BAC Information

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BAC

Clone NameB6Ng01-123A05
ChromosomeX (Build37)
Map Location 112,729,622 - 112,730,812
singlet/doubletsinglet
Overlap genenone
Upstream geneEG546361, EG237009, 4930524E20Rik, LOC237008, EG664969, EG546362, LOC100039255, LOC623913, LOC546363
Downstream geneLOC100039277, Cpxcr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123A05.bB6Ng01-123A05.g
ACCDH926294DH926295
length1,171745
definitionDH926294|Mus musculus domesticus DNA, BAC clone: B6Ng01-123A05, 5' end.DH926295|Mus musculus domesticus DNA, BAC clone: B6Ng01-123A05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgttactcatataaaaaataatcatgttaaggatttaatcct
tatataaggctgaagaaacaagataagagtaactaaaatgtttttcagat
tccagaagctagaggtcctgacacaaacctgaaattccaggatagaagaa
gcagaggcagaaagattagcagaaattcaaggccagcctgttttataatc
atagtttcccagacaatcagacacacataggaagattctgccccataaaa
ctaaaaaaaaaaagtaaatagtatttcaaggagttcataatcaatatact
atgatcaacatcatgagattcacagcatccattatcttagcataaggatt
taataattttcacccaagattgcaggaacagtggtgccttgtaggaagaa
caagcaagatgacactgtgatcactagtgggaaaaattatcatagtctat
aaaacaaaacttctcttttccaaaaacaaggaagcacatcatgacatgaa
ctgttgtctcaaatcttggtgacttctatagcacctttgagaactagaca
taggataatgattagcattataataatttcaagaatgcctgaacatgata
cctcttgtcctgtgtcccaatttgatgataagctgaggtcattgtaatat
gctaagtctttctaacatagcaataattaaattaatttctacatttcact
attactgatttccttatgtttgttggaattccttaatattagacatattt
ttgaccaagaatttggaaatagttttattaaatatgcttatgacttttga
tgttttcagtttatgatgactttggaaagatatgcacttgtcatatatca
atgagaacctgtaattgatgaggaaaaggaggtccagtgacagacccata
ttgggatctagctcaaggggagttcccagggtctgacactattcctgatg
gtatggtatacttacagaggcctatgatgactgccctccaaaaggcttaa
caagtagctgaaaattcagatgctgatatttacaccaaacaatggacaga
agctgggacccctgtgtgaataggtaaagtcgagaattgagaggattggt
gacccccagaagacatcagtctcaactatctggaccactgagaattcgga
cctggacaccaacgaaccata
gaattcatttacctgttttattgggttttcctgcatttctttaagagatt
tgtttcttctttaaaggcttctacttgtttacctgtgttcttctatatct
ctttgagttatttatgtccttaaataactctatcatattcatgagatgag
attttagattgtaatcttgcttttcaggtgtgttatgagtccaagacttg
gtgtggttggatgttgacaagtagcattggtttctgtttcttttgttttt
gtgcttacctctggccatctggttatctctagtgctaaatgtccttcctg
tctctaactgaatcctgtccctcctgtgatgctgattgtttcctgtgatt
caagctgcctctggaatccggaaaccttggtgtgaccaagctcctgagag
cctgttgcatcagagctcctgggagtcaagctttctctgagtgttacaga
tgtgggtggagagccagagccctggatctgccccaggaacaagtgcaagc
tggaaggaatctgtggctttggatgggcagaggtttgtgtttctctggtt
ccagtgagggtcccagttatcctgggtgttgggaaggatgttatggcctc
aactgtgttcttgagcatgtcaaagctccagtgctcctgggtgtgtctga
cttccagagagtggggcttcctctatcatccctgtgatcctgggcatttc
agagcacctgtgatcctggggcattgtcagagcacatgggagttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_112729622_112730812
seq2: B6Ng01-123A05.b_43_1213 (reverse)

seq1  TATGGTGTCTGGTTGGTGGTCCAGTGTCCGAATATCTCAGTGGTCCAGAT  50
      ||||||   | |||||| |||||| |||||||| ||||||||||||||| 
seq2  TATGGT---TCGTTGGT-GTCCAG-GTCCGAAT-TCTCAGTGGTCCAGA-  43

seq1  TAGTTGAGACTGATGGTCTTCCTGTGGGGTCACC-ATCCTCCTCAATTTC  99
      |||||||||||||| ||||| ||| ||||||||| ||||| ||||||   
seq2  TAGTTGAGACTGAT-GTCTT-CTG-GGGGTCACCAATCCT-CTCAAT---  86

seq1  TCCCAACTTTACCCTAATTCAACCACAGGGGTCCCCAGCTTCTGTCCATT  149
      || | ||||||||   |||||  ||||||||| |||||||||||||||||
seq2  TCTCGACTTTACC--TATTCA--CACAGGGGT-CCCAGCTTCTGTCCATT  131

seq1  GTTTGGGTGTAAATATCAGCATCTGAATTTTTCAGCTACTTGTTAAGCCT  199
      |||| |||||||||||||||||||||| ||||||||||||||||||||||
seq2  GTTT-GGTGTAAATATCAGCATCTGAA-TTTTCAGCTACTTGTTAAGCCT  179

seq1  TTTGGAGGGCAGTCATCATAGGCCTCTGTAAGTATACCATACCATCAGGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGGGCAGTCATCATAGGCCTCTGTAAGTATACCATACCATCAGGA  229

seq1  ATAGTGTCAGACCCTGGGAACTCCCCTTGAGCTAGATCCCAATATGGGTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTCAGACCCTGGGAACTCCCCTTGAGCTAGATCCCAATATGGGTC  279

seq1  TGTCACTGGACCTCCTTTTCCTCATCAATTACAGGTTCTCATTGATATAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTGGACCTCCTTTTCCTCATCAATTACAGGTTCTCATTGATATAT  329

seq1  GACAAGTGCATATCTTTCCAAAGTCATCATAAACTGAAAACATCAAAAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGTGCATATCTTTCCAAAGTCATCATAAACTGAAAACATCAAAAGT  379

seq1  CATAAGCATATTTAATAAAACTATTTCCAAATTCTTGGTCAAAAATATGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGCATATTTAATAAAACTATTTCCAAATTCTTGGTCAAAAATATGT  429

seq1  CTAATATTAAGGAATTCCAACAAACATAAGGAAATCAGTAATAGTGAAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATTAAGGAATTCCAACAAACATAAGGAAATCAGTAATAGTGAAAT  479

seq1  GTAGAAATTAATTTAATTATTGCTATGTTAGAAAGACTTAGCATATTACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAATTAATTTAATTATTGCTATGTTAGAAAGACTTAGCATATTACA  529

seq1  ATGACCTCAGCTTATCATCAAATTGGGACACAGGACAAGAGGTATCATGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTCAGCTTATCATCAAATTGGGACACAGGACAAGAGGTATCATGT  579

seq1  TCAGGCATTCTTGAAATTATTATAATGCTAATCATTATCCTATGTCTAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCATTCTTGAAATTATTATAATGCTAATCATTATCCTATGTCTAGT  629

seq1  TCTCAAAGGTGCTATAGAAGTCACCAAGATTTGAGACAACAGTTCATGTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAGGTGCTATAGAAGTCACCAAGATTTGAGACAACAGTTCATGTC  679

seq1  ATGATGTGCTTCCTTGTTTTTGGAAAAGAGAAGTTTTGTTTTATAGACTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTGCTTCCTTGTTTTTGGAAAAGAGAAGTTTTGTTTTATAGACTA  729

seq1  TGATAATTTTTCCCACTAGTGATCACAGTGTCATCTTGCTTGTTCTTCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAATTTTTCCCACTAGTGATCACAGTGTCATCTTGCTTGTTCTTCCT  779

seq1  ACAAGGCACCACTGTTCCTGCAATCTTGGGTGAAAATTATTAAATCCTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCACCACTGTTCCTGCAATCTTGGGTGAAAATTATTAAATCCTTA  829

seq1  TGCTAAGATAATGGATGCTGTGAATCTCATGATGTTGATCATAGTATATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAGATAATGGATGCTGTGAATCTCATGATGTTGATCATAGTATATT  879

seq1  GATTATGAACTCCTTGAAATACTATTTACTTTTTTTTTTTAGTTTTATGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATGAACTCCTTGAAATACTATTTACTTTTTTTTTTTAGTTTTATGG  929

seq1  GGCAGAATCTTCCTATGTGTGTCTGATTGTCTGGGAAACTATGATTATAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAATCTTCCTATGTGTGTCTGATTGTCTGGGAAACTATGATTATAA  979

seq1  AACAGGCTGGCCTTGAATTTCTGCTAATCTTTCTGCCTCTGCTTCTTCTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCTGGCCTTGAATTTCTGCTAATCTTTCTGCCTCTGCTTCTTCTA  1029

seq1  TCCTGGAATTTCAGGTTTGTGTCAGGACCTCTAGCTTCTGGAATCTGAAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAATTTCAGGTTTGTGTCAGGACCTCTAGCTTCTGGAATCTGAAA  1079

seq1  AACATTTTAGTTACTCTTATCTTGTTTCTTCAGCCTTATATAAGGATTAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTAGTTACTCTTATCTTGTTTCTTCAGCCTTATATAAGGATTAA  1129

seq1  ATCCTTAACATGATTATTTTTTATATGAGTAACAGAGAATTC  1191
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTAACATGATTATTTTTTATATGAGTAACAGAGAATTC  1171