BAC Information

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BAC

Clone NameB6Ng01-108I14
ChromosomeX (Build37)X (Build37)
Map Location 123,294,941 - 123,304,890123,303,826 - 123,304,448
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG665611, EG626048, LOC100040410, LOC100039903, LOC665679
Downstream gene4932411N23Rik, Gm381, LOC100040472, Gm382, 4921511C20Rik, 4930412D23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108I14.bB6Ng01-108I14.g
ACCDH915696DH915697
length1,104623
definitionDH915696|Mus musculus domesticus DNA, BAC clone: B6Ng01-108I14, 5' end.DH915697|Mus musculus domesticus DNA, BAC clone: B6Ng01-108I14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(123,294,941 - 123,304,890)(123,303,826 - 123,304,448)
sequence
gaattcttccattttaacacatttttgtattaatttggtcaactttctca
taataaattcaattcaatcatgaatgtttatattaaaatattgatctctt
ctttgcaaaacttgtgaacatgagttttccctgttttccatttgaccagg
tttttttttctatcaaattcctccatttttccacgtttattgtaattttt
tactttttatccaaatgctgtttaagaacatttcgaattttatcagaaaa
tgattctctccattttctctattaggaaaaatatgttttctttgttttcc
tttctaactgaaggtttttccatcgaattcttccattataaaacattttt
ctataaattttgtcaattttctcaaaaatatatttgaataacatcttgta
ttttttttaaattaggtattttcctcaattacgtttccaattctatccca
aaagtcccccataccctccctcgcactcccctatcttacaatgatgacct
cagctgtctctcatagtgaacatgagttttctccattttcgatttgacca
atcgattttcaatcaatttcctccattttaaccacatttttctgtacagt
tttcacttttatcagaaatagtgtataagaacatctcgaaatttatcaga
aaatgtttctctcctttttctctaatgaaaaagaatatgttttctacgtt
ttcctctttacctggtgatttttcaatctattatttccattttaacacat
ttttaaaatatttttttcaattttgtcacaatacatttcgaatataatct
tttattttatcgtaatatgatgatctctgcttttgcaaatagtgaacatg
aattttctaagtttttcatttgtacagcctgtttttcaatcatttcatca
attttaaccacattttttccgatagtttttcttacatttatttcagaata
tgtattaggacatcctgaatttcatcgaataatgtttctctcatttctct
attagataaatatgttatatgctttcttctacagtagtgttcaagaatct
cattaaacattttttataatttttcatttctaaatcattaataaatcttc
tatt
gaattctttggaaaacactactggtagataggaaagcgtattaaacatat
ttttctaataggagaaaattgagagaaatattatttgatgaaattcgaga
tgttctaatacattatttctgataaaaatgtaagaaaactacaggaaaaa
atgtggttaaaatggatgaaattgatggaaaaacaggctgttcaaatgga
aaaattagaaaattcatgttcactattttcaaaactatagatcatcatat
tacgataaaataaaagattatattcgaatgtatttgtgacaaaattgaaa
aaaatattttaaaaatgtgttaaaatggaaataatagattgaaaaatcac
caggtaaagaggaaaacgtagaaaacatattctttttcattagagaaaaa
ggagaaaaacattttctgataaattttgagatgttcttatacactatttc
tgataaaagtgaaaactgtacagaaaaatgtggttaaaatggaggaaatt
gattgaaaatcgattggtcaaatcgaaaatggagaaaactcatgttcact
atgagagacagctgaggtcatcattgtaagataggggagtgcgagggagg
gtatgggggactttttgggatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_123294941_123304890
seq2: B6Ng01-108I14.b_47_1150 (reverse)

seq1  AATAGAAGATTTTATTAGAATGTATTTGGGAGAAAATTGAAAAAAATTAT  50
                                                        
seq2  --------------------------------------------------  0

seq1  TAAAAAAATGTTTTAAAATGGAGGAATTCTTTGGAAAACACTACTGGTAA  100
                                                        
seq2  --------------------------------------------------  0

seq1  AAAGTAAAGCGTAGAAAACATATTTTTCTAATAGGAGAAAATTGAGAGAA  150
                                                        
seq2  --------------------------------------------------  0

seq1  ACATTATTTGATGAAATTCGAGAAGTTTAAATATATTATTTCTGATAAAA  200
                                                        
seq2  --------------------------------------------------  0

seq1  ATGTAAGAAAACTTCAGAAAAAAAATGTGGTTAAAATGGATGAAATTGAA  250
                                                        
seq2  --------------------------------------------------  0

seq1  GGAAAACCAGGCTGTTCAAACGGAAAACATAGAAAATTCATGTTCATTAT  300
                                                        
seq2  --------------------------------------------------  0

seq1  TTGCAAAAGCAGAGATCATCATATTACGATAAAATAAAAGATTATATTCG  350
                                                        
seq2  --------------------------------------------------  0

seq1  AATGTATTTGTGACAAAATTGAAAAAAAATTTTAAAAATGTGTTAAAACG  400
                                                        
seq2  --------------------------------------------------  0

seq1  GAAATAATAGATTGAAAAACCACCGGGTAAAGAGGAAAACGTAGAAAACA  450
                                                        
seq2  --------------------------------------------------  0

seq1  TATTCTTTTTCCATTAGAGAAAAGGGAGAGAAACATTTTCTGATAAATTT  500
                                                        
seq2  --------------------------------------------------  0

seq1  CAAGAAGTTCTTATAAACTATTTCTGATAAAAGTGAAAACTGTACAGAAA  550
                                                        
seq2  --------------------------------------------------  0

seq1  AATGTGGTTAAGATGGAGGAAATTGATTGAAAAAGCGATTGGTGAAATCG  600
                                                        
seq2  --------------------------------------------------  0

seq1  AAAATGGAGAAAACTCTTGTTCACTTTGTGAGAAAGTAGAGGTCACCATT  650
                                                        
seq2  --------------------------------------------------  0

seq1  GTAAGATAGGGGAGTGGGAGGAAGGGTATGGGGGACTTTTGGGATAGAAT  700
                                                        
seq2  --------------------------------------------------  0

seq1  TGGAAACGTAATTGAGGAAAATACCTAATTTAAAAAATACAAGATGTTAT  750
                                                        
seq2  --------------------------------------------------  0

seq1  TCAAATGTATTTTTGAGAAAAATGACAAAATTCATAGAAAAAAGTTATAT  800
                                                        
seq2  --------------------------------------------------  0

seq1  AATGGAAGAATTCGATGGAAAAACCTTCACTTAGAAAGGAAAACAAAGAA  850
                                                        
seq2  --------------------------------------------------  0

seq1  AACATATTTTTCTTATTAGAGAAAATGGAGAGAATAATTTTCTGATAAAA  900
                                                        
seq2  --------------------------------------------------  0

seq1  TTCGAGATGTTCTTAAACAGCATTTGGATAAAAAGAAAAAAATTACAATA  950
                                                        
seq2  --------------------------------------------------  0

seq1  AACGTGGAAAAATGGAGGAATTTGATAGAAAAAAAACATGGTCAAATGGA  1000
                                                        
seq2  --------------------------------------------------  0

seq1  AAACAGAGAAAACTCATGTTCACAAGTTTGCAAAGAAGAGATCAATATTT  1050
                                                        
seq2  --------------------------------------------------  0

seq1  TAATATAAAAATACAAGATTGAATTCTAATTTATTTATGAAAAAGTTGAC  1100
                                                        
seq2  --------------------------------------------------  0

seq1  AAAATTAATACAAAAACGTGTTAAAATGGAAGAATACAATGAAAAAAACT  1150
                                                        
seq2  --------------------------------------------------  0

seq1  ACTGGTAGAAAGGCAAACATAGAAAACTTGTTTTTCCTATTAGAAAAATT  1200
                                                        
seq2  --------------------------------------------------  0

seq1  GGATAGAAACATTTTCTGATAAAATTCAAGATGTTCTTTTAGAGCATATT  1250
                                                        
seq2  --------------------------------------------------  0

seq1  TGGTAAAAATGTAAAAATTATACAAAAATATGGATAAATTGTAAAAAAAT  1300
                                                        
seq2  --------------------------------------------------  0

seq1  TGATGGAAAGAAAGGCTTGTATTATTGAACACGTAGAAAAATCACGTTCA  1350
                                                        
seq2  --------------------------------------------------  0

seq1  CTATTTGAGAAAGTAGAGATCTTCATTGCAAGTTAAAATAGAAGATTTTA  1400
                                                        
seq2  --------------------------------------------------  0

seq1  TTAGAAAGTATTTCTGACAAAATTGAAAAAAATTATAAAAAATGTTTTAA  1450
                                                        
seq2  --------------------------------------------------  0

seq1  AATGGAGGAATTCTTTGGAAAACACTACTGTTAGAAAGGAAAGCATAGAA  1500
                                                        
seq2  --------------------------------------------------  0

seq1  AACATATTTTTCTAAAAGGAGAAAATTGAGAGAAACTTTATTTGATGAAA  1550
                                                        
seq2  --------------------------------------------------  0

seq1  TTCGAGATGTTCTAATATATTATTTATGATAAAAATGTAAGAAAACTACA  1600
                                                        
seq2  --------------------------------------------------  0

seq1  GGAAAAATATGTGGTTAAAATGGATGACATTGATGGAAAACCAGACTGTT  1650
                                                        
seq2  --------------------------------------------------  0

seq1  CAAATGGAAAACTTAGAAAATTCATGTTCACTATTTGCAAAAGCAGAGAT  1700
                                                        
seq2  --------------------------------------------------  0

seq1  CATCATATTACCATAAAATAAAAGGTTATATTCGAATGTATTTGTGACAA  1750
                                                        
seq2  --------------------------------------------------  0

seq1  AATTGAAAAAAATATTTTAAAAATGTGTTAACATGGAAATAATAGATTGA  1800
                                                        
seq2  --------------------------------------------------  0

seq1  AAAACGTCGAGTAAAGAGGAAAACGTAGAAAACATATTCCTTTTCATTAG  1850
                                                        
seq2  --------------------------------------------------  0

seq1  AGAAAAAGGAGAGAAACATTTTTTGATAAATTTCGAGATGTTTTTATAAA  1900
                                                        
seq2  --------------------------------------------------  0

seq1  CTATTTCTGATAAAAGTGAAAACTGTACAGAAAAATGTGATTAAAATGGA  1950
                                                        
seq2  --------------------------------------------------  0

seq1  GGAAATTTATTGAAAAAGCGAAAGGTCAAATCAAAAATGGAGAAAACTCA  2000
                                                        
seq2  --------------------------------------------------  0

seq1  TGTTCAGTTTGTGAGAATGTAGAGGTCATCATTGTAAGATAGGGGAGTGG  2050
                                                        
seq2  --------------------------------------------------  0

seq1  GAGGAAGGGTATGGGGGACTTTTGGGATAGAATTGGAAAAGTAATTGAGT  2100
                                                        
seq2  --------------------------------------------------  0

seq1  AAAATAGATAATTTAAAAAAATACAAGATGATATTCAAATATATTTTTGA  2150
                                                        
seq2  --------------------------------------------------  0

seq1  GAAAAATGACAAAATTCATACAAAAAAGTTTTATAATGGAAGAATTTGAT  2200
                                                        
seq2  --------------------------------------------------  0

seq1  GGAAAAACCTTCAGTTAGAAAGGAAAACAAAGAAAACATATTTTTCCTAT  2250
                                                        
seq2  --------------------------------------------------  0

seq1  TAGAGAAAATGGAGAGAATCATTTTCTGATAAAATTTGAGATGTTCTTAA  2300
                                                        
seq2  --------------------------------------------------  0

seq1  ACAGCATTTGGATTAAAAGAAAAAAATTAGAATAAACGAGGAAAAATGGT  2350
                                                        
seq2  --------------------------------------------------  0

seq1  GGAATTTGATAGAAAAAAAAAACCTGGTCAAATGGAAAACAGAGAAAACT  2400
                                                        
seq2  --------------------------------------------------  0

seq1  CATGTTCACAAGTTTGCAAAGAAGAGATCCATATTTTAATATAAACATAC  2450
                                                        
seq2  --------------------------------------------------  0

seq1  AATATTGAATTCTAATTTATTTATGAGAAAGTTGAAAAAATTAATTCAAA  2500
                                                        
seq2  --------------------------------------------------  0

seq1  AATGTGTTAAAATGGAAGGATTCAATGACTAAAAACTACTGGTAGAAAGG  2550
                                                        
seq2  --------------------------------------------------  0

seq1  CAAACATAGAAAACTTGTTTTTCCTATTAGAAAAATTGCTTAGAAACATT  2600
                                                        
seq2  --------------------------------------------------  0

seq1  TTCTGATAAAAATCGAGATGTTCTTATACAGCATATTTGGTAAAAATGCA  2650
                                                        
seq2  --------------------------------------------------  0

seq1  AAAATTGTACAAAAATATGGATAATTTTTTTAAAAAAATTGATGTAAAAA  2700
                                                        
seq2  --------------------------------------------------  0

seq1  GGCTTGTATTATTTAAGAAGTAGAAAAATCATGTTCACTATTTGAGAAAG  2750
                                                        
seq2  --------------------------------------------------  0

seq1  TAGAGATCTTCATTCCAAGTTAAAATAGACGATTTTCTTAGAATGTATTT  2800
                                                        
seq2  --------------------------------------------------  0

seq1  GTGAGAAAATTGAAAAAAATTATTAAAAAAATGTTTTAAAATGGAGGAAT  2850
                                                        
seq2  --------------------------------------------------  0

seq1  TCTTTGGAAAACACTACTGGTAGAAAGGAAAGCGTAGAAAACATATATTT  2900
                                                        
seq2  --------------------------------------------------  0

seq1  CTAATAGGAGAAAATTGAGAGAAATATTATTTGATGAAATTCGAGATCTT  2950
                                                        
seq2  --------------------------------------------------  0

seq1  CTAGTACATTATTTCTGATAAAAACGTAAGAAAACTACAGGAAAAAATGT  3000
                                                        
seq2  --------------------------------------------------  0

seq1  GGTTAAAATAGATGAAATTGATGCGAAAACAGGCTGTTCAAATGGAAAAC  3050
                                                        
seq2  --------------------------------------------------  0

seq1  TTAGAAAATTCATGTTCACTATTTGCAAAAGCAGAGATCATCATATTACG  3100
                                                        
seq2  --------------------------------------------------  0

seq1  ATAAAATAAAAGATTATATTCGAAAGCATTTGTGACAAAATTGAAAAAAT  3150
                                                        
seq2  --------------------------------------------------  0

seq1  ATTTTAAAAATGTATTAAAATGGAAATAATAGATTGAAAAAACACCGGGT  3200
                                                        
seq2  --------------------------------------------------  0

seq1  AAAGAGGAAAACGTAGAAAACATAATCTTTTCCATTAGAGAAAAAGGAGA  3250
                                                        
seq2  --------------------------------------------------  0

seq1  GAAACATTTTCTGATAAATTTCGAGATGTTATTATACACTATTTCTGATA  3300
                                                        
seq2  --------------------------------------------------  0

seq1  AAAGTGAAAACTGTACAGAAAAATGTGGTTAAAATGGAGGAAATTGATTG  3350
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAAGCGAAAGGTCAAATCGAAAATGGAGAAAACTCATTTTCATTATGT  3400
                                                        
seq2  --------------------------------------------------  0

seq1  GAGAAAGTAGAGGTCATCACTGTAAGATAGGGGAGTGGGGGGGAGGGTAT  3450
                                                        
seq2  --------------------------------------------------  0

seq1  GGGGGACTTTTGGGATAGAATTGGAAACTTAATTGAGGAAAATATCAATT  3500
                                                        
seq2  --------------------------------------------------  0

seq1  TAAAAAAATTACAAGATGTTATTCAATTGTATTTTTGAGAAAATTGACAA  3550
                                                        
seq2  --------------------------------------------------  0

seq1  AATTTATAGAAAAATGTTTTATAATGGAAGAATTCGATGGAAAAACCTTA  3600
                                                        
seq2  --------------------------------------------------  0

seq1  AGTTAGAAAGTAAAACAGAGAAATACATATGTTTCCTATTAGAAAAAATG  3650
                                                        
seq2  --------------------------------------------------  0

seq1  GAGAGAATCATTTTCTGATAAATTTCAAGATGTTCTTAAACAGCATTTGG  3700
                                                        
seq2  --------------------------------------------------  0

seq1  ATAAAAAGTAAAAAATTACAAAAAACGTGGAAAAATGGAGAAACTTGATA  3750
                                                        
seq2  --------------------------------------------------  0

seq1  GAAAAAAGAAACCTGGACAAATGGAAAACAGAGAAAACTCATGATCACTA  3800
                                                        
seq2  --------------------------------------------------  0

seq1  GTTTGCAAAGAAGAGATCAATATTTTAATATAAACATACAAGATTGAATT  3850
                                                        
seq2  --------------------------------------------------  0

seq1  CTAATTTATTCTTGAGAAAGTTGACCAAATTAATACAAAAAATGTGTTAA  3900
                                                        
seq2  --------------------------------------------------  0

seq1  AATGGAAGAATTCAATGAAAAAAAAAAAAAACTACTGGTAGAAAGGCAAA  3950
                                                        
seq2  --------------------------------------------------  0

seq1  CATAGAAAACTTGTTTTTCCTATTAGAAAAATTGGATAGAAAAATTTTCT  4000
                                                        
seq2  --------------------------------------------------  0

seq1  GATAAGATCGAGATGTTCTTATACAGCATATTTGGTAAAAATGCGAAAAT  4050
                                                        
seq2  --------------------------------------------------  0

seq1  TATACAAAAATATGGATAAATTGTAAAAAATTGATGGAAAAAGGCTTGTA  4100
                                                        
seq2  --------------------------------------------------  0

seq1  TTATTGAAGACGTAGAAAAATCATGTTCACTATTTGAGAAAGTAGAGATC  4150
                                                        
seq2  --------------------------------------------------  0

seq1  TTCGTTCAGTGTTAAAATAGAAGATTTTATTAGAATGTATTTGTGAGAAA  4200
                                                        
seq2  --------------------------------------------------  0

seq1  ATTGAAAAAATTATAAAAAAATGTTTTAAAATGGAGGAATTCTTTAGAAA  4250
                                                        
seq2  --------------------------------------------------  0

seq1  ACACTACTGGTAGAAAGGAAAGCGTAGAAAACATATTATTCTAATAGGAC  4300
                                                        
seq2  --------------------------------------------------  0

seq1  AAAATTGAGAGTAACATTATTTGATGAAATTCGAGATGTTCTAATACATT  4350
                                                        
seq2  --------------------------------------------------  0

seq1  ATTTCTGATAAAAATGTAAGAAACCTACAAGAAAAAATGTGGTTAAAATG  4400
                                                        
seq2  --------------------------------------------------  0

seq1  GATGACATTGATTAAAAAACAGGCTGTTCAAATGGAAAACTTAGAAAATT  4450
                                                        
seq2  --------------------------------------------------  0

seq1  CATGTTCACTATTTGCAAAAGCAGAGATCATCATTTTACGATAAAATAAA  4500
                                                        
seq2  --------------------------------------------------  0

seq1  AGATTATATTGGAATGCATTTGTGACAAAATTGAAAAAAATATTTTAAAA  4550
                                                        
seq2  --------------------------------------------------  0

seq1  ATGTGTTAAAATGGAAATAATAGATTGAAAAAACACCGGGTATAGAGGAA  4600
                                                        
seq2  --------------------------------------------------  0

seq1  AACGTAGAAAACATATTCTTTTTCATTAGAGAAAAAGGAGAGAAACATTT  4650
                                                        
seq2  --------------------------------------------------  0

seq1  TTGATAAATTTCGAGATGTTCTTATACACTATTTCTGATAAAAGTGAAAA  4700
                                                        
seq2  --------------------------------------------------  0

seq1  CTGTACAAAAAATGTGGTTAAATTGGAGGAAATTGATTGAAAAACCGATT  4750
                                                        
seq2  --------------------------------------------------  0

seq1  GGTAAAATCAAAAATGGAGAAAACTCATGTTCAATATGTGAGAAAATTGA  4800
                                                        
seq2  --------------------------------------------------  0

seq1  GGTCATCATTGTAAGATAGCGGAGTGGGGAGGAGGGTATGGGGGAATTTT  4850
                                                        
seq2  --------------------------------------------------  0

seq1  GGGATAGAATTTTAAAAGTAATTGCGGAAAATACCAATTTTAAAAAATTA  4900
                                                        
seq2  --------------------------------------------------  0

seq1  CAAGATGTTATTCAAATGTATTTTTGAGAAAATTGACAAAACTTATAGAA  4950
                                                        
seq2  --------------------------------------------------  0

seq1  AAATTTTTTATAATGGAAGAATTCGATGGAAAAACCTTCAGTTAGAAAGG  5000
                                                        
seq2  --------------------------------------------------  0

seq1  AAAGCAAAGAAAACATATTTTTCCTATTAGAGAAAATGGAGAGAATCATT  5050
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTGATAAAATTTGAGATGTTCTTAAACAGCATTTAGATAAAAAGAAAA  5100
                                                        
seq2  --------------------------------------------------  0

seq1  ATATTAGCATAAACATGGGAAAATGGAGGAATTTGATAGAAAAAAAAACT  5150
                                                        
seq2  --------------------------------------------------  0

seq1  GGTCAAATGGAAAACAGGGAAAACTCATGTTCACAAGTTTGCAAAGAAGA  5200
                                                        
seq2  --------------------------------------------------  0

seq1  GATCAATATTTTAATATAAACATACAAGATTGAATTCTAATTTATTTATG  5250
                                                        
seq2  --------------------------------------------------  0

seq1  AGAAAGTTGACCAAATTAATACAACAATGTGTTAAAATGGAAGAATTCAA  5300
                                                        
seq2  --------------------------------------------------  0

seq1  TGAAAAAAAAAAACTACTGGTAGAAAGGTAAACAGAGAAAACTTGTTTTT  5350
                                                        
seq2  --------------------------------------------------  0

seq1  CCTATTAGAAAAATTGGGAAAAAACATTTTCTGATAAAATTCGAGATGTT  5400
                                                        
seq2  --------------------------------------------------  0

seq1  CTCATACAGCATATTTGGTAAAAATGCAAAAATTATACAAAAATACGGAT  5450
                                                        
seq2  --------------------------------------------------  0

seq1  AAATTGTAAAAAAAATTTGATGGAAAAAGGCTTGTATTATTGAAGACGTA  5500
                                                        
seq2  --------------------------------------------------  0

seq1  GAAAAATCATGTTCACTATTTGAGAACGTAGAGAGTTTCGTTGCAAGTTA  5550
                                                        
seq2  --------------------------------------------------  0

seq1  AAATAGATGATTTTATTAGAATGTATTTGTGAGAAAATTGAAAAAAATTA  5600
                                                        
seq2  --------------------------------------------------  0

seq1  TAAAAAATGTTTTAAACTGGAGGAATTGTTTGGAAAACACTACTGGTAGA  5650
                                                        
seq2  --------------------------------------------------  0

seq1  AAGGAAAGCGTAGAAAACATATTATTCTAATAGGACAAAATTGAGAGAAA  5700
                                                        
seq2  --------------------------------------------------  0

seq1  CATTATTTGATGCAATTCGAGATGTTCTAATACACTATTTCTGATAAAAA  5750
                                                        
seq2  --------------------------------------------------  0

seq1  TGTAAGAAAACTACAGGAAAAAAAGTGGTAAAAATGGATGAAATTGATGG  5800
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAACAGGCTGTTCAAATGGAAAACTTAGAAAATTCATGTTCACTATTT  5850
                                                        
seq2  --------------------------------------------------  0

seq1  GCAAAAGCAGAGATCATCATATTACGATAAAATAAAAGATTATATTCGAA  5900
                                                        
seq2  --------------------------------------------------  0

seq1  TGTATTTGTGACAAAATTGAAAAAATATTTTAAAAATGTGTTAAAATGGA  5950
                                                        
seq2  --------------------------------------------------  0

seq1  AATAATAGATTGAAAAAACACCGGGTAAAGAGGAAAACGTAGAAAACATA  6000
                                                        
seq2  --------------------------------------------------  0

seq1  ATCTTTTTCATTAGAGAAAAAGGAGAGAAACATTTTTGATGAATTTCGAG  6050
                                                        
seq2  --------------------------------------------------  0

seq1  ATGTTCTTATACACTATGTCTGATAAAAGTGAAAACTGTACAGAAAAATG  6100
                                                        
seq2  --------------------------------------------------  0

seq1  TGGTTAAAATGGAGGAAATTGATTGAAAAAGCGAAAGGTCAAATCAAAAA  6150
                                                        
seq2  --------------------------------------------------  0

seq1  TGGAGAAAACTCATATTCACTATGTGAGAAAGTAGAGGTCATCACTGTAA  6200
                                                        
seq2  --------------------------------------------------  0

seq1  GATAGGGGAGTGGGGGGGAGGGTATGGGGGACTTTTGGCATAGAATTGGA  6250
                                                        
seq2  --------------------------------------------------  0

seq1  AACGTAATTGAGGAAAATATCAATTAAAAAAATTACAAGATGTTATTCAA  6300
                                                        
seq2  --------------------------------------------------  0

seq1  ATGTATTTTTGAGAAAATTGACAAAACTTATAGAAAAATGTTTTATAATG  6350
                                                        
seq2  --------------------------------------------------  0

seq1  GAAGAATTCGATGGAAAAACCTTCAGTTAGAAAGGAAAGCAAAGAAAACA  6400
                                                        
seq2  --------------------------------------------------  0

seq1  TATTTTTCCTATTAGAGAAAATGGAGAGAATTATTTTTTGATAAAATTCG  6450
                                                        
seq2  --------------------------------------------------  0

seq1  AGATGTTCTTAAACAGCAATTGGATAAAAAGAAAAAAATTACAGTAAACG  6500
                                                        
seq2  --------------------------------------------------  0

seq1  TGGAAAAATGGAGAAACTTGATAGAAAAGAAAAAAACCTGGACAAATGGA  6550
                                                        
seq2  --------------------------------------------------  0

seq1  AAACAGAAAAAACTCATGTTCACTAGTGTGCAAAGAAGAGATCAACATTT  6600
                                                        
seq2  --------------------------------------------------  0

seq1  TAATATAAACATACAAGATTGAATTCTAATTTATTCATGAGAAAGTTGAC  6650
                                                        
seq2  --------------------------------------------------  0

seq1  CAAATTAATACAAAAAATGTGTTAAAATGAAGAATTCAATGAAAAAAAAC  6700
                                                        
seq2  --------------------------------------------------  0

seq1  TACTGGTAGAAAGGAAAACATAGAAAACTTGTTTTTCCTATTAGAAAAAT  6750
                                                        
seq2  --------------------------------------------------  0

seq1  TGGATAGAAAAATTTTCTGATAAAATTCGAGATGTTCTTATACAGCATAT  6800
                                                        
seq2  --------------------------------------------------  0

seq1  TTGGTAAAAATGCGAAAATTATACAAAAATATGGATAAATTGTAAAAAAA  6850
                                                        
seq2  --------------------------------------------------  0

seq1  ATTGATGGAAAAAGGCTTGTATTATTGAAGACGTAGAAAAATCATGTTCA  6900
                                                        
seq2  --------------------------------------------------  0

seq1  CTATTTGAGAAAGTAGAGATCTTCGTTCATTGTTAAAATAGAAGATTTTA  6950
                                                        
seq2  --------------------------------------------------  0

seq1  TTAGAATGTATTTGTGAGAAAATTTAAAAAAATTATAAAAAATGTTTTAA  7000
                                                        
seq2  --------------------------------------------------  0

seq1  ATGGAGGAATTCTTTGGAAAACACTACTGGTAGAAAGGAAAGCGTAGAAA  7050
                                                        
seq2  --------------------------------------------------  0

seq1  ACATATATTTCTAATAGGAGAAAATTGAGCGAAATATTATTTGATGAAAT  7100
                                                        
seq2  --------------------------------------------------  0

seq1  TAGAGATGTTCTAATACATTATTTCTGATAAAAACATAAGAAAACAACAG  7150
                                                        
seq2  --------------------------------------------------  0

seq1  GAAAAAAATGTGTTAAAATGGAAGAATTCAATGAAAAAAAAAAAACTCCT  7200
                                                        
seq2  --------------------------------------------------  0

seq1  GGTAGAAAGGCAAACATAGAAAACCTGTTTTTCCTATTAGAAAAATTGGA  7250
                                                        
seq2  --------------------------------------------------  0

seq1  TAGAAACATTTTCTGATAAAATTCGAGATGTTCTTATACAGCATATTTGG  7300
                                                        
seq2  --------------------------------------------------  0

seq1  TAAAAATGCAAAAATTATACAAAAATATGGATAAGTTGTAAAAAAATTGA  7350
                                                        
seq2  --------------------------------------------------  0

seq1  TGGAAAAAGGCTTGTATTATTGAAGACGTAGAAAAATAATGTTCACTATT  7400
                                                        
seq2  --------------------------------------------------  0

seq1  TGAGAAAGTAGAGATCTTCGTTGCAAGTTAAAATAGAAGATTTTATTAGA  7450
                                                        
seq2  --------------------------------------------------  0

seq1  ATGTATTTGTGAGATAATTAAAAAAAATTATAAAAAATGTTTTAAAATGG  7500
                                                        
seq2  --------------------------------------------------  0

seq1  AGGAATTCTTTGGAAAACACTACTGGTAGAAAGGAATGCGTATTAAACAT  7550
                                                        
seq2  --------------------------------------------------  0

seq1  ATTTTTCTAATAGGAGAAAATTGAGAGAAACATTATTTGATGAAATTCGA  7600
                                                        
seq2  --------------------------------------------------  0

seq1  GATGTTCTAATACATTATTTCTGATAAAAATGTAAGAAAACTACAGGAAA  7650
                                                        
seq2  --------------------------------------------------  0

seq1  AAATGTGGTTAAAATGGATGAAATTGATGGAAAAACAGGCTGTTCAAATG  7700
                                                        
seq2  --------------------------------------------------  0

seq1  GAAAACTTAGAAAATTCATGTTCACTATTTTCAAAACTAGAGATCATCAT  7750
                                                        
seq2  --------------------------------------------------  0

seq1  ATTACGATAAAATAAAAGATTATATTCGAATGTATTTGTGACAAAATTGA  7800
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAAATATTTTAAAAACGTGTTAAAATGTAAATAATAGATTGAAAAATC  7850
                                                        
seq2  --------------------------------------------------  0

seq1  ACCGGGTAAAGAGGAAAACGTAGAAAACATATTCTTTTTCATTAGAGAAA  7900
                                                        
seq2  --------------------------------------------------  0

seq1  AAGGATAGAAACATTTTCTGATAAATTTCGAGATGTTCTTATACACTATT  7950
                                                        
seq2  --------------------------------------------------  0

seq1  TCTGATAAAAGTGAAAACTGTACAGAAAAATGTGGTTAAAATGGAGGAAA  8000
                                                        
seq2  --------------------------------------------------  0

seq1  TTGATTGAAAAACGATTGGTCAAATCGAAAATGGAGAAAACTCATGTTCA  8050
                                                        
seq2  --------------------------------------------------  0

seq1  CTATGAGAGACAGCTGATGTGATCATTGTAAGATAGGGTAGTGCGAGGGA  8100
                                                        
seq2  --------------------------------------------------  0

seq1  GGGTATGGGGGACTTTTGGGATAGAATTGGAAACGTAATTGAGGAAAATA  8150
                                                        
seq2  --------------------------------------------------  0

seq1  TCTAATTTTAAAAAAATACAAAATGTTATTCAAATATATTTTTGAGAAAA  8200
                                                        
seq2  --------------------------------------------------  0

seq1  TTGACAAAATTTATAGAAAAATGTTTTATAATGGAAGAATTCGATGGAAA  8250
                                                        
seq2  --------------------------------------------------  0

seq1  AACCTTCAGTTACAATGGAAAACAAAGGAAACATATTTTTCCTAATAGAG  8300
                                                        
seq2  --------------------------------------------------  0

seq1  AAAATGGAGAGAATCATTTTCTGATAAAATTCGAGATGTTCTTAAACAGC  8350
                                                        
seq2  --------------------------------------------------  0

seq1  ATTTGGATAAAAAGAAAAAAATTACAATAAACATGGAAAAATGGAGGAAT  8400
                                                        
seq2  --------------------------------------------------  0

seq1  TTGATAGAAAAAAAAACCTGGTCAAATGGAAAACAGGGAAAACTCATGTT  8450
                                                        
seq2  --------------------------------------------------  0

seq1  CACAAGTTTGCAAAGAAGAGATCAATATTTTAATATAAACATACAAGATT  8500
                                                        
seq2  --------------------------------------------------  0

seq1  GAATTGAATTTATTATGAGAAAGTTGACCAAATTAATACAAAAATGTGTT  8550
                                                        
seq2  --------------------------------------------------  0

seq1  AAAATGGAAGAATTCAATGAAAAAAAAACTACTGGTAGAAAGGCAAACAT  8600
                                                        
seq2  --------------------------------------------------  0

seq1  AGAAAACCTGTTTTTCCTATTAGAAAAATTGGATAGAAACATTTTCTGAT  8650
                                                        
seq2  --------------------------------------------------  0

seq1  AAAATTCGAGATGTTCTTATACAGCATATTTGGTAAAAATGCAAAAATTA  8700
                                                        
seq2  --------------------------------------------------  0

seq1  TACAAAAATATGGATAAGTTGTAAAAAAATTGATGGAAAAAGGCTTGTAT  8750
                                                        
seq2  --------------------------------------------------  0

seq1  TATTGAAGACGTAGAAAAATAATGTTCACTATTTGAGAGAGTAGAGATCT  8800
                                                        
seq2  --------------------------------------------------  0

seq1  TCATTGCAAGTTAAAATAGAGATTTTATTAGAATGTATTTGTGAGAAAAT  8850
                    ||||||   ||||||  |||| ||||   |||||  
seq2  --------------AATAGAAGATTTATT--AATG-ATTT---AGAAA--  28

seq1  TGAAAAAAAATTATAAAAAATGTTTTAAAATGGAGGAATTCTTTGGAAAA  8900
      ||   ||||||||||||||||||||   ||| |||  ||||||     ||
seq2  TG---AAAAATTATAAAAAATGTTT---AAT-GAG--ATTCTT----GAA  65

seq1  CACTACTGGTAGAAAGGAATGCGTATTAAACATATTTTTCTAATAGGAGA  8950
      ||||||| ||||||  ||| || |||  ||||||||| ||||||| ||||
seq2  CACTACT-GTAGAA--GAAAGCATAT--AACATATTTATCTAATA-GAGA  109

seq1  AAATTGAGAGAAACATTATTTGATGAAATTCGAGATGTTCTAATACATTA  9000
      ||  |||||||||||||||| ||||||||||  ||||| |||||||||  
seq2  AA--TGAGAGAAACATTATTCGATGAAATTCAGGATGTCCTAATACAT--  155

seq1  TTTCTGATAAAAATGTAAG-AAAACTACAGGAAAAAATGTGGTTAAAATG  9049
       |||||| | ||||||||| |||||||  |||||||||||||||||||| 
seq2  ATTCTGAAATAAATGTAAGAAAAACTATCGGAAAAAATGTGGTTAAAATT  205

seq1  GATGAAATTGATGGAAAAACAGGCTGTTCAAATGGAAAACTTAGAAAATT  9099
      ||||||| |||| |||||||||||||| |||||| |||||||||||||||
seq2  GATGAAA-TGATTGAAAAACAGGCTGTACAAATGAAAAACTTAGAAAATT  254

seq1  CATGTTCACTATTTTCAAAACTATAGATCATCATATTACGATAAAATAAA  9149
      |||||||||||||| |||||  | ||||||||||||||||||||||||||
seq2  CATGTTCACTATTTGCAAAAGCAGAGATCATCATATTACGATAAAATAAA  304

seq1  AGATTATATTCG-AATGTATTTGTGACAAAATTGAAAAAAAATATTTTAA  9198
      |||||||||||| |||||| |||||||||||||| |||||||||||||||
seq2  AGATTATATTCGAAATGTA-TTGTGACAAAATTG-AAAAAAATATTTTAA  352

seq1  AAACGTGTTAAAATGGAAATAATAGATTGAAAAATCACCGGGTAAAGAGG  9248
      ||| ||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAATGTGTTAAAATGGAAATAATAGATTGAAAAATCACCAGGTAAAGAGG  402

seq1  AAAACGTAGAAAACATATTCTTTTTCATTAGAGAAAAAGGAGAGAAACAT  9298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACGTAGAAAACATATTCTTTTTCATTAGAGAAAAAGGAGAGAAACAT  452

seq1  TTTCTGATAAATTTTGAGATGTTCTTATACACTATTTCTGATAAAAGTGA  9348
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTTCTGATAAATTTCGAGATGTTCTTATACACTATTTCTGATAAAAGTGA  502

seq1  AAACTGTACAGAAAAATGTGGTTAAAATGGAGGAAATTGATTGAAAAACG  9398
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAACTGTACAGAAAAATGTGGTTAAAATGGAGGAAATTGATTGAAAATCG  552

seq1  ATTGGTCAAATCGAAAATGGAGAAAACTCATGTTCACTATGAGAGACAGC  9448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTCAAATCGAAAATGGAGAAAACTCATGTTCACTATGAGAGACAGC  602

seq1  TGAGGTCATCATTGTAAGATAGGGGAGTGCGAGGGAGGGTATGGGGGACT  9498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCATCATTGTAAGATAGGGGAGTGCGAGGGAGGGTATGGGGGACT  652

seq1  TTTGGGATAGAATTGGAAACGTAATTGAGGAAAATACCTAATTTAAAAAA  9548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGATAGAATTGGAAACGTAATTGAGGAAAATACCTAATTTAAAAAA  702

seq1  AATACAAGATGTTATTCAAATATATTTTTGAGAAAATTGACAAAATTTAT  9598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAGATGTTATTCAAATATATTTTTGAGAAAATTGACAAAATTTAT  752

seq1  AGAAAAATGTTTTATAATGGAAGAATTCGATGGAAAAACCTTCAGTTAGA  9648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATGTTTTATAATGGAAGAATTCGATGGAAAAACCTTCAGTTAGA  802

seq1  AAGGAAAACAAAGAAAACATATTTTTCCTAATAGAGAAAATGGAGAGAAT  9698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAACAAAGAAAACATATTTTTCCTAATAGAGAAAATGGAGAGAAT  852

seq1  CATTTTCTGATAAAATTCGAAATGTTCTTAAACAGCATTTGGATAAAAAG  9748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTGATAAAATTCGAAATGTTCTTAAACAGCATTTGGATAAAAAG  902

seq1  TAAAAAATTACAATAAACGTGGAAAAATGGAGGAATTTGATAGAAAAAAA  9798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATTACAATAAACGTGGAAAAATGGAGGAATTTGATAGAAAAAAA  952

seq1  AACCTGGTCAAATGGAAAACAGGGAAAACTCATGTTCACAAGTTTTGCAA  9848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGTCAAATGGAAAACAGGGAAAACTCATGTTCACAAGTTTTGCAA  1002

seq1  AGAAGAGATCAATATTTTAATATAAACATACATGATTGAATTGAATTTAT  9898
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGAAGAGATCAATATTTTAATATAAACATTCATGATTGAATTGAATTTAT  1052

seq1  TATGAGAAAGTTGACCAAATTAATACAAAAATGTGTTAAAATGGAAGAAT  9948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGAAAGTTGACCAAATTAATACAAAAATGTGTTAAAATGGAAGAAT  1102

seq1  TC  9950
      ||
seq2  TC  1104

seq1: chrX_123303826_123304448
seq2: B6Ng01-108I14.g_69_691

seq1  GAATTCTTTGGAAAACACTACTGGTAGAAAGGAATGCGTATTAAACATAT  50
      |||||||||||||||||||||||||||| ||||| |||||||||||||||
seq2  GAATTCTTTGGAAAACACTACTGGTAGATAGGAAAGCGTATTAAACATAT  50

seq1  TTTTCTAATAGGAGAAAATTGAGAGAAACATTATTTGATGAAATTCGAGA  100
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTTCTAATAGGAGAAAATTGAGAGAAATATTATTTGATGAAATTCGAGA  100

seq1  TGTTCTAATACATTATTTCTGATAAAAATGTAAGAAAACTACAGGAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTAATACATTATTTCTGATAAAAATGTAAGAAAACTACAGGAAAAA  150

seq1  ATGTGGTTAAAATGGATGAAATTGATGGAAAAACAGGCTGTTCAAATGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTTAAAATGGATGAAATTGATGGAAAAACAGGCTGTTCAAATGGA  200

seq1  AAACTTAGAAAATTCATGTTCACTATTTTCAAAACTATAGATCATCATAT  250
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAGAAAATTCATGTTCACTATTTTCAAAACTATAGATCATCATAT  250

seq1  TACGATAAAATAAAAGATTATATTCGAATGTATTTGTGACAAAATTGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TACGATAAAATAAAAGATTATATTCGAATGTATTTGTGACAAAATTG-AA  299

seq1  AAAAATATTTTAAAAACGTGTTAAAATGGAAATAATAGATTGAAAAATCA  350
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAAAATATTTTAAAAATGTGTTAAAATGGAAATAATAGATTGAAAAATCA  349

seq1  CCGGGTAAAGAGGAAAACGTAGAAAACATATTCTTTTTCATTAGAGAAAA  400
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTAAAGAGGAAAACGTAGAAAACATATTCTTTTTCATTAGAGAAAA  399

seq1  AGGAGAGAAACATTTTCTGATAAATTTTGAGATGTTCTTATACACTATTT  450
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAAAACATTTTCTGATAAATTTTGAGATGTTCTTATACACTATTT  449

seq1  CTGATAAAAGTGAAAACTGTACAGAAAAATGTGGTTAAAATGGAGGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAAAAGTGAAAACTGTACAGAAAAATGTGGTTAAAATGGAGGAAAT  499

seq1  TGATTGAAAAACGATTGGTCAAATCGAAAATGGAGAAAACTCATGTTCAC  550
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGATTGAAAATCGATTGGTCAAATCGAAAATGGAGAAAACTCATGTTCAC  549

seq1  TATGAGAGACAGCTGAGGTCATCATTGTAAGATAGGGGAGTGCGAGGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGAGACAGCTGAGGTCATCATTGTAAGATAGGGGAGTGCGAGGGAG  599

seq1  GGTATGGGGGAC-TTTTGGGATAG  623
      |||||||||||| |||||||||||
seq2  GGTATGGGGGACTTTTTGGGATAG  623