BAC Information

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BAC

Clone NameB6Ng01-107D16
ChromosomeX (Build37)
Map Location 14,311,123 - 14,312,294
singlet/doubletsinglet
Overlap genenone
Upstream geneCask, LOC385327, EG385328
Downstream geneLOC668991, 4930403L05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107D16.bB6Ng01-107D16.g
ACCDH914749DH914750
length1,2641,138
definitionDH914749|Mus musculus domesticus DNA, BAC clone: B6Ng01-107D16, 5' end.DH914750|Mus musculus domesticus DNA, BAC clone: B6Ng01-107D16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcgacagaaataccgaatggctgagaagcacctgaaaaatgaac
atccttaatcatcagggaaatgcaaatcaaaacaaccctgagattttcca
cctcacaccagtcagaatggctaagatcaaaaattcagatgacagcagat
gctggtgaggatgtgaagaggaacactcctccattgctggtgggattgta
agctggtagaaccattctgtaaaacagtttggtggttcctcagataattg
gacatagttctactggaagatccagaaataccattcctgggcatataccc
agaacatcagaacatggtccaacatgtaataaggatacatgctctactac
gttcatatcagccttatttataaaatccagaagctggaaagaacccagat
gtctctcaacataggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaacaatgaatttatgaaattcttaggaaa
atggatggatctggaggatatcatccttagtgaggtaacccaatcagaaa
agaacacacatgatatgcactcactgataagtggatattagcccagaagc
tcagaatcctcttagaagggggaacaaaatacccatgggagagttacaga
gacaaagttcagagcagagactgaaggaacaatcatccagtgactgcccc
acttggggacccatcccataaacaaccaccaaacccagacactatggcag
atgccaataagagtctgctgattggagcttggtatagctgtctcctgaaa
gcctctgcctgtgcctggcaaatacagaagtgaatccacaaaatcatcca
ttggacttaccacaaggttcccaatgaaggagctagagaaagtacccaag
aacgtgaaggggtctgaagccccataggaggaacatcaatatgaactagc
cagtacctccagtgctccatagaataaaaccacaaatcaaagaaaacaca
tggtgcaatttgtagttatagctgtatatgtagcagagatgcctagtctg
tcatcactgaggagagctgcttcagatcaaacatagcattctcagtcagt
cttcagtacatgtttgccttcagctattgcactttctgcaagatgataat
ggattaccttggacttgtaagcagttccagtaatgttacctaccagcttg
acttagccatgggttctctctatgtatggatctatagacaaggggttatg
gttaggctttagga
gaattccaaagataagatgatgacaattcatgatatagccttccccaagc
taactttctagattagtcccaagtgcaataagactactcagacttagaaa
tggctattgtgttacacctatttaaaaggatgttctgtcttctatttagt
acacacatcactgcttctttaattttaatatagggcaaaaatacatagaa
tattgcacattccatgtaatattagcttctcctgttttttctttacccat
attacttttctaccttgttgttgtctttcttcatttattatgctgtgggc
attaagacttttcttctatagtaaaggagacatccctgcttggtctaaac
atcatcattaccacctgttataatctttcactgtaagtatcaggacattt
ttttttttgaaagcacacattattcagtgaatgattttcttagctatggt
acataataaaaaagaggatcaatgtatattcagcctttgctgataattta
gcgtatcaaaataaatagggtattatgtcatgattcatgtccctaatatg
ctggcattatggttgtggtaactgtggaggaagagttgctgttggtcaca
aaggaccagcttgagacatacaaaaattattctgagtagagacaaaacag
tgtgtgttagaagccacccagctggaaaggggattgtatgaaatacaagt
gacctaaatattctataatctgttcctttcttcacaggaaatttattttg
tccagtctttattagagagctagttccttcctatgtcactctttaatggt
aatttttcttaggcatctaagtttgtgaaagctgcatttccacaaagaat
actgagatttctatagaaaaagacatagctggaattagcttaagaattag
tatgaccctggagcccattatgtggaggcaatttctcagaaatcagatct
agtaggactgcctctctcctctatgtttgatacttgaacatgacagtcag
ttaaaatgtctttttctttagacacagtcgcagatgggtgagaatctgtg
atctcttctggtctagttctatgtgtatgagtgcagtgtaaccagaggta
tattcccttgcttgacatgatatggcaagttttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_14311123_14312294
seq2: B6Ng01-107D16.g_67_1204

seq1  GAATTCCAAAGATAAGATGATGACAATTCATGATATAGCCTTCCCCAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGATAAGATGATGACAATTCATGATATAGCCTTCCCCAAGC  50

seq1  TAACTTTCTAGATTAGTCCCAAGTGCAATAAGACTACTCAGACTTAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTCTAGATTAGTCCCAAGTGCAATAAGACTACTCAGACTTAGAAA  100

seq1  TGGCTATTGTGTTACACCTATTTAAAAGGATGTTCTGTCTTCTATTTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATTGTGTTACACCTATTTAAAAGGATGTTCTGTCTTCTATTTAGT  150

seq1  ACACACATCACTGCTTCTTTAATTTTAATATAGGGCAAAAATACATAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATCACTGCTTCTTTAATTTTAATATAGGGCAAAAATACATAGAA  200

seq1  TATTGCACATTCCATGTAATATTAGCTTCTCCTGTTTTTTCTTTACCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCACATTCCATGTAATATTAGCTTCTCCTGTTTTTTCTTTACCCAT  250

seq1  ATTACTTTTCTACCTTGTTGTTGTCTTTCTTCATTTATTATGCTGTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTTTCTACCTTGTTGTTGTCTTTCTTCATTTATTATGCTGTGGGC  300

seq1  ATTAAGACTTTTCTTCTATAGTAAAGGAGACATCCCTGCTTGGTCTAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGACTTTTCTTCTATAGTAAAGGAGACATCCCTGCTTGGTCTAAAC  350

seq1  ATCATCATTACCACCTGTTATAATCTTTCACTGTAAGTATCAGGACATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCATTACCACCTGTTATAATCTTTCACTGTAAGTATCAGGACATTT  400

seq1  TTTTTTTTGAAAGCACACATTATTCAGTGAATGATTTTCTTAGCTATGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTGAAAGCACACATTATTCAGTGAATGATTTTCTTAGCTATGGT  450

seq1  ACATAATAAAAAAGAGGATCAATGTATATTCAGCCTTTGCTGATAATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATAAAAAAGAGGATCAATGTATATTCAGCCTTTGCTGATAATTTA  500

seq1  GCGTATCAAAATAAATAGGGTATTATGTCATGATTCATGTCCCTAATATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTATCAAAATAAATAGGGTATTATGTCATGATTCATGTCCCTAATATG  550

seq1  CTGGCATTATGGTTGTGGTAACTGTGGAGGAAGAGTTGCTGTTGGTCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATTATGGTTGTGGTAACTGTGGAGGAAGAGTTGCTGTTGGTCACA  600

seq1  AAGGACCAGCTTGAGACATACAAAAATTATTCTGAGTAGAGACAAAACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACCAGCTTGAGACATACAAAAATTATTCTGAGTAGAGACAAAACAG  650

seq1  TGTGTGTTAGAAGCCACCCAGCTGGAAAGGGGATTGTATGAAATACAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTAGAAGCCACCCAGCTGGAAAGGGGATTGTATGAAATACAAGT  700

seq1  GACCTAAATATTCTATAATCTGTTCCTTTCTTCACAGGAAATTTATTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAAATATTCTATAATCTGTTCCTTTCTTCACAGGAAATTTATTTTG  750

seq1  TCCAGTCTTTATTAGAGAGCTAGTTCCTTCCTATGTCACTCTTTAATGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCTTTATTAGAGAGCTAGTTCCTTCCTATGTCACTCTTTAATGGT  800

seq1  AATTTTTCTTAGGCATCTAAGTTTGTGAAAGCTGCATTTCCACAAAGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTCTTAGGCATCTAAGTTTGTGAAAGCTGCATTTCCACAAAGAAT  850

seq1  ACTGAGATTTCTATAGAAAAAGACATAGCTGGAATTAGCTTAAGAATTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGATTTCTATAGAAAAAGACATAGCTGGAATTAGCTTAAGAATTAG  900

seq1  TATGAACCCTGGAGCCCATTATGTGGAGGCAATTTCTCAGAAATCAGAAT  950
      |||| |||||||||||||||||||||||||||||||||||||||||| ||
seq2  TATG-ACCCTGGAGCCCATTATGTGGAGGCAATTTCTCAGAAATCAG-AT  948

seq1  CTAGTAGGGACTGCCTCTCTCCCTCTATGTTTTGAATACTTGAACATGAC  1000
      |||||| ||||||||||||| |||||||||||   |||||||||||||||
seq2  CTAGTA-GGACTGCCTCTCT-CCTCTATGTTT--GATACTTGAACATGAC  994

seq1  AAGTCCAGTTTAAAATGTCTTTTTCCTTTTAGGACACAGTCGCAGGATGG  1050
       ||| ||| ||||||||||||||||  |||| |||||||||||| |||||
seq2  -AGT-CAG-TTAAAATGTCTTTTTC--TTTA-GACACAGTCGCA-GATGG  1037

seq1  GTGAGAATCTGGTTGATCTCTTCTGTCATAGGTCTCATGTGTATGAGTGC  1100
      |||||||||||  ||||||||||||   ||| ||| ||||||||||||||
seq2  GTGAGAATCTG--TGATCTCTTCTGGTCTAGTTCT-ATGTGTATGAGTGC  1084

seq1  AAGTGTAAACCAGAGGGTTAATATTCCCCTTGCTTTATAGACCACTGAAT  1150
       ||||| |||||||||    ||||| |||||||||    |||      ||
seq2  -AGTGT-AACCAGAGG---TATATT-CCCTTGCTT----GAC------AT  1118

seq1  TATTGGGCAATAGTTTTTTTTT  1172
       ||  ||||  |||||||||||
seq2  GATATGGCA--AGTTTTTTTTT  1138