAAGATGATTAAATATACATTGCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCTTATTTTCTCTAAATAAGTTAAGATGATTAAATATACATTGCC  499

seq1  AGAAAAGTACACCAAAGAAGCATCTTTCTCTTCTAAGGGAAAAAGTCCTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTACACCAAAGAAGCATCTTTCTCTTCTAAGGGAAAAAGTCCTC  549

seq1  AGGAGTCAGTACCCATCATTAATTATATATCATATACGGCTACAAATTTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTCAGTACCCATCATTAATTATATATCATATACGGCTACAAATTTG  599

seq1  AAAGGAAACCACTTAGTGAAAGAATTAGATATTATTACTGACCTAAATTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAACCACTTAGTGAAAGAATTAGATATTATTACTGACCTAAATTT  649

seq1  TGAGTCACTGGCCTTACCTAACCTGAGCTTTTGAAGTGTGAATTTAAAGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCACTGGCCTTACCTAACCTGAGCTTTTGAAGTGTGAATTTAAAGA  699

seq1  CGGTGGTTTTTCAATATAGTTTTTAACGTTGCCATTCAAATTCTAGGAAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGGTTTTTCAATATAGTTTTTAACGTTGCCATTCAAATTCTAGGAAT  749

seq1  TC  749
      ||
seq2  TC  751