BAC Information

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BAC

Clone NameB6Ng01-115L06
ChromosomeX (Build37)
Map Location 51,953,268 - 51,953,831
singlet/doubletsinglet
Overlap genenone
Upstream geneCxx1b, AW822252, 4930502E18Rik, 1700013H16Rik, EG547172, Zfp36l3, Xlr, LOC100040719, LOC100040730, LOC100040260, LOC100040271, LOC100040765, LOC194788, LOC100040789, LOC666072, LOC100040317, LOC625476, LOC625508, LOC666096, LOC100040867, LOC100040894
Downstream geneLOC666122, LOC666135, LOC100038960, EG666151, EG666161, EG666199, 4930527E24Rik, LOC626274, LOC625210, LOC100039055, LOC100039066, LOC676623
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115L06.bB6Ng01-115L06.g
ACCDH920898DH920899
length9681,236
definitionDH920898|Mus musculus domesticus DNA, BAC clone: B6Ng01-115L06, 5' end.DH920899|Mus musculus domesticus DNA, BAC clone: B6Ng01-115L06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagttgtgaacatgaattttccaatttagaaagtaaggtgaaa
cttgtattataactgagctagctagtgtatgcaatggtgtcattgtttgg
aggctaattataggatggatccctggatatggtagtgtctagatggtcca
tccttttgtctcagctccaaactttatctctgtaactccttccatgggtg
attttttccaattctaagaaggggcaaagtgtccacacttcggtcttcgt
tcttcagtttcatgtgttttgcagaattgtatcttatatctcgggtatat
taagtttctgggctaatatccacttatcagtgagaacatatcatttgagt
tcatttgtgattgtgttacctcaagcaggatgatgccctataggtccaat
catttgcctaggaatttcataaattcattccttttaatagctcagtagta
ctccattgtgtaaatgaatcacatttttgtatccattcctctgttgaggg
gcatctgggttctttccatgttctagctattataaataagtctgctatga
acatagtggagcatgtgtccttcttactggttgggacatcttctggatat
atgcccaggagaggtattgctcgatcctccagtagtaatatgtccaattt
tctgaggaaccaccagactgatttccagagtggttgtacaagcttgcaat
cccaccaacaatggaggagtgttcctctttctccacatcctcgccagcat
ctcctatcacctgaatttttgatcttagccattctgactggtgtgagatg
gaatctcagggttgttttgatttgcatttctgatgattaaggatgctgaa
cattttttcaggtgcttcacagccattcggtactcctcaggtgagaattc
tttgttaagctctgagccccatttttaatggggttatttgattttctgga
gtccaccttcttgagttc
gaattctctaccctctttaaattgtctaacgtttggtgcaccaatcacgt
gtcaatttgtgtatgtcttttgtttcattgtctgaatgattgtgtcgttg
tctgaattattgtgttgttgtctgaatgactgttttatgtttcatgttga
aaaaataaaacaaaaataaatggttaaaattttacctgctgattcactct
cagtttgcacaaaggaggctgagacagagccttcactttagccaaaaatc
aagcacagcaagaaaagtactactgaaaaacttgttctaaggcaaataag
ctaaaagtggtttttcctaaaaaattctctgcaagtttgtgattattgtg
ttttgcaaatgacaaattgtttttttatcatatagtacagctataaaaag
taaaattctttgattaatctaaatttataagattcatgtagccacttcat
ttggtttttgattggtcttaaaagtataaaaatgatctgcatatcttagt
catagaaaattggttcataagttatttgggtatgattaaaaagatgtaac
actggttacaaagttaacttaaaagtagtaactcagagatagagtcattt
tcaaacaaaagcacctggcataaaccagcccagaaaactagtcctctaaa
gatacttctaaattgagataaaattttgtttaattcttatcctaaaaggt
agacttataaagataaaattttaaaacaatgtctgtttaatgaaacatta
aaatttaaactgtcatgcattagtgaattggcacccaaattttgtaacgt
ggtagtgatgtttttagtattgattttaaggagaataaattgtttaaaat
tgggtcctgctttctaaaagttatagatatattctaatatttcaacaaaa
acttaaaaattatggttaaaattgccattgactacagtttgcagtttaat
caaagcttagacttttactgacccataattaagtttattacagatatcac
ttatagagtgcttatgctgctcactgggacattcagccatacaagcaagc
agaattaactagatatattcatctttgtgcagaaataagatcctacacaa
tcagttgactatggctgtggcttggcaggacataaaagtctaaggaatgt
tatgggttagtacttagagattgtcaaatccaagtcataggtcgacatta
atgtgcctgtctctcaagtaatcgaggtcctccatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_51953268_51953831
seq2: B6Ng01-115L06.b_45_608

seq1  GAATTCTCAGTTGTGAACATGAATTTTCCAATTTAGAAAGTAAGGTGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTTGTGAACATGAATTTTCCAATTTAGAAAGTAAGGTGAAA  50

seq1  CTTGTATTATAACTGAGCTAGCTAGTGTATGCAATGGTGTCATTGTTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATTATAACTGAGCTAGCTAGTGTATGCAATGGTGTCATTGTTTGG  100

seq1  AGGCTAATTATAGGATGGATCCCTGGATATGGTAGTGTCTAGATGGTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAATTATAGGATGGATCCCTGGATATGGTAGTGTCTAGATGGTCCA  150

seq1  TCCTTTTGTCTCAGCTCCAAACTTTATCTCTGTAACTCCTTCCATGGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTGTCTCAGCTCCAAACTTTATCTCTGTAACTCCTTCCATGGGTG  200

seq1  ATTTTTTCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTCGGTCTTCGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTCGGTCTTCGT  250

seq1  TCTTCAGTTTCATGTGTTTTGCAGAATTGTATCTTATATCTCGGGTATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGTTTCATGTGTTTTGCAGAATTGTATCTTATATCTCGGGTATAT  300

seq1  TAAGTTTCTGGGCTAATATCCACTTATCAGTGAGAACATATCATTTGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTCTGGGCTAATATCCACTTATCAGTGAGAACATATCATTTGAGT  350

seq1  TCATTTGTGATTGTGTTACCTCAAGCAGGATGATGCCCTATAGGTCCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGTGATTGTGTTACCTCAAGCAGGATGATGCCCTATAGGTCCAAT  400

seq1  CATTTGCCTAGGAATTTCATAAATTCATTCCTTTTAATAGCTCAGTAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCCTAGGAATTTCATAAATTCATTCCTTTTAATAGCTCAGTAGTA  450

seq1  CTCCATTGTGTAAATGAATCACATTTTTGTATCCATTCCTCTGTTGAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTGTGTAAATGAATCACATTTTTGTATCCATTCCTCTGTTGAGGG  500

seq1  GCATCTGGGTTCTTTCCATGTTCTAGCTATTATAAATAAGTCTGCTATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGGGTTCTTTCCATGTTCTAGCTATTATAAATAAGTCTGCTATGA  550

seq1  ACATAGTGGAGCAT  564
      ||||||||||||||
seq2  ACATAGTGGAGCAT  564