BAC Information

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BAC

Clone NameB6Ng01-117D13
ChromosomeX (Build37)
Map Location 127,344,648 - 127,439,933
singlet/doubletdoublet
Overlap genenone
Upstream geneDiap2, LOC100040092, LOC665773
Downstream geneLOC665799, LOC670449, LOC245600
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117D13.bB6Ng01-117D13.g
ACCDH922018DH922019
length1861,187
definitionDH922018|Mus musculus domesticus DNA, BAC clone: B6Ng01-117D13, 5' end.DH922019|Mus musculus domesticus DNA, BAC clone: B6Ng01-117D13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,344,648 - 127,344,833)(127,438,730 - 127,439,933)
sequence
tgtctgttgtcctagaagtaaagtactaagagctcagcaatggcaaccca
gtgactttcagaaaaacaaaagggttagttagcagcctaataaaaacatt
gtgtgtgtgtttgcacatgcatagacatgaaaatttacactctctccatg
ctatggttgtttccttccttccttccttccttcctt
gaattcaattagaagccaatagcaataaaaatagcaaaattgaagaagaa
aattgtggtgactatactaaattatatgattcattacagagcagtaatgc
ttaagtgttatatgaattaaaggaaaaggatagaaactgagcaatggaat
caaacaaaaaataagttatatatagtattaatattttctcaacaagattg
tcaaggcactccaatggtggggagaaaaatcatttcaccaaattttcctg
gaatacctgcaaatagaaaaatatgaatattatcaattacaaggaaaaat
ttagtaaaataagccaaagccctaactattaaatactgaaagtagaaaat
gtgatgcatgcatatgatacactactacatagccataaaaaggatcaaag
ttattttatttttaggaaagtgagtgagcctggaagacatcatgttaccc
tttataattaatatgtgttagtacttataataaaaggattttctaagtta
aagatagtagttcagtacatcctttagaataaaacatttagaataaagaa
aatgttttgagtttagtctctataaaatgtttttgaaaaacaacaagtag
caataattgcaaaaatttattagcattatccaaatgaaagtattgttctt
taaagcaaacctttaataaagtaaaaactgtaagccacagagaaaaacat
attacagtattaagtagataccaggttctaaaaagtaacttcataatata
aaaaccttctttacaaaacagaaaaatatgatttttaaccaaaataaata
ttatggtacaaatgactaatcacatgaggaaatgctcaacatcacagtca
ttaggaaaacacaaattatgctatatggtttaatattagttcatattaaa
atgactcatacaaaataaaataaaaatgtcaacactttcaaatgttagtg
atgtggtataactgggattctcactgatagcagggatgtaattttcttgg
gaaagcagtagcactacttatgatcttacatcatatttatttttaataac
aaataggtgatcaacatattattcttagtattacccaggagaaatgcaaa
caatttatagaaccctacttatggtgataacggtgattttattggtaaaa
aatatgttgagactgtttgttctttaggagtcaataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_127344648_127344833
seq2: B6Ng01-117D13.b_51_236

seq1  TGTCTGTTGTCCTAGAAGTAAAGTACTAAGAGCTCAGCAATGGCAACCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTGTCCTAGAAGTAAAGTACTAAGAGCTCAGCAATGGCAACCCA  50

seq1  GTGACTTTCAGAAAAACAAAAGGGTTAGTTAGCAGCCTAATAAAAACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTTTCAGAAAAACAAAAGGGTTAGTTAGCAGCCTAATAAAAACATT  100

seq1  GTGTGTGTGTTTGCACATGCATAGACATGAAAATTTACACTCTCTCCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTTTGCACATGCATAGACATGAAAATTTACACTCTCTCCATG  150

seq1  CTATGGTTGTTTCCTTCCTTCCTTCCTTCCTTCCTT  186
      ||||||||||||||||||||||||||||||||||||
seq2  CTATGGTTGTTTCCTTCCTTCCTTCCTTCCTTCCTT  186

seq1: chrX_127438730_127439933
seq2: B6Ng01-117D13.g_67_1253 (reverse)

seq1  TTATTGACTCACTAAAGAACAAACATTGTCTCAACATATTTTTTTTTACA  50
      |||||||||| ||||||||||||||  |||||||||||   |||||||| 
seq2  TTATTGACTC-CTAAAGAACAAACA--GTCTCAACATA---TTTTTTACC  44

seq1  AATAAATACACGTATTATCATCATAGGTAGGGTTCTATAAATATGTTTTT  100
      ||||||  |||   |||||| |||| ||||||||||||||||   | |||
seq2  AATAAAATCAC-CGTTATCACCATAAGTAGGGTTCTATAAAT---TGTTT  90

seq1  GCATTTCTCTTGGGTAATTACTTAAGAATAATATGTTTGAATCA-CTATG  149
      ||||||||| ||||||| ||| |||||||||||||||   |||| |||| 
seq2  GCATTTCTCCTGGGTAA-TAC-TAAGAATAATATGTT--GATCACCTATT  136

seq1  TGTGTATTTAAAAATAAATATGATGT-AGATCATAAGTAGGTGCTACTGC  198
      ||| || ||||||||||||||||||| |||||||||||| ||||||||||
seq2  TGT-TA-TTAAAAATAAATATGATGTAAGATCATAAGTA-GTGCTACTGC  183

seq1  TTTCCCAAGACATTTTACATTCCTGCTATCAGTGAGAATTCCAGTTATAC  248
      |||||||||| |  |||||| |||||||||||||||||| ||||||||||
seq2  TTTCCCAAGA-AAATTACATCCCTGCTATCAGTGAGAATCCCAGTTATAC  232

seq1  CACATCACTAACATTTGGAAGTGTTGACATTTTTATTTTATTTTGTATGA  298
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CACATCACTAACATTTGAAAGTGTTGACATTTTTATTTTATTTTGTATGA  282

seq1  GTCATTTTAATATGAACTAATATTAAACCATTATAGCATAATTTGTGTTT  348
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTCATTTTAATATGAACTAATATTAAACCA-TATAGCATAATTTGTGTTT  331

seq1  TCCTAATGACTGTGATGTTGAGCATTTCCTCATGTGATTAGTCATTTGTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATGACTGTGATGTTGAGCATTTCCTCATGTGATTAGTCATTTGTA  381

seq1  CCATAATATTTATTTTGGTTAAAAATCATATTTTTCTGTTTTGTAAAGAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAATATTTATTTTGGTTAAAAATCATATTTTTCTGTTTTGTAAAGAA  431

seq1  GGTTTTTATATTATGAAGTTACTTTTTAGAACCTGGTATCTACTTAATAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTATATTATGAAGTTACTTTTTAGAACCTGGTATCTACTTAATAC  481

seq1  TGTAATATGTTTTTCTCTGTGGCTTACAGTTTTTACTTTATTAAAGGTTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATATGTTTTTCTCTGTGGCTTACAGTTTTTACTTTATTAAAGGTTT  531

seq1  GCTTTAAAGAACAATACTTTCATTTGGATAATGCTAATAAATTTTTGCAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAAAGAACAATACTTTCATTTGGATAATGCTAATAAATTTTTGCAA  581

seq1  TTATTGCTACTTGTTGTTTTTCAAAAACATTTTATAGAGACTAAACTCAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCTACTTGTTGTTTTTCAAAAACATTTTATAGAGACTAAACTCAA  631

seq1  AACATTTTCTTTATTCTAAATGTTTTATTCTAAAGGATGTACTGAACTAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTCTTTATTCTAAATGTTTTATTCTAAAGGATGTACTGAACTAC  681

seq1  TATCTTTAACTTAGAAAATCCTTTTATTATAAGTACTAACACATATTAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTAACTTAGAAAATCCTTTTATTATAAGTACTAACACATATTAAT  731

seq1  TATAAAGGGTAACATGATGTCTTCCAGGCTCACTCACTTTCCTAAAAATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGGGTAACATGATGTCTTCCAGGCTCACTCACTTTCCTAAAAATA  781

seq1  AAATAACTTTGATCCTTTTTATGGCTATGTAGTAGTGTATCATATGCATG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACTTTGATCCTTTTTATGGCTATGTAGTAGTGTATCATATGCATG  831

seq1  CATCACATTTTCTACTTTCAGTATTTAATAGTTAGGGCTTTGGCTTATTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACATTTTCTACTTTCAGTATTTAATAGTTAGGGCTTTGGCTTATTT  881

seq1  TACTAAATTTTTCCTTGTAATTGATAATATTCATATTTTTCTATTTGCAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAATTTTTCCTTGTAATTGATAATATTCATATTTTTCTATTTGCAG  931

seq1  GTATTCCAGGAAAATTTGGTGAAATGATTTTTCTCCCCACCATTGGAGTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCCAGGAAAATTTGGTGAAATGATTTTTCTCCCCACCATTGGAGTG  981

seq1  CCTTGACAATCTTGTTGAGAAAATATTAATACTATATATAACTTATTTTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGACAATCTTGTTGAGAAAATATTAATACTATATATAACTTATTTTT  1031

seq1  TGTTTGATTCCATTGCTCAGTTTCTATCCTTTTCCTTTAATTCATATAAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGATTCCATTGCTCAGTTTCTATCCTTTTCCTTTAATTCATATAAC  1081

seq1  ACTTAAGCATTACTGCTCTGTAATGAATCATATAATTTAGTATAGTCACC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGCATTACTGCTCTGTAATGAATCATATAATTTAGTATAGTCACC  1131

seq1  ACAATTTTCTTCTTCAATTTTGCTATTTTTATTGCTATTGGCTTCTAATT  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTTCTTCTTCAATTTTGCTATTTTTATTGCTATTGGCTTCTAATT  1181

seq1  GAATTC  1204
      ||||||
seq2  GAATTC  1187