BAC Information

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BAC

Clone NameB6Ng01-113E14
ChromosomeX (Build37)4 (Build37)
Map Location 159,109,908 - 159,110,4518,331,040 - 8,331,587
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneRai2, Gm47, Nhs, Reps2, LOC654358, LOC100041557
Downstream geneLOC667630, Rbbp7, 4932441K18Rik, LOC671250, Syap1, LOC100041607, Ctps2, S100g, LOC100040610, EG637051, Grpr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113E14.bB6Ng01-113E14.g
ACCDH919120DH919121
length919783
definitionDH919120|Mus musculus domesticus DNA, BAC clone: B6Ng01-113E14, 5' end.DH919121|Mus musculus domesticus DNA, BAC clone: B6Ng01-113E14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(159,109,908 - 159,110,451)(8,331,040 - 8,331,587)
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagataatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
acccctgcatccctggaataaaacctacttggtcaggattgatgattgct
ctaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaattgtggcttcataaaatgagttg
ggtagaataccttctacttctattttgtgaaatagtttgtgcagaaatgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtacaggttttcca
attttgttgagtatagccttttgtagaaggatctgatggtgtttttgatt
ttcttcaggatctgttgttatgtctcccttttcatttctgattttgttaa
ttaggattttgtctctgtgccctctagtgagtctagctaagggtttatct
atcttgttgattttctcaaagaaccaactcctcgtttggttaatctttga
ataattcttctgtttccacttgtttgatttcacccctgagttgattattt
cctgccgtctactcctcttgggtgaatttgcttccttttttttctacagc
tttagatgtgttgtcaagc
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcgaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattatgttgatggatttccgtatattaaacc
atccctgcctccctggaataaaatctacttggtcagggtggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgagtatttttgc
atcaatattcataagggaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaattgtggcttcatagaatgagttt
ggtagagttccttctacttctattttgtggaatagtttgtgcagaactgg
aattagatcttctttgaaggtctggtagaactctgcactaaacccatctg
gtcctggccttttttttggctgggagactattaatgactgcttctatttc
tttaacagatatgggattgtttagatcattaacttgatcctgatttaact
ttttgtacctgggatctgtttagaaatttgtccatttttgtccaggtttt
ccagtttttgttgagtatagccttttgtagaaggatctgatggtgttttg
gatttcttcggcatctgttgttatgcctccgttttcatttctgattttgg
taattagggatgttgttccttgtgccctctgtgagtctagctaagggttt
atctatcttgatgactttctccaagaaccaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_159109908_159110451
seq2: B6Ng01-113E14.b_425_966 (reverse)

seq1  GCTTGACAACACATCTAAAAGCCCTAG-AAAAAAAGGAAGCAAATTCACC  49
      |||||||||||||||| |||||  ||| ||||||||||||||||||||||
seq2  GCTTGACAACACATCT-AAAGCTGTAGAAAAAAAAGGAAGCAAATTCACC  49

seq1  CAAGAGGAGTAGACGGCAGGAAATAATCAAACTCAGGGGTGAAATCAACC  99
      |||||||||||||||||||||||||||| ||||||||||||||||||| |
seq2  CAAGAGGAGTAGACGGCAGGAAATAATC-AACTCAGGGGTGAAATCAAAC  98

seq1  AAGTGGAAACAAGAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTGG  149
      |||||||||| ||||||| ||||||||| |||||||||||||||||||||
seq2  AAGTGGAAAC-AGAAGAATTATTCAAAG-ATTAACCAAACGAGGAGTTGG  146

seq1  TTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAG  196

seq1  AGGGCACAGGGACAAAATCCTAATTAACAAAATCAGAAATGAAAAGGGAG  249
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCACAGAGACAAAATCCTAATTAACAAAATCAGAAATGAAAAGGGAG  246

seq1  ACATAACAACAGATCCTGAAG-AAATCCAAAACACCATCAGATCCTTCTA  298
      ||||||||||||||||||||| ||||| ||||||||||||||||||||||
seq2  ACATAACAACAGATCCTGAAGAAAATCAAAAACACCATCAGATCCTTCTA  296

seq1  CAAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAAT  348
      |||||||||||||||||||||| ||||||||||| |||||||||||||||
seq2  CAAAAGGCTATACTCAACAAAATTGGAAAACCTGTACGAAATGGACAAAT  346

seq1  TTCTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCAT  396

seq1  CTAAACAGTCCCATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCT  448
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTAAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTTATTAATAGTCT  446

seq1  CCCAACCAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATC  498
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATC  496

seq1  AGACCTTCAAAGAAGATCTAATTCCAATTCTGCACAAACTATTTCA  544
      |||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGACCTTCAAAGAAGATCTAATTCCATTTCTGCACAAACTATTTCA  542

seq1: chr4_8331040_8331587
seq2: B6Ng01-113E14.g_298_849 (reverse)

seq1  AGTTGGTTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACT  50
      ||||||||||| |||||| ||| |||||||||||||||||||||||||||
seq2  AGTTGGTTCTTGGAGAAAGTCATCAAGATAGATAAACCCTTAGCTAGACT  50

seq1  CACTAAAGGGTACAGGGAA-AGCAT-CCTAATTAACAAAATCAGAAATGA  98
      ||| | |||| ||| |||| | ||| |||||||| |||||||||||||||
seq2  CAC-AGAGGGCACAAGGAACAACATCCCTAATTACCAAAATCAGAAATGA  99

seq1  AAAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAGAT  148
      ||| |||| ||||||||||||| | |||||||||||||||||||||||||
seq2  AAACGGAGGCATAACAACAGATGCCGAAGAAATCCAAAACACCATCAGAT  149

seq1  CCTTCTACAAAAGGCTATACTCAAC-AAAACTGGAAAACCTGGAC-TAAA  196
      ||||||||||||||||||||||||| |||||||||||||||||||  |||
seq2  CCTTCTACAAAAGGCTATACTCAACAAAAACTGGAAAACCTGGACAAAAA  199

seq1  TGGACAAATTTCTAGACAGATACCAGGTAC-CAAAGTTAAATCAGGATCA  245
      |||||||||||||| |||||| ||||||||  ||||||||||||||||||
seq2  TGGACAAATTTCTAAACAGATCCCAGGTACAAAAAGTTAAATCAGGATCA  249

seq1  AGTTAATGATCTAAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTCA  295
      ||||||||||||||||| |||||||||   ||||||||||||||||||||
seq2  AGTTAATGATCTAAACAATCCCATATCTGTTAAAGAAATAGAAGCAGTCA  299

seq1  TTAATAGTCTCCCAGCCAAAAAAAAGCCCAGGACCAGATGGGTTTAGTGC  345
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTAATAGTCTCCCAGCCAAAAAAAAGGCCAGGACCAGATGGGTTTAGTGC  349

seq1  AGAGTTCTATCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAAAC  395
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCTACCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAAAC  399

seq1  TATTCCACAAAATAGAAGAAGAAGGTACTCTACCCAACTCATTCTATGAA  445
      |||||||||||||||||| |||||| |||||||| |||||||||||||||
seq2  TATTCCACAAAATAGAAGTAGAAGGAACTCTACCAAACTCATTCTATGAA  449

seq1  GCTACAATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGA  495
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGA  499

seq1  GATCTTCAGACCAATTTCCCTTATGAATATCGATGCAAAAATACTCAATA  545
      || ||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GAACTTCAGACCAATTTCCCTTATGAATATTGATGCAAAAATACTCAATA  549

seq1  AAA  548
      |||
seq2  AAA  552