BAC Information

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BAC

Clone NameB6Ng01-116L08
ChromosomeX (Build37)
Map Location 45,920,900 - 45,921,986
singlet/doubletsinglet
Overlap geneSuhw3
Upstream geneLOC100040133, LOC100040145, EG624187, Smarca1, LOC676253, Ocrl, LOC270596, LOC665672, Apln, Xpnpep2, 1200013B08Rik, Zdhhc9, Utp14a, LOC637576, Bcorl1, Elf4, Aifm1, Rab33a
Downstream geneSlc25a14, Gpr119, Rbmx2, LOC665752, Gm595, EG637758, LOC100040295, Enox2, 1100001E04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116L08.bB6Ng01-116L08.g
ACCDH921639DH921640
length1,2321,082
definitionDH921639|Mus musculus domesticus DNA, BAC clone: B6Ng01-116L08, 5' end.DH921640|Mus musculus domesticus DNA, BAC clone: B6Ng01-116L08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccagaccttcaaagaagacctgataccaattttcctcaaact
attccataaaatagaaacagaaggagctgacagaaaactaaccagtacaa
cttctcttcataagtttccctcactaccttcctcattttgcagtaaaaac
cttttcccccaaaagttttgaaaatacaacttattttattgtatttttat
ctatactacctaactcattctatgaagccacaattactctgatacctaaa
ccacacaaggatccaacccaaaaaaaaaaaaaagagagagagagaacgtc
agaccaatcaatctcacttatgaatatcgatgcaaaaatactcaatataa
tttttgcaaaccaaatccaagaacacatcaaaaccatctttcgccatgat
caagtaggcttcatcccagggatgcaaggttggtttaatatatgaaaatc
cattaacataatccactatataaacaaactcaaagaaaaaaatctcatga
tcatctccttagatgctgaaaaggtatttggcaaaatacaacaccccttc
atgttaaaagtattggagagatcaggaattcaagtcccatgcataaacat
aataacaacaatttactgcaaaccaacagtcaatatcaaattaaatggag
acatacttgaagcaatcccactgaaatcaggaacaagacaaggatgtcga
ctctctccatatctattcaatatagtattcgaagtgttagctagaacaat
agacaacaaaaagaaatcaaggggatacaaattggtaaagaagaaataaa
ggtatcactatttacagatgatatgttagcatacatgagtaaccccaaaa
attctactagagaacttctccagctgataaacaacttcagcaaagtggcc
ggagataaaattaactcaaataaatcaagatatatcctttattcaaagga
taaacaggctgaggaagaaattagggaaacaactcccttcaaaatagcca
caaataatataaatatcttgggtactctacccaacagtgaaagactatat
ggcatacttcaagtctctcaagaaaattgagagatctcagaaaatggaga
gatctccatgctctgatgccaataactagtagaattgcatctacaagtaa
tcttgagtcatgcaatcccatcaatgaccaatctcagactgaagaggcaa
ttctcattcactggaaatcgcgacgacccaac
gaattctttaaaagtgttttaaaaatcttgatatctaataaaaattgaat
ttggtcttctcacaactaataatccgacaaatggtttatttggttgtccc
ttatgtaggtaggggaaacaaaagtaattcactcattcagaatttccaca
gtggccttccaattattatgctctgagttaattaaatataatgggcaatt
cagacaaagcctttccttttatggtttttttttgtgtgtgattttctttc
ttttttttctatttattacgtattttcctcaattacatttccaatgctat
cccaaaagttccctataccctcccccccgactcccctacccacccattcc
cattttttggccctggcgttcccctgtactggggcatataaagtttgcct
gtccaataggcatctctttccagtgatggccgactaggccatcttttgat
acatatgcagctagagtcaagagctccggggtactggttagtacataatg
ttgcacctacagggttgcagatctctttagctccttggatactttctcta
gctcctccattgggggccgtgtgacccatccaatagctgactgtgagcat
ccacttctgtgtttgctaggccccggcatagtcttacaagagacagctat
atcacggtccttgcaacaaacgcttgctagggtatgcaatggtgtcatcg
tttggaggctaattatgggatggatccctggatatggcagtctctagatg
gtccatccttttgtctcagctccaaactttgtctctgtaactccttccat
gggtgattgtttccaattctaaagaaggggcaaagtgtccacactttggt
cttcgttcttcttcagtttcatgtgttttgcaaattgtatcttatatctc
gggtatactaagtttctgggctaatatccacctatcagtgagtacatatc
atgtgagttcttttgtgtcctttatgtttatatgactttgtagtttgaaa
attgaaagtatgtgtaagttgtatgggtgagtacatacatacggggtaat
cttggaggagctagaggacaaccctttagagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_45920900_45921986
seq2: B6Ng01-116L08.g_69_1149

seq1  GAATTCTTTAAAAGTGTTTTAAAAATCTTGATATCTAATAAAAATTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAAAGTGTTTTAAAAATCTTGATATCTAATAAAAATTGAAT  50

seq1  TTGGTCTTCTCACAACTAATAATCCGACAAATGGTTTATTTGGTTGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTTCTCACAACTAATAATCCGACAAATGGTTTATTTGGTTGTCCC  100

seq1  TTATGTAGGTAGGGGAAACAAAAGTAATTCACTCATTCAGAATTTCCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAGGTAGGGGAAACAAAAGTAATTCACTCATTCAGAATTTCCACA  150

seq1  GTGGCCTTCCAATTATTATGCTCTGAGTTAATTAAATATAATGGGCAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCTTCCAATTATTATGCTCTGAGTTAATTAAATATAATGGGCAATT  200

seq1  CAGACAAAGCCTTTCCTTTTATGGTTTTTTTTTGTGTGTGATTTTCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAAAGCCTTTCCTTTTATGGTTTTTTTTTGTGTGTGATTTTCTTTC  250

seq1  TTTTTTTTCTATTTATTACGTATTTTCCTCAATTACATTTCCAATGCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCTATTTATTACGTATTTTCCTCAATTACATTTCCAATGCTAT  300

seq1  CCCAAAAGTTCCCTATACCCTCCCCCCCGACTCCCCTACCCACCCATTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAAGTTCCCTATACCCTCCCCCCCGACTCCCCTACCCACCCATTCC  350

seq1  CATTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCCT  400

seq1  GTCCAATAGGCATCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAATAGGCATCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGAT  450

seq1  ACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTACATAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTACATAATG  500

seq1  TTGCACCTACAGGGTTGCAGATCTCTTTAGCTCCTTGGATACTTTCTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACCTACAGGGTTGCAGATCTCTTTAGCTCCTTGGATACTTTCTCTA  550

seq1  GCTCCTCCATTGGGGGCCGTGTGACCCATCCAATAGCTGACTGTGAGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCCATTGGGGGCCGTGTGACCCATCCAATAGCTGACTGTGAGCAT  600

seq1  CCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTTACAAGAGACAGCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTTACAAGAGACAGCTAT  650

seq1  ATCACGGTCCTTGCAACAAACGCTTGCTAGGGTATGCAATGGTGTCATCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACGGTCCTTGCAACAAACGCTTGCTAGGGTATGCAATGGTGTCATCG  700

seq1  TTTGGAGGCTAATTATGGGATGGATCCCTGGATATGGCAGTCTCTAGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGGCTAATTATGGGATGGATCCCTGGATATGGCAGTCTCTAGATG  750

seq1  GTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAT  800

seq1  GGGTGATTGTTTCCAATTCT-AAGAAGGGGCAAAGTGTCCACACTTTGGT  849
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GGGTGATTGTTTCCAATTCTAAAGAAGGGGCAAAGTGTCCACACTTTGGT  850

seq1  CTTCGTTCTTCTTCAGTTTCATGTGTTTTGCAAATTGTATCTTATATCTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGTTCTTCTTCAGTTTCATGTGTTTTGCAAATTGTATCTTATATCTC  900

seq1  GGGTATACTAAGTTTCTGGGCTAATATCCACTTATCAGTGAGTACATATC  949
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GGGTATACTAAGTTTCTGGGCTAATATCCACCTATCAGTGAGTACATATC  950

seq1  ATGTGAGTTCTTTTGTGTCCTTTTATGTTTTATATGACTTTTGTAGTTTG  999
      |||||||||||||||||||| |||||| |||||||||| |||||||||||
seq2  ATGTGAGTTCTTTTGTGTCC-TTTATG-TTTATATGAC-TTTGTAGTTTG  997

seq1  AAAAATTGTAAAGTATGTGTAAGTATGTATGTGTGAGTACATACATACCG  1049
       ||||||| ||||||||||||||| |||||| ||||||||||||||| ||
seq2  -AAAATTG-AAAGTATGTGTAAGT-TGTATGGGTGAGTACATACATA-CG  1043

seq1  TGGTATACTTGTA-GAGCTCAGAGGACAACCCTTTAGAG  1087
       ||||  |||| | ||||| |||||||||||||||||||
seq2  GGGTAATCTTGGAGGAGCT-AGAGGACAACCCTTTAGAG  1081