BAC Information

Click to search

BAC

Clone NameB6Ng01-123A02
ChromosomeX (Build37)
Map Location 16,153,612 - 16,154,266
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043949, LOC100043950, Cypt6, LOC100038939
Downstream geneLOC668993, Maoa, Maob, Ndph, LOC100043063, Efhc2, Fundc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123A02.bB6Ng01-123A02.g
ACCDH926288DH926289
length1,012714
definitionDH926288|Mus musculus domesticus DNA, BAC clone: B6Ng01-123A02, 5' end.DH926289|Mus musculus domesticus DNA, BAC clone: B6Ng01-123A02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccatgttgttctctgtcctctccaagggcactaatggcatgta
caatcatacccatatgcatatatatatatatatatataaacacagacata
gtaaatgaaatttttaagtaaaaataaataaaataatcaaaagtgatata
ctgtgtgtactggctagttttgtgtcaacttgaaacagctggagttatca
cagagaaaagagcttcagttgacgaaatgtctccatgagatccaactgta
aggcattttctcaattagtgatcaagggggaaaggccccttgtgggtggg
accatctctgggctgatagtcttggttctataagacagcagtctgagcaa
gccagaggaagccagccagtaaggaacatccctccatggtttctgcatca
gttcctgctttctgacctgcttgagttccattccttacgtacttggtgat
gaacagcagtatggaaatgtaagctgaataaaccctttcctccccaactt
gcttcttggtcatgatgtttgtgcaggaatagaaaccctgactaagacaa
attggtaccagcagagtggggtattcctgtgacaacctgaccatgttttg
gggaggactgtggaaggacttttgaactttgggccaaaagatagattccc
tgttaagaactctgtgaggtgttgtgtaggagcttggaagataatgttga
gaacagtgcagaaatggaggcctggcttgtgaaatttcagagggaagatt
aaagacttttcaaggccattgctattttggattgtgaagattctgtggtt
ctggttagctggggtgaagaatcagccgtgattaacaagacaccagaaca
actaaagtaaaacctttgcattactgggattattgatgctggttagctgg
agctaagaaattagcagtcattagagagaccagcatcactgagtgaatct
tctgggaagtgttttctgagagcaaagggttgttttccagagatagccaa
gtgtaccttgtg
gaattcccagagagagctgatctcaaaggattgatggcacacaggcttac
aaaagggataagccacagtcagagacagtaagaccagctaacaccacaga
taacaagataccaagaagcaagagcaagaaacttagtatagcgagatata
aggtacaatatgtaaaacatatgaaactgaagaagaacgaagaccaaagt
gtggacactttgctcattcttagaattggaaacaatcacccatggaagga
gttacagagacaaagtttggagctgagacaaaaggatggtccatctagag
actgccatatccagagatccatcccataattagcctccaagcgatgacac
cattgcatacactagcaagcctttgttgcaaggaccgtgatatagctgtc
ccttgtgagactaggccggggcctagcaaacacagaagtggatgctcaca
gtcaactattggatggatcacagggcccccaacagaggagctagagaaag
tacccaaggagctaaagggatctgcaaccctataggtggatcaacattat
gaactaaccagtaccccagagctcttgactctagctgcatatgtatcaaa
agatggcctatccggccatcactggaaagagaggcccattggacatgcaa
actttatatgccccagtacaggggaacgccagggccaaaaagggggagtg
ggtgggtaggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_16153612_16154266
seq2: B6Ng01-123A02.b_47_701

seq1  GAATTCTCCATGTTGTTCTCTGTCCTCTCCAAGGGCACTAATGGCATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATGTTGTTCTCTGTCCTCTCCAAGGGCACTAATGGCATGTA  50

seq1  CAATCATACCCATATGCATATATATATATATATATATAAACACAGACATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATACCCATATGCATATATATATATATATATATAAACACAGACATA  100

seq1  GTAAATGAAATTTTTAAGTAAAAATAAATAAAATAATCAAAAGTGATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGAAATTTTTAAGTAAAAATAAATAAAATAATCAAAAGTGATATA  150

seq1  CTGTGTGTACTGGCTAGTTTTGTGTCAACTTGAAACAGCTGGAGTTATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTACTGGCTAGTTTTGTGTCAACTTGAAACAGCTGGAGTTATCA  200

seq1  CAGAGAAAAGAGCTTCAGTTGACGAAATGTCTCCATGAGATCCAACTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAAAGAGCTTCAGTTGACGAAATGTCTCCATGAGATCCAACTGTA  250

seq1  AGGCATTTTCTCAATTAGTGATCAAGGGGGAAAGGCCCCTTGTGGGTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTTTCTCAATTAGTGATCAAGGGGGAAAGGCCCCTTGTGGGTGGG  300

seq1  ACCATCTCTGGGCTGATAGTCTTGGTTCTATAAGACAGCAGTCTGAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTCTGGGCTGATAGTCTTGGTTCTATAAGACAGCAGTCTGAGCAA  350

seq1  GCCAGAGGAAGCCAGCCAGTAAGGAACATCCCTCCATGGTTTCTGCATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGGAAGCCAGCCAGTAAGGAACATCCCTCCATGGTTTCTGCATCA  400

seq1  GTTCCTGCTTTCTGACCTGCTTGAGTTCCATTCCTTACGTACTTGGTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTGCTTTCTGACCTGCTTGAGTTCCATTCCTTACGTACTTGGTGAT  450

seq1  GAACAGCAGTATGGAAATGTAAGCTGAATAAACCCTTTCCTCCCCAACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGCAGTATGGAAATGTAAGCTGAATAAACCCTTTCCTCCCCAACTT  500

seq1  GCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAA  550

seq1  ATTGGTACCAGCAGAGTGGGGTATTCCTGTGACAACCTGACCATGTTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTACCAGCAGAGTGGGGTATTCCTGTGACAACCTGACCATGTTTTG  600

seq1  GGGAGGACTGTGGAAGGACTTTTGAACTTTGGGCCAAAAGATAGATTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGACTGTGGAAGGACTTTTGAACTTTGGGCCAAAAGATAGATTCCC  650

seq1  TGTTA  655
      |||||
seq2  TGTTA  655