BAC Information

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BAC

Clone NameB6Ng01-112K23
ChromosomeX (Build37)
Map Location 67,271,301 - 67,424,891
singlet/doubletdoublet
Overlap genenone
Upstream geneAff2, EG666577, 1700020N15Rik
Downstream geneIds, 1110012L19Rik, 4930567H17Rik, LOC100040304, LOC628002, LOC628012, BC023829, EG547447, LOC666981, LOC100040409, LOC628053, LOC100040432, EG280121, LOC666993, Ppia-psx_466.1, EG628080, G630014P10Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112K23.bB6Ng01-112K23.g
ACCDH918684DH918685
length1,1691,189
definitionDH918684|Mus musculus domesticus DNA, BAC clone: B6Ng01-112K23, 5' end.DH918685|Mus musculus domesticus DNA, BAC clone: B6Ng01-112K23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,271,301 - 67,272,183)(67,423,711 - 67,424,891)
sequence
gaattcaagaagttagactctagaaaaccaaataaccctattaaataatg
gggtacagagctaaagaaagaattcttcaactgaagaaatttgaatggct
aagaagcacctgaaaaaatgttcaacatccttagtcatcagggaaatgca
aatcaaaacaaccctgagattccacttcacaccagtcataatggctaaga
ttagaaactcaggtgacagcagatgctagcaaggatgtagagaaagagga
acagtcctccattgctggtgggattgcaagctgctgcaagcactctggaa
gtcagtatggcatttcctcagaaaattggacatagtactacctgaagacc
cagcaataccactcttgggcacatacccagaagatgctccaacatgtaat
aagaacacatgctccattatgttcatagcagccttaatataatagccaga
agctgaaaagaacccagaggtcccttaacagaagaatggatacagaaaat
gtggtacatttacacaatggagtactactcagtgattaaaaatgatgaat
tcatgaagttatttggcaaatggatggaactagaaaacattatcccgagt
gaggtaacccaatcacaaaagaagtcacttgatatgcactcactgataag
tggatattagcccagaaacctagaatacccaagatacaatttgcaaaaca
caagaaaatcaagaagaaggaagaccaatgggtggatacttcattcctcc
ctagaacagggaacaaaatacccatggaagcagttacaaaatatctaaaa
caaacaagaaacccccaaataccttagttttaaatgaactacacagctat
agcaatccaaaaagcaagattctagcctaaaaacagatatataggccaat
gaaaaattattgagaacccagaaatatatctgtgtatctatattcaactg
gttttaataaagcagcagaaccatccactgccaaagagatggcttttctt
tacgtttaaaaaaaaaccttaattttctgttttcttataatatatttctt
gtaagcaataatgagctttatctgttccctgtgggactatgcccgggccc
tagcaaacacagaaagttgaatgctcccagttcaacatattgaattgtat
tcaagccaatggaggagct
gaattccaaaacaaatctgagctggccccatgagggctttcaccctagag
aaggtcaccttggcagatttctgtacaacaagctttgatgactggtggaa
agcaaacagaaaagtaggacagaaaaatatttgcatctgctacatttgtc
acacaaatcacagaccctctctgtttaaagagagatcagaaccaggcttg
ctgaatgactctcagggaatgaatgggatgatttaagcacatcggcatct
ggtttattttatgtttagtgtttttctgaagatttgtagtactgggaata
aagagtgcacaaacgctcgtggaaggaagagaaagcttcaggccctctag
ggagcaggcaaaggtggccatcagaggctatatagtttaaaggagcccat
accttggcagcgtgccaggctccatctggaattgctagcagagataatga
tgatgtactgttatgagtgcctactgtatactaggttccatagtgattat
tttacatgtgtaattcccattaatttactctgtgaacctctgcagtaatg
tcatctgattcaacttatggataagaagcttaggctgagagagttaaact
gtttcttaggatacatatatacataagatgtggagccagggttcaaaacc
ctcaatatgaaaggagttgaatgagtatatttttgcaacacctcactcac
tagtatgacatcctttactatgtaaatgaatgcaaatttgaggcttagtt
ctacaaagtagaagctgtgtgatgttggcaagtggtttaacctctctgag
tctctagttgttttactgaaaacatatttgcacttcttcataggatgaat
gcagactacaaaaaaatgaaagaaaaagaaaaagaaagaaagagtgaaag
gaagaaagtaagcaagcaagcaagcaacatcttttggggctggttaagtg
atctgtgaatgacaagtagagaggtggttcaggctcacgagtccataaaa
tcattatgaggaagaggtcaggcaggattcagaagctggtgttctccttt
atagcaggatgggtgcaggtcagatctggggagacgaagcaatggtcctt
aaagaaccatatgctctccagccatgaactggaaagaggaagtatccagg
actctaagaaagggggaagagacctttttcttaaagctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_67271301_67272183
seq2: B6Ng01-112K23.b_340_1216

seq1  CTCTGGAAGTCAGTATGGCATTTCCTCAGAAAATTGGACATAGTACTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAAGTCAGTATGGCATTTCCTCAGAAAATTGGACATAGTACTACC  50

seq1  TGAAGACCCAGCAATACCACTCTTGGGCACATACCCAGAAGATGCTCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACCCAGCAATACCACTCTTGGGCACATACCCAGAAGATGCTCCAA  100

seq1  CATGTAATAAGAACACATGCTCCATTATGTTCATAGCAGCCTTAATATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAATAAGAACACATGCTCCATTATGTTCATAGCAGCCTTAATATAA  150

seq1  TAGCCAGAAGCTGAAAAGAACCCAGAGGTCCCTTAACAGAAGAATGGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAGAAGCTGAAAAGAACCCAGAGGTCCCTTAACAGAAGAATGGATA  200

seq1  CAGAAAATGTGGTACATTTACACAATGGAGTACTACTCAGTGATTAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATGTGGTACATTTACACAATGGAGTACTACTCAGTGATTAAAAA  250

seq1  TGATGAATTCATGAAGTTATTTGGCAAATGGATGGAACTAGAAAACATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAATTCATGAAGTTATTTGGCAAATGGATGGAACTAGAAAACATTA  300

seq1  TCCCGAGTGAGGTAACCCAATCACAAAAGAAGTCACTTGATATGCACTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGAGTGAGGTAACCCAATCACAAAAGAAGTCACTTGATATGCACTCA  350

seq1  CTGATAAGTGGATATTAGCCCAGAAACCTAGAATACCCAAGATACAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAAGTGGATATTAGCCCAGAAACCTAGAATACCCAAGATACAATTT  400

seq1  GCAAAACACAAGAAAATCAAGAAGAAGGAAGACCAATGGGTGGATACTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACACAAGAAAATCAAGAAGAAGGAAGACCAATGGGTGGATACTTC  450

seq1  ATTCCTCCCTAGAACAGGGAACAAAATACCCATGGAAGCAGTTACAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCCCTAGAACAGGGAACAAAATACCCATGGAAGCAGTTACAAAAT  500

seq1  ATCTAAAACAAACAAGAAACCCCCAAATACCTTAGTTTTAAATGAACTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAACAAACAAGAAACCCCCAAATACCTTAGTTTTAAATGAACTAC  550

seq1  ACAGCTATAGCAATCCAAAAAGCAAGATTCTAGCCTAAAAACAGATATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTATAGCAATCCAAAAAGCAAGATTCTAGCCTAAAAACAGATATAT  600

seq1  AGGCCAATGAAAAATTATTGAGAACCCAGAAATATATCTGTGTATCTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAATGAAAAATTATTGAGAACCCAGAAATATATCTGTGTATCTATA  650

seq1  TTCAACTGGTTTTAATAAAGCAGCAGAACCATCCACTGCAAAAGAGATGG  700
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTCAACTGGTTTTAATAAAGCAGCAGAACCATCCACTGCCAAAGAGATGG  700

seq1  CTTTTCTTTACGTTTAAAAAAAAAAACCTTATTTTTCTGTTTTTTCTTTT  750
      |||||||||||||||  |||||||||||||| |||||||  |||||||  
seq2  CTTTTCTTTACGTTT--AAAAAAAAACCTTAATTTTCTG--TTTTCTT--  744

seq1  ATTAATATATTTCTTGTATGCAATAATGAGCTTTATCTGTCCCTTGTGAG  800
        |||||||||||||||| ||||||||||||||||||||| || |||| |
seq2  -ATAATATATTTCTTGTAAGCAATAATGAGCTTTATCTGTTCCCTGTGGG  793

seq1  ACTATG-CCGGGGCCTAGCAAACACAGAA--GTGGATGCTCACAG-TCAA  846
      |||||| ||||| ||||||||||||||||   || |||||| ||| ||||
seq2  ACTATGCCCGGGCCCTAGCAAACACAGAAAGTTGAATGCTCCCAGTTCAA  843

seq1  C-TATTGGATGGATCACAGGGCCCCCAATGGAGGAGCT  883
      | ||||| || |    || |    ||||||||||||||
seq2  CATATTGAATTGTATTCAAG----CCAATGGAGGAGCT  877

seq1: chrX_67423711_67424891
seq2: B6Ng01-112K23.g_69_1256 (reverse)

seq1  AGCTTT---AGAAAGGTC-CTT-CCCCTTTCTCTAG-GTCCTGGTTACCT  44
      ||||||   | ||||||| ||| ||||||||| ||| ||||||| ||| |
seq2  AGCTTTAAGAAAAAGGTCTCTTCCCCCTTTCT-TAGAGTCCTGGATACTT  49

seq1  CCTCTT--CAG-TCATGGCT-GAGAGCATATGG-TCTCTAAGGGCCATTG  89
      ||||||  ||| |||||||| |||||||||||| ||| ||||| ||||||
seq2  CCTCTTTCCAGTTCATGGCTGGAGAGCATATGGTTCTTTAAGGACCATTG  99

seq1  CTTCGATCT-CACAGATTCTGACCTGCA-CCATCCTTGCTATAAA-GAGA  136
      ||||| ||| | |||| ||||||||||| |||||| ||||||||| ||||
seq2  CTTCG-TCTCCCCAGA-TCTGACCTGCACCCATCC-TGCTATAAAGGAGA  146

seq1  ACACAGGCTTCTGGAATCCTGCCTGACCTC-TCCTCAT-ATGATTTTATG  184
      ||||  |||||| ||||||||||||||||| ||||||| |||||||||||
seq2  ACACCAGCTTCT-GAATCCTGCCTGACCTCTTCCTCATAATGATTTTATG  195

seq1  GACTCGTGGGCCTGGAACCACCTCTCCTACTTGTCATTCACAGATCACTT  234
      |||||||| |||| ||||||||||| ||||||||||||||||||||||||
seq2  GACTCGTGAGCCT-GAACCACCTCT-CTACTTGTCATTCACAGATCACTT  243

seq1  AACCAGCCCCAAAAGATTGTTGCTTGCTTGCTTGCTTACTTTCTTCCTTT  284
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AACCAGCCCCAAAAGA-TGTTGCTTGCTTGCTTGCTTACTTTCTTCCTTT  292

seq1  CACTCTTTCTTTCTTTTTCTTTTTCTTTCATTTTTTTTGTAGTCTGCATT  334
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CACTCTTTCTTTCTTTTTCTTTTTCTTTCA-TTTTTTTGTAGTCTGCATT  341

seq1  CATCCTATGAAGAAGTGCAAATATGTTTTCAGTAAAACAACTAGAGACTC  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTATGAAGAAGTGCAAATATGTTTTCAGTAAAACAACTAGAGACTC  391

seq1  AGAGAGGTTAAACCACTTGCCAACATCACACAGCTTCTACTTTGTAGAAC  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGTTAAACCACTTGCCAACATCACACAGCTTCTACTTTGTAGAAC  441

seq1  TAAGCCTCAAATTTGCATTCATTTACATAGTAAAGGATGTCATACTAGTG  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCTCAAATTTGCATTCATTTACATAGTAAAGGATGTCATACTAGTG  491

seq1  AGTGAGGTGTTGCAAAAATATACTCATTCAACTCCTTTCATATTGAGGGT  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGGTGTTGCAAAAATATACTCATTCAACTCCTTTCATATTGAGGGT  541

seq1  TTTGAACCCTGGCTCCACATCTTATGTATATATGTATCCTAAGAAACAGT  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACCCTGGCTCCACATCTTATGTATATATGTATCCTAAGAAACAGT  591

seq1  TTAACTCTCTCAGCCTAAGCTTCTTATCCATAAGTTGAATCAGATGACAT  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCTCTCAGCCTAAGCTTCTTATCCATAAGTTGAATCAGATGACAT  641

seq1  TACTGCAGAGGTTCACAGAGTAAATTAATGGGAATTACACATGTAAAATA  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCAGAGGTTCACAGAGTAAATTAATGGGAATTACACATGTAAAATA  691

seq1  ATCACTATGGAACCTAGTATACAGTAGGCACTCATAACAGTACATCATCA  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTATGGAACCTAGTATACAGTAGGCACTCATAACAGTACATCATCA  741

seq1  TTATCTCTGCTAGCAATTCCAGATGGAGCCTGGCACGCTGCCAAGGTATG  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCTGCTAGCAATTCCAGATGGAGCCTGGCACGCTGCCAAGGTATG  791

seq1  GGCTCCTTTAAACTATATAGCCTCTGATGGCCACCTTTGCCTGCTCCCTA  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTTTAAACTATATAGCCTCTGATGGCCACCTTTGCCTGCTCCCTA  841

seq1  GAGGGCCTGAAGCTTTCTCTTCCTTCCACGAGCGTTTGTGCACTCTTTAT  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCCTGAAGCTTTCTCTTCCTTCCACGAGCGTTTGTGCACTCTTTAT  891

seq1  TCCCAGTACTACAAATCTTCAGAAAAACACTAAACATAAAATAAACCAGA  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTACTACAAATCTTCAGAAAAACACTAAACATAAAATAAACCAGA  941

seq1  TGCCGATGTGCTTAAATCATCCCATTCATTCCCTGAGAGTCATTCAGCAA  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGATGTGCTTAAATCATCCCATTCATTCCCTGAGAGTCATTCAGCAA  991

seq1  GCCTGGTTCTGATCTCTCTTTAAACAGAGAGGGTCTGTGATTTGTGTGAC  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTTCTGATCTCTCTTTAAACAGAGAGGGTCTGTGATTTGTGTGAC  1041

seq1  AAATGTAGCAGATGCAAATATTTTTCTGTCCTACTTTTCTGTTTGCTTTC  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAGCAGATGCAAATATTTTTCTGTCCTACTTTTCTGTTTGCTTTC  1091

seq1  CACCAGTCATCAAAGCTTGTTGTACAGAAATCTGCCAAGGTGACCTTCTC  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGTCATCAAAGCTTGTTGTACAGAAATCTGCCAAGGTGACCTTCTC  1141

seq1  TAGGGTGAAAGCCCTCATGGGGCCAGCTCAGATTTGTTTTGGAATTC  1181
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTGAAAGCCCTCATGGGGCCAGCTCAGATTTGTTTTGGAATTC  1188