BAC Information

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BAC

Clone NameB6Ng01-115N08
ChromosomeX (Build37)X (Build37)
Map Location 148,863,601 - 148,864,151148,807,403 - 148,808,336
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneORF34, LOC100039760, Phf8, LOC385448, LOC237116, Huwe1, LOC675514, Hsd17b10, Ribc1, Smc1a, LOC100040394, Iqsec2, Jarid1c, 2900056M20Rik, Tspyl2, Gpr173
Downstream geneLOC207318, EG667113, EG635412, LOC635396, EG667130, Shroom2, Gpr143, LOC100039874, LOC667147, EG624124, Usp51, LOC635253, Mageh1, EG385454, EG436240, Rragb, Klf8, LOC100039932, EG635136
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115N08.bB6Ng01-115N08.g
ACCDH920996DH920997
length550941
definitionDH920996|Mus musculus domesticus DNA, BAC clone: B6Ng01-115N08, 5' end.DH920997|Mus musculus domesticus DNA, BAC clone: B6Ng01-115N08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(148,863,601 - 148,864,151)(148,807,403 - 148,808,336)
sequence
gaattcctttagttcagtacttggtggcatgaagaggctgttaatcaaat
ggctcccagatgtccctcaataaaggaatggatacagaaaatgtggtaca
tttacacaatggggcacacttagctattaaacacaatgaatttatgaaat
tcttaggcaagtggatggaactagaaaatatcatcctgagtgagaaaacc
caatcacaaaagaacacacatggtatacactcactgataagtggatatta
gcccagaagctggtaatacccaagatacaattcacagaccacatgaaact
caagaagaaggaagaccaagtgtgggtgcttcggtccttcttagaaggag
aacaaaatactcacaggagcaaatactgagatgaagagttgagcatagac
tgatgaaaggtcacccagagactgtcccacctgggtatttaccccatata
cagttcccaaaccaagacactattgtggatgccaacaagtgcatgctcac
aggagcttgatatagctgtctcctgagaggctctaccagtgcctgacaaa

gaattctcaaaaacaaagaaaaataaaaagttatatactttaagcatact
aattttttgtatatcagttataaaaataaaggtgtatgataaatagaaga
gaaagacatgagaaaaataagcatgcaaatattgtaatatgcaaatatta
cagatatgaccgtatagaaaattgaaatgtatttaaaactatcagaatta
gaaaatttatcatggttatgagatagggctaatataaaaagtaggtcttt
ctcctttttaaatgctctcaataatgaattagaaaaacgaagaagacatt
attaaaagatcttttattctttgaggatttcatatacatatacaatgaaa
tatgaccacagtgaacccctcccaactgtttccctccaattctccctgca
tcccacccaacacctctccctagcaatgttagatgttctagcaatctaaa
tgggaagtgttccaaataggcttaggtacttgaacatttggttcccctgt
tggtggctctgttttgggagattgggtgatacaaccttgctggaggaggg
atgtcactggagatgagctttgagatgaaaagtctcttgccgttatcagt
tcttctgtttaactgttttgtttgttttttttttttttttttttgtattt
ttttttcgagacagggtttctctgtatagccctggctgtcctggaactct
ctctgtagaccaggttgtcctcgaactttgagttcggcttgcttctccct
cccaagtgctgggattaaaggcaggcgccaccactgcctggcccgttttc
agttctttatctctgcttcattgttatgattcaaggtgtgagctctcagc
ttcctgcttctgccactctgtctgctctttgccatcatacctctacctta
tcattatggactcttgtatctctggaactataagtcaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_148863601_148864151
seq2: B6Ng01-115N08.b_45_594

seq1  GAATTCCTTCAGTTCAGTACTTGGTGGCATGAAGAGGCTGTTAATCAAAT  50
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTAGTTCAGTACTTGGTGGCATGAAGAGGCTGTTAATCAAAT  50

seq1  GGCTCCCAGATGTCCCTCAATAAAGGAATGGATACAGAAAATGTGGTA-G  99
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  GGCTCCCAGATGTCCCTCAATAAAGGAATGGATACAGAAAATGTGGTACA  100

seq1  TTTACACAATGGGGCACCACTTAGCTATTAAACACAATGAATTTATGAAA  149
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTTACACAATGGGGCA-CACTTAGCTATTAAACACAATGAATTTATGAAA  149

seq1  TTCTTAGGCAAGTGGATGGAACTAGAAAATATCATCCTGAGTGAGAAAAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGGCAAGTGGATGGAACTAGAAAATATCATCCTGAGTGAGAAAAC  199

seq1  CCAATCACAAAAGAACACACATGGTATACACTCACTGATAAGTGGATATT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCACAAAAGAACACACATGGTATACACTCACTGATAAGTGGATATT  249

seq1  AGCCCAGAAGCTGGTGATACCCAAGATACAATTCATAGACCACATGAAAC  299
      ||||||||||||||| ||||||||||||||||||| ||||||||||||||
seq2  AGCCCAGAAGCTGGTAATACCCAAGATACAATTCACAGACCACATGAAAC  299

seq1  TCAAGAAGAAGGAAAACCAAAGTGTGGGTGCTTCGGTCCTTCTTAGAAGG  349
      |||||||||||||| ||| |||||||||||||||||||||||||||||||
seq2  TCAAGAAGAAGGAAGACC-AAGTGTGGGTGCTTCGGTCCTTCTTAGAAGG  348

seq1  AGAACAAAATACTCACAGGAGCAAATACTGAGATGAAGAGTTGAGCATAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAAATACTCACAGGAGCAAATACTGAGATGAAGAGTTGAGCATAG  398

seq1  ACTGATGAAAGGTCACCCAGAGACTGTCCCACCTGGGTATTTACCCCATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGAAAGGTCACCCAGAGACTGTCCCACCTGGGTATTTACCCCATA  448

seq1  TACAGTTCACAAACCAAGACACTATTGTGGATGCCAACAAGTGCATGCTC  499
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTCCCAAACCAAGACACTATTGTGGATGCCAACAAGTGCATGCTC  498

seq1  ACAGGAGCTTGATATAGCTGTCTCCTGAGAGGCTCTACCAGTGCCTGACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGCTTGATATAGCTGTCTCCTGAGAGGCTCTACCAGTGCCTGACA  548

seq1  AA  551
      ||
seq2  AA  550

seq1: chrX_148807403_148808336
seq2: B6Ng01-115N08.g_67_1000

seq1  GAATTCTCAAAAACAAAGAAAAATAAAAAGTTATATACTTTAAGCATACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAAAACAAAGAAAAATAAAAAGTTATATACTTTAAGCATACT  50

seq1  AATTTTTTGTATATCAGTTATAAAAATAAAGGTGTATGATAAATAGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTGTATATCAGTTATAAAAATAAAGGTGTATGATAAATAGAAGA  100

seq1  GAAAGACATGAGAAAAATAAGCATGCAAATATTGTAATATGCAAATATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACATGAGAAAAATAAGCATGCAAATATTGTAATATGCAAATATTA  150

seq1  CAGATATGACCGTATAGAAAATTGAAATGTATTTAAAACTATCAGAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATGACCGTATAGAAAATTGAAATGTATTTAAAACTATCAGAATTA  200

seq1  GAAAATTTATCATGGTTATGAGATAGGGCTAATATAAAAAGTAGGTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTTATCATGGTTATGAGATAGGGCTAATATAAAAAGTAGGTCTTT  250

seq1  CTCCTTTTTAAATGCTCTCAATAATGAATTAGAAAAACGAAGAAGACATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTTTAAATGCTCTCAATAATGAATTAGAAAAACGAAGAAGACATT  300

seq1  ATTAAAAGATCTTTTATTCTTTGAGGATTTCATATACATATACAATGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAGATCTTTTATTCTTTGAGGATTTCATATACATATACAATGAAA  350

seq1  TATGACCACAGTGAACCCCTCCCAACTGTTTCCCTCCAATTCTCCCTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACCACAGTGAACCCCTCCCAACTGTTTCCCTCCAATTCTCCCTGCA  400

seq1  TCCCACCCAACACCTCTCCCTAGCAATGTTAGATGTTCTAGCAATCTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCCAACACCTCTCCCTAGCAATGTTAGATGTTCTAGCAATCTAAA  450

seq1  TGGGAAGTGTTCCAAATAGGCTTAGGTACTTGAACATTTGGTTCCCCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGTGTTCCAAATAGGCTTAGGTACTTGAACATTTGGTTCCCCTGT  500

seq1  TGGTGGCTCTGTTTTGGGAGATTGGGTGATACAACCTTGCTGGAGGAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCTCTGTTTTGGGAGATTGGGTGATACAACCTTGCTGGAGGAGGG  550

seq1  ATGTCACTGGAGATGAGCTTTGAGATGAAAAGTCTCTTGCCGTTATCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACTGGAGATGAGCTTTGAGATGAAAAGTCTCTTGCCGTTATCAGT  600

seq1  TCTTCTGTTTAACTGTTTTGTTTGTTTTTTTTTTTTTTTTTTTTGTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGTTTAACTGTTTTGTTTGTTTTTTTTTTTTTTTTTTTTGTATTT  650

seq1  TTTTTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCT  700

seq1  CTCTGTAGACCAGGTTGTCCTCGAACTTTGAGTTCGGCTTGCTTCTCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTAGACCAGGTTGTCCTCGAACTTTGAGTTCGGCTTGCTTCTCCCT  750

seq1  CCCAAGTGCTGGGATTAAAGGCAGGCGCCACCACTGCCTGGCCCGTTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTGCTGGGATTAAAGGCAGGCGCCACCACTGCCTGGCCCGTTTTC  800

seq1  AGTTCTTTATCTCTGCTTCATTGTTATGATTCAAGGTGTGAGCTCTCAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTATCTCTGCTTCATTGTTATGATTCAAGGTGTGAGCTCTCAGC  850

seq1  TTCCTGCTTCTGCCACTCTGTCTGCTCTTTGCCATCATACCTCTACCTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCTTCTGCCACTCTGTCTGCTCTTTGCCATCATACCTCTACCTTA  900

seq1  TCATTATGGACTCTTGTATCTCTGGAACTATAAG  934
      ||||||||||||||||||||||||||||||||||
seq2  TCATTATGGACTCTTGTATCTCTGGAACTATAAG  934