BAC Information

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BAC

Clone NameB6Ng01-122A21
ChromosomeX (Build37)
Map Location 120,373,571 - 120,374,574
singlet/doubletsinglet
Overlap genenone
Upstream geneNap1l3, 3110007F17Rik
Downstream geneLOC100039751, LOC100039763, LOC665281, EG625591, LOC665325, EG382265, LOC665364, EG546368, LOC100038940, LOC100038941, EG625699, LOC100038942
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122A21.bB6Ng01-122A21.g
ACCDH925582DH925583
length1,251984
definitionDH925582|Mus musculus domesticus DNA, BAC clone: B6Ng01-122A21, 5' end.DH925583|Mus musculus domesticus DNA, BAC clone: B6Ng01-122A21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacataaaaccaaagacactgaaacttataaaggagacagtgtg
gaaatgccttgaagatatgggaactaggataaaaaaatcctgaacagaat
atcaatggtttgtgttgtaatatcgagaatcaacaaatgggacctcataa
aattgcaaagcttctgtaaggcaaaagacactagtcaataagacaaaaag
gccaccaacagattgggaaatgatttttaccaatcctaaatcagatgggg
gactaatatccaatatatacaaagaactcaagaaactggactccagaaaa
tcatataaccctagtaaaaaatggggtacagagccaaataaagaattctc
aactgaggaatactgaattgctgagaagcacctgaaaaaatgttcaacat
ccttaatcatcagggaaatgcaaatcaaaacaaccctgagattcctcctc
acaccagtcagaatggctaagttcaaaaattcaggtgacagcagatgctg
gcgaggatgtggagaaagaggaacattcctccattgttggtgagattgta
atctggtaaaaccactctggaaatcgtcctggtggttcctcagaaaattg
gacatggacaggaagatccagcaatacctatcctgggcatatactcagta
gatgttccaacttgtaataagggcacatgctctactatgttcataacagc
cttatttataatagctagaagctggaaagaaccccgatgtccctcaacag
aggaatggacacagaaaatgtggtgatttacacaatggagtactactcag
ctattaaaaacaatgaattagtgaaattcttaggcaaatggatggtatct
gaaggataccatcctgagtgagataacccaatcacaaaagaactcacatg
atatgcactcactgataagtggatattagcccagaaactttaatacccaa
gatacaatttgcaaaacacttgaaactcagagaggaagataaaagtgtgg
ataatttgttcttttcttagaatggggatcaaaatacccatggaagagtt
acagagaacaaagttccgagctgaaacagaagagacatccaagactgcct
taccagggtatcattccatagcacaccaaacactgacactttgtatctcc
cagccaagatttgctcgtcaggacatgacatagcctttccttagaggcta
tgttcaggtcttgtcaaatttcaggaggttgagatgtatatcacaagttt
c
gaattcatgcagttgaatccttcttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcgc
cagtcccgagttttttctcgtcccggaattcggcaccaattgttattaga
cgcgttctcacgaccggccaggaaagacgcaacaaaccagaatcttctgc
ggcaaagctttattgcttacatcttcaggagccagagtgcaagaagcaag
agagcaagaagcaagagagagagaaaacgaaaccccgtccctattttagg
agagttatccctcgcctaggacgtgtcactccctgattggctgcagccca
tcggccgagttgacgtcacggggaaggcagagcacatggagtgaagaacc
accctcggcacatgcgcagattatttgtttaccacttagaacacagctgt
cagcgccatcttgtaacggcgaatgtgggcgcggctcccaacaggtatgt
atagattacatgtggatttattctctacaataactaggtatgtatagatt
atatatgattcatttgttctatatagtaaccaggcatgtatgtgtaaata
catggcataggtgacactgtacagattacacatggatttttgctacatat
taactaggtgtgtacagattacatgtggagttattctatatattaactag
gcatgtatagattaaatatggatttttactatataatgactatgtatgta
cgtggaaatacaggccataggaaaggccccatgtctctctgcctgataca
gccacgcaaggactggagtgtgcagctcagtggttgaaatatggtggaca
ttattattatattatattatattattattaaagtctaaaaaatttaaaaa
gtttaaaaagtttaaattttaaaaagcagacactaaaacacactaaaaaa
ttctaaatcctaaaaaaaaagcctaactctgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_120373571_120374574
seq2: B6Ng01-122A21.g_63_1046

seq1  GAATTCATGCAGTTGAATCCTTCTTAACAGTCTGCTTTACGGGAACCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCAGTTGAATCCTTCTTAACAGTCTGCTTTACGGGAACCTTT  50

seq1  ATTACCGCGACCCGCAGTTCTGGTTCTGGAATGAGGGATCTTCCTTGCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCGCGACCCGCAGTTCTGGTTCTGGAATGAGGGATCTTCCTTGCGC  100

seq1  CAGTCCCGAGTTTTTTCTCGTCCCGGAATTCGGCACCAATTGTTATTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCCGAGTTTTTTCTCGTCCCGGAATTCGGCACCAATTGTTATTAGA  150

seq1  CGCGTTCTCACGACCGGCCAGGAAAGACGCAACAAACCAGAATCTTCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGTTCTCACGACCGGCCAGGAAAGACGCAACAAACCAGAATCTTCTGC  200

seq1  GGCAAAGCTTTATTGCTTACATCTTCAGGAGCCAGAGTGCAAGAAGCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGCTTTATTGCTTACATCTTCAGGAGCCAGAGTGCAAGAAGCAAG  250

seq1  AGAGCAAGAAGCAAGAGAGAGAGAAAACGAAACCCCGTCCCTATTTTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAGAAGCAAGAGAGAGAGAAAACGAAACCCCGTCCCTATTTTAGG  300

seq1  AGAGTTATCCCTCGCCTAGGACGTGTCACTCCCTGATTGGCTGCAGCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTATCCCTCGCCTAGGACGTGTCACTCCCTGATTGGCTGCAGCCCA  350

seq1  TCGGCCGAGTTGACGTCACGGGGAAGGCAGAGCACATGGAGTGAAGAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCCGAGTTGACGTCACGGGGAAGGCAGAGCACATGGAGTGAAGAACC  400

seq1  ACCCTCGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACAGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACAGCTGT  450

seq1  CAGCGCCATCTTGTAACGGCGAATGTGGGCGCGGCTCCCAACAGGTATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGCCATCTTGTAACGGCGAATGTGGGCGCGGCTCCCAACAGGTATGT  500

seq1  ATAGATTACATGTGGATTTATTCTCTACAATAACTAGGTATGTATAGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTACATGTGGATTTATTCTCTACAATAACTAGGTATGTATAGATT  550

seq1  ATATATGATTCATTTGTTCTATATAGTAACCAGGCATGTATGTGTAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGATTCATTTGTTCTATATAGTAACCAGGCATGTATGTGTAAATA  600

seq1  CATGGCATAGGTGACACTGTACAGATTACACATGGATTTTTGCTACATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCATAGGTGACACTGTACAGATTACACATGGATTTTTGCTACATAT  650

seq1  TAACTAGGTGTGTACAGATTACATGTGGAGTTATTCTATATATTAACTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAGGTGTGTACAGATTACATGTGGAGTTATTCTATATATTAACTAG  700

seq1  GCATGTATAGATTAAATATGGATTTTTACTATATAATGACTATGTATGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTATAGATTAAATATGGATTTTTACTATATAATGACTATGTATGTA  750

seq1  CGTGGAAATACAGGCCATAGG-AAGGCCCCATGTCTCTCTGCCTGATACA  799
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CGTGGAAATACAGGCCATAGGAAAGGCCCCATGTCTCTCTGCCTGATACA  800

seq1  GCCACGCAAGGACTGGAGTGTGCAGCTCAGTGGTTGAAATATGGTGGACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GCCACGCAAGGACTGGAGTGTGCAGCTCAGTGGTTGAAATATGGTGGAC-  849

seq1  ATTATTATTATTATTATTATTATTATTATTATTAAAAGTCTAAAAAAATT  899
      |||||||||| ||||| ||||| |||||||||| ||||||||||||| ||
seq2  ATTATTATTA-TATTA-TATTA-TATTATTATT-AAAGTCTAAAAAATTT  895

seq1  TTAAAAAAAGTTTAAAAAAGTTTAAAATTTTAAAAAAGCAAGAACACTAA  949
          ||||||||| ||||||||||||  ||| ||||||||   ||||| |
seq2  ----AAAAAGTTT-AAAAAGTTTAAA--TTTTAAAAAGCA--GACACT-A  935

seq1  AAACACACTAAAAAAATTCTAAAACCCTAAAAAAAAAAGCCCTAAAACTC  999
      ||||||||| ||||||||||||| ||   ||||||||||||    |||||
seq2  AAACACACT-AAAAAATTCTAAATCC--TAAAAAAAAAGCC---TAACTC  979

seq1  TGAAA  1004
      |||||
seq2  TGAAA  984