BAC Information

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BAC

Clone NameB6Ng01-107B02
ChromosomeX (Build37)
Map Location 106,815,836 - 106,816,416
singlet/doubletsinglet
Overlap genenone
Upstream geneGm379, Brwd3, 5730416F02Rik, Nsbp1, Sh3bgrl, EG622976, LOC100042831, LOC213474
Downstream geneLOC245573, EG634340, LOC668530
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107B02.bB6Ng01-107B02.g
ACCDH914637DH914638
length1,1361,017
definitionDH914637|Mus musculus domesticus DNA, BAC clone: B6Ng01-107B02, 5' end.DH914638|Mus musculus domesticus DNA, BAC clone: B6Ng01-107B02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggattttg
tcaaatgctttctccgcattatttggagatgatcatgtggtttttgtctt
tgagtttgtttatatagtggattatgttgatggatttttatatattgaac
catccctgcatccctgggatgaatcctacttggccatgatggattattgt
ttttatgtgttcttggattcggttagagagagaacttgattaagtatttt
tgcatcgatattcataagggaaattggtctgaagttctctatcttgttgg
gtctctttgtggttttaggtatcagagtaattgtggcttcaagaatgaat
tgtgtagggtaccttctgcttctattttgtggaatagtttgtgaagaact
ggaattaaatcttctttgaagttctgatagaactctgcactaaacccatc
tggtcctggccttttttgttgttgttgttgttgggagactattaataact
gcttctatttctttaggggatataggactgtttagatcattaatctgatc
tttatttaactttggtacctggtatttgtctagaaacttgtccatttcat
tcaggttatccagttttgttgaatatagccctttgtagaaggatctgatg
gtattttggatttctccaggatctgtcgttatattgcaattttcatttct
gactttgttaattaggatgctttccctgtaccctctagagactctggcta
agggtttatctatcttgtctattttctcaaagaaccagctcctcattttg
ttgattctttgaatagtccttttttcacttggttgatttcgcccccaagt
ttgattatttcctgctctctactcctcttgggtgaatttgcttccttttg
ttctagagcttttaggtgtgtttcaagctgccaatgcgtgctctctctag
ttcttttggaggcactcagagctatgagttttcctcctaggaatgctttc
atgttccacagtttggattgtgtttctcattttcattaaacctcaaatcc
ttgattctcctttattccttcctgatacaggattctttgaagaatgtgtc
cttttccagtgatggttggccataagtaatgtattt
gaattccctgttaaactttaacaggttttaatcctaggaaatgaaataaa
aacttgtatatgatcaaagttatcagacaaaggtattatcattagaaaac
tttagactttctaaagtaattctcaatttatctaaaaataaaaactaatt
aatagttgaataaaaattactgttcatgaggaaagaattaaaatatatct
gcaaaatagtccatatcctaaaaggagatatccagcaaaaacagagaggc
aaatttgataaaattacagctttccttacaatggtaacaaaaagatgttt
caaagagtaccaaatgaaagggggaatgtaacaacagctatcacaataat
tcaaagatatgcaagattttatcatcttattcttcatatggcaataaatt
atagaacttagatgatatttaatatactaataactattaacaaaactgta
agagaaaattttgccattagtatgtaatatctgaaaaaataataaatgct
tagggtcaaattatttcttgttgatgtctgccaaatgcttaatcatcatt
aacaatctttaacatatcagttgcaagagttcttctaaactcattttatg
atgtcagcatcattctaatcccaaataagacaagggcattgcaaaagaca
tcagacaaatatctttgatgaacaggtaaacatataattttactgaagtt
caaagccaatataaactatcatagaacatgagaaaagtggaatatatact
tgggaccaaacttttcaactatgccactcaaaatgagatatgctatatta
acatgttttaaaaacaaaattttaatagtaggagaaaagccatttgataa
aatttaggacatactcagaataaaaaaaatagggattaataaggtcatgg
gtctttgaaaggatatactcctactaatttactagtcagtataattccta
attacattctaaacattactctaatctcacaaataaacatattttcttcc
ttcaaatcaaagaagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_106815836_106816416
seq2: B6Ng01-107B02.g_65_645 (reverse)

seq1  AACTCTTGCAACTGATATGTTAAAGATTGTTAATGATGATTAAGCATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTGCAACTGATATGTTAAAGATTGTTAATGATGATTAAGCATTTG  50

seq1  GCAGACATCAACAAGAAATAATTTGACCCTAAGCATTTATTATTTTTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACATCAACAAGAAATAATTTGACCCTAAGCATTTATTATTTTTTCA  100

seq1  GATATTACATACTAATGGCAAAATTTTCTCTTACAGTTTTGTTAATAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTACATACTAATGGCAAAATTTTCTCTTACAGTTTTGTTAATAGTT  150

seq1  ATTAGTATATTAAATATCATCTAAGTTCTATAATTTATTGCCATATGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTATATTAAATATCATCTAAGTTCTATAATTTATTGCCATATGAAG  200

seq1  AATAAGATGATAAAATCTTGCATATCTTTGAATTATTGTGATAGCTGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGATGATAAAATCTTGCATATCTTTGAATTATTGTGATAGCTGTTG  250

seq1  TTACATTCCCCCTTTCATTTGGTACTCTTTGAAACATCTTTTTGTTACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTCCCCCTTTCATTTGGTACTCTTTGAAACATCTTTTTGTTACCA  300

seq1  TTGTAAGGAAAGCTGTAATTTTATCAAATTTGCCTCTCTGTTTTTGCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAGGAAAGCTGTAATTTTATCAAATTTGCCTCTCTGTTTTTGCTGG  350

seq1  ATATCTCCTTTTAGGATATGGACTATTTTGCAGATATATTTTAATTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCCTTTTAGGATATGGACTATTTTGCAGATATATTTTAATTCTTT  400

seq1  CCTCATGAACAGTAATTTTTATTCAACTATTAATTAGTTTTTATTTTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATGAACAGTAATTTTTATTCAACTATTAATTAGTTTTTATTTTTAG  450

seq1  ATAAATTGAGAATTACTTTAGAAAGTCTAAAGTTTTCTAATGATAATACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTGAGAATTACTTTAGAAAGTCTAAAGTTTTCTAATGATAATACC  500

seq1  TTTGTCTGATAACTTTGATCATATACAAGTTTTTATTTCATTTCCTAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGATAACTTTGATCATATACAAGTTTTTATTTCATTTCCTAGGA  550

seq1  TTAAAACCTGTTAAAGTTTAACAGGGAATTC  581
      |||||||||||||||||||||||||||||||
seq2  TTAAAACCTGTTAAAGTTTAACAGGGAATTC  581