BAC Information

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BAC

Clone NameB6Ng01-108N01
ChromosomeX (Build37)
Map Location 46,675,417 - 46,759,495
singlet/doubletdoublet
Overlap genenone
Upstream geneBcorl1, Elf4, Aifm1, Rab33a, Suhw3, Slc25a14, Gpr119, Rbmx2, LOC665752, Gm595, EG637758, LOC100040295, Enox2
Downstream gene1100001E04Rik, LOC100041697, Olfr1320, Olfr1321, Igsf1, Olfr1322, LOC100040344, Olfr1323, EG665816
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108N01.bB6Ng01-108N01.g
ACCDH915899DH915900
length1501,096
definitionDH915899|Mus musculus domesticus DNA, BAC clone: B6Ng01-108N01, 5' end.DH915900|Mus musculus domesticus DNA, BAC clone: B6Ng01-108N01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,675,417 - 46,675,566)(46,758,400 - 46,759,495)
sequence
cactaatgaaggcctaggtatagaacagagaaaacaggattgattaataa
agaggtaagccaacaattttatttaatgactatattaataatctattgtt
ttacacttgggagagagaagaaagcaatcacaggtggggagggagggagg

gaattcttataactcaattatatgaagacaaaataaagttttttaaaatg
gacttaagattaagatagacatttcacaaaagaagaaaaacagatggcaa
atatttgcacatgaaaagatgctcaacatcgttagtcattaaagaaatgc
aaatcaaatccacaatgagcttcaactatacacccattaatctgtcgaaa
atgcagatgactgaccatagattatctgggaggattgtcaacagttagct
ccttcatttatggaagaatatgaaaaactgcatccattttggcaagcaac
ctggtattttcttttatttagctagttttctaaattgaaatggttggttg
ttttggagaattttgtatttggatgctgtattcataccctcccacttctt
ccttctaccccatcactccccccatataaccctgctctcttaaactcaat
actatatcttcattagtagatatgattaagtattttcttttaaaaattaa
agatatatttgctttataatctactcagttctctcctatgtagttacccc
taaaacaaaggatttatttgtccaacaacccacaaacgtttattttagcc
ttgatttaatacttccagttttaaataatcacctggttattgccatgtaa
gtggatacatattgtatgtatccatatttgaataataagattcacctgaa
aatatagattcacctgagaaatttagtatacaattgcttatgtacaaaaa
tatgagtgattatagaaacaaaatagatttaaaaaaacataaaatgtggt
agtaaagaaatgactggttcataagaaaggggattctttttcggtgtctc
tgtgaccagatcatgcatacagaccttgcagtcaaaaaaaaagatgtagt
catagaacgactctttgctagtaaccaatataaatatttaaataattata
atacatcaatgctagcctttcttcttcctacatgaattactttatgacac
aaggaagaatgcaatttgtagcagctttgatattaaagtactgaatgtta
aaggaggaggaaagcaaatgagtttatgtgtccttatacacgtaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_46675417_46675566
seq2: B6Ng01-108N01.b_53_202

seq1  CACTAATGAAGGCCTAGGTATAGAACAGAGAAAACAGGATTGATTAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATGAAGGCCTAGGTATAGAACAGAGAAAACAGGATTGATTAATAA  50

seq1  AGAGGTAAGCCAACAATTTTATTTAATGACTATATTAATAATCTATTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAAGCCAACAATTTTATTTAATGACTATATTAATAATCTATTGTT  100

seq1  TTACACTTGGGAGAGAGAAGAAAGCAATCACAGGTGGGGAGGGAGGGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACTTGGGAGAGAGAAGAAAGCAATCACAGGTGGGGAGGGAGGGAGG  150

seq1: chrX_46758400_46759495
seq2: B6Ng01-108N01.g_70_1165 (reverse)

seq1  TCTAC-TGTATAAGGACACTATAACTTCCATTTGCCTTTCCCTCCTTCCT  49
      ||||| |||||||||||||   ||||  |||||||  || ||||| ||||
seq2  TCTACGTGTATAAGGACACATAAACT--CATTTGC--TTTCCTCC-TCCT  45

seq1  TTAACCTTCTGTACTTTTATATCAATGCTGCTACAATTTGCATTCTTCTT  99
      ||||| ||| ||||||| ||||||| |||||||||| ||||||||||| |
seq2  TTAACATTCAGTACTTTAATATCAAAGCTGCTACAAATTGCATTCTTCCT  95

seq1  TGTGTCAT-AAGT-ATTCATGTA-GAAGATGAAAGGCTAGCATTGATGTT  146
      |||||||| |||| ||||||||| ||||| |||||||||||||||||| |
seq2  TGTGTCATAAAGTAATTCATGTAGGAAGAAGAAAGGCTAGCATTGATG-T  144

seq1  ATTATAATTATTTAAATA-TTATA-TGTGTACTAGCAAAGAGTCGTTCTA  194
      |||||||||||||||||| ||||| ||  |||||||||||||||||||||
seq2  ATTATAATTATTTAAATATTTATATTGGTTACTAGCAAAGAGTCGTTCTA  194

seq1  TGACTACATCTTTTTCTTTGACTGCAAGGTCTGTATGCATGATCTGGTCA  244
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGACTACATCTTTTTTTTTGACTGCAAGGTCTGTATGCATGATCTGGTCA  244

seq1  CAGAGACACCGAAAAAGAATCCCCTTTCTTATGAACCAGTCATTTCTTTA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACACCGAAAAAGAATCCCCTTTCTTATGAACCAGTCATTTCTTTA  294

seq1  CTACCACATTTTATGTTTTTTTAAATCTATTTTGTTTCTATAATCACTCA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCACATTTTATGTTTTTTTAAATCTATTTTGTTTCTATAATCACTCA  344

seq1  TATTTTTGTACATAAGCAATTGTATACTAAATTTCTCAGGTGAATCTATA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTGTACATAAGCAATTGTATACTAAATTTCTCAGGTGAATCTATA  394

seq1  TTTTCAGGTGAATCTTATTATTCAAATATGGATACATACAATATGTATCC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGGTGAATCTTATTATTCAAATATGGATACATACAATATGTATCC  444

seq1  ACTTACATGGCAATAACCAGGTGATTATTTAAAACTGGAAGTATTAAATC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACATGGCAATAACCAGGTGATTATTTAAAACTGGAAGTATTAAATC  494

seq1  AAGGCTAAAATAAACGTTTGTGGGTTGTTGGACAAATAAATCCTTTGTTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTAAAATAAACGTTTGTGGGTTGTTGGACAAATAAATCCTTTGTTT  544

seq1  TAGGGGTAACTACATAGGAGAGAACTGAGTAGATTATAAAGCAAATATAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGTAACTACATAGGAGAGAACTGAGTAGATTATAAAGCAAATATAT  594

seq1  CTTTAATTTTTAAAAGAAAATACTTAATCATATCTACTAATGAAGATATA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATTTTTAAAAGAAAATACTTAATCATATCTACTAATGAAGATATA  644

seq1  GTATTGAGTTTAAGAGAGCAGGGTTATATGGGGGGAGTGATGGGGTAGAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGAGTTTAAGAGAGCAGGGTTATATGGGGGGAGTGATGGGGTAGAA  694

seq1  GGAAGAAGTGGGAGGGTATGAATACAGCATCCAAATACAAAATTCTCCAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAGTGGGAGGGTATGAATACAGCATCCAAATACAAAATTCTCCAA  744

seq1  AACAACCAACCATTTCAATTTAGAAAACTAGCTAAATAAAAGAAAATACC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACCAACCATTTCAATTTAGAAAACTAGCTAAATAAAAGAAAATACC  794

seq1  AGGTTGCTTGCCAAAATGGATGCAGTTTTTCATATTCTTCCATAAATGAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGCTTGCCAAAATGGATGCAGTTTTTCATATTCTTCCATAAATGAA  844

seq1  GGAGCTAACTGTTGACAATCCTCCCAGATAATCTATGGTCAGTCATCTGC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTAACTGTTGACAATCCTCCCAGATAATCTATGGTCAGTCATCTGC  894

seq1  ATTTTCGACAGATTAATGGGTGTATAGTTGAAGCTCATTGTGGATTTGAT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCGACAGATTAATGGGTGTATAGTTGAAGCTCATTGTGGATTTGAT  944

seq1  TTGCATTTCTTTAATGACTAACGATGTTGAGCATCTTTTCATGTGCAAAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTTCTTTAATGACTAACGATGTTGAGCATCTTTTCATGTGCAAAT  994

seq1  ATTTGCCATCTGTTTTTCTTCTTTTGTGAAATGTCTATCTTAATCTTAAG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCATCTGTTTTTCTTCTTTTGTGAAATGTCTATCTTAATCTTAAG  1044

seq1  TCCATTTTAAAAAACTTTATTTTGTCTTCATATAATTGAGTTATAAGAAT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTTAAAAAACTTTATTTTGTCTTCATATAATTGAGTTATAAGAAT  1094

seq1  TC  1096
      ||
seq2  TC  1096