BAC Information

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BAC

Clone NameB6Ng01-126C05
ChromosomeX (Build37)
Map Location 154,820,951 - 154,946,972
singlet/doubletdoublet
Overlap genenone
Upstream genePhex, Gm1947, Sms, LOC100041181, EG625253, Mbtps2, LOC100040239, LOC667460, LOC667465, Smpx, Klhl34, Cnksr2, EG667483, LOC671033, LOC667487
Downstream geneLOC436243, LOC100040371, Rps6ka3, Eif1ay, Mtap7d2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126C05.bB6Ng01-126C05.g
ACCDH928587DH928588
length1,1331,021
definitionDH928587|Mus musculus domesticus DNA, BAC clone: B6Ng01-126C05, 5' end.DH928588|Mus musculus domesticus DNA, BAC clone: B6Ng01-126C05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(154,820,951 - 154,822,100)(154,945,920 - 154,946,972)
sequence
gaattcatgtgtacatatctgcacacaaatacacacacgtagttcaaaaa
acctagaactgaatcttataaacaactttctaagaagatatagatatgtg
tgcagttttggataaactagtatcatattatctgtaacacttagtcacat
ggttgtttccaccatttcatgttatgaggattttctttgttcataaattc
agatttgaaaaaccatcacatagtgctttcttaggaaaacaactacacag
cgaattagctgtagtcattcccttagattcctataacttcctatatagtt
agcttccaatggcttgaaccagcaacctttagtggggcatccattgagct
actggaattatttcaccagtgtgaattagaactagaaatgcccaggtttt
ttcatattcttggaagtcccatagccaagaactgactagtaaagaggaag
aactgaaatcctggccacatttgcctcaagggatgacaaactctgaagtg
aaaaatccctgagtgatcatgaggagactgagccttcccttgaaccattc
tcatctgactatctcaggttcctatccatctcttgccagtcttttctcct
gttttgtttttttttcttaaaaggcttcaataaatcatttgcatatagat
ctttgccccaaactttagttctcaagtagtgctatcactagaaagccaag
aacatgagtcatgtatgtggtttaaaaccttctatcagtcataccaagca
agaggtagaagagagactgagtcaatggctcactgggtaaagtgcttgtc
ctgcaagcatgaagacttgagccctagcacccctgtataaagcaggactg
gaagccctgactataatcctagtgttgggaggtagaacaaggaggatcgc
aagggcttactggccaaccagcctaggcaaatcagcaagctccattttca
gtgaaaagtctgtctcaaaacataagttagacagctacagaggaagaaat
ttgctatcacgttctggctcctcagtacattcacaggcactgcttcacac
atacatgtttgcaccatacacatgtataagtaaaaagatgacttattata
taataatttaaattgatattaatgtcattcaat
gaattcatatgttgaggcttggttcctaatgccactacatttggatgtga
cattgtgtgcagtgagagttctgtttgtatcaaatgatttccaagatttt
ggaaagtgatggaaattaggaaggcgggacatgtttgaaagtaatatggg
ggtcatgcttttgtcaactttatcatatcatagcaattctctctctgctc
tcccctatttcctttccaagctatgaggagttaataggcttagctgtaca
atactatctctgtcataatgtttagttttacctctgtcacaaagaaatga
ggccaaattaccatggggtgaaacttccgaagccataatccaaaatcaat
ctatgattctttaagtcaattgtcttaagtatttagatataataaaagaa
agtgaattaacacaaggcacactgaacaaattcctgttgataaaaatata
atgaggtacttggcagagctcttggttagtcagtacgagtcctaactcca
taatccaattactgaatatcaagttgtgagccagaggaagatggcagcaa
ggttattctatatatttattgcatgacactgactgattgaagtgtgccaa
gccaagactttaatgaataatcttacaggctcaggtactttcaaattttg
aataaaaatcagaaactatatcagagactgtatggttatctgttgttgca
caataagtgatatttcaatgcagtagtcttaaaagaatcaatcatttatt
tcattggtaatccaaacttcagtgggtacacctaatcagagtcagctaag
gatctactctttgaatggttggtggctatagttagagtatctccattctc
atggtcctgtagcctagtttgtgtcattactggttacttatagagttcta
gagcgagaaagaaagatacaaacctcaaagcccttcacagcttaagcaga
cagatccagcacagaggaaagttactccatcctatcatgagtatgatcag
cttgcaaccgtagtttactga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_154820951_154822100
seq2: B6Ng01-126C05.b_46_1178

seq1  GAATTCATGTGTACATATCTGCACACAAATACACACACGTAGTTCAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTGTACATATCTGCACACAAATACACACACGTAGTTCAAAAA  50

seq1  ACCTAGAACTGAATCTTATAAACAACTTTCTAAGAAGATATAGATATGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGAACTGAATCTTATAAACAACTTTCTAAGAAGATATAGATATGTG  100

seq1  TGCAGTTTTGGATAAACTAGTATCATATTATCTGTAACACTTAGTCACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTTTGGATAAACTAGTATCATATTATCTGTAACACTTAGTCACAT  150

seq1  GGTTGTTTCCACCATTTCATGTTATGAGGATTTTCTTTGTTCATAAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTTTCCACCATTTCATGTTATGAGGATTTTCTTTGTTCATAAATTC  200

seq1  AGATTTGAAAAACCATCACATAGTGCTTTCTTAGGAAAACAACTACACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGAAAAACCATCACATAGTGCTTTCTTAGGAAAACAACTACACAG  250

seq1  CGAATTAGCTGTAGTCATTCCCTTAGATTCCTATAACTTCCTATATAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATTAGCTGTAGTCATTCCCTTAGATTCCTATAACTTCCTATATAGTT  300

seq1  AGCTTCCAATGGCTTGAACCAGCAACCTTTAGTGGGGCATCCATTGAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCAATGGCTTGAACCAGCAACCTTTAGTGGGGCATCCATTGAGCT  350

seq1  ACTGGAATTATTTCACCAGTGTGAATTAGAACTAGAAATGCCCAGGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAATTATTTCACCAGTGTGAATTAGAACTAGAAATGCCCAGGTTTT  400

seq1  TTCATATTCTTGGAAGTCCCATAGCCAAGAACTGACTAGTAAAGAGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATTCTTGGAAGTCCCATAGCCAAGAACTGACTAGTAAAGAGGAAG  450

seq1  AACTGAAATCCTGGCCACATTTGCCTCAAGGGATGACAAACTCTGAAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAATCCTGGCCACATTTGCCTCAAGGGATGACAAACTCTGAAGTG  500

seq1  AAAAATCCCTGAGTGATCATGAGGAGACTGAGCCTTCCCTTGAACCATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCCCTGAGTGATCATGAGGAGACTGAGCCTTCCCTTGAACCATTC  550

seq1  TCATCTGACTATCTCAGGTTCCTATCCATCTCTTGCCAGTCTTTTCTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGACTATCTCAGGTTCCTATCCATCTCTTGCCAGTCTTTTCTCCT  600

seq1  GTTTTGTTTTTTTTTCTTAAAAGGCTTCAATAAATCATTTGCATATAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTTTTTTCTTAAAAGGCTTCAATAAATCATTTGCATATAGAT  650

seq1  CTTTGCCCCAAACTTTAGTTCTCAAGTAGTGCTATCACTAGAAAGCCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCCCAAACTTTAGTTCTCAAGTAGTGCTATCACTAGAAAGCCAAG  700

seq1  AACATGAGTCATGTATGTGGTTTAAAACCTTCTATCAGTCATACCAAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAGTCATGTATGTGGTTTAAAACCTTCTATCAGTCATACCAAGCA  750

seq1  AGAGGTAGAAGAGAGACTGAGTCAATGGCTCACTGGGTAAAGTGCTTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAGAAGAGAGACTGAGTCAATGGCTCACTGGGTAAAGTGCTTGTC  800

seq1  CTGCAAGCATGAAGACTTGAGCCCTAGCACCCCTGTATAAAGCAGGGACT  850
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTGCAAGCATGAAGACTTGAGCCCTAGCACCCCTGTATAAAGCA-GGACT  849

seq1  GGAAGCCCTGACTATAATCCTAGTGTTGGGAGGTAGAACAAGGAGGATCG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCCTGACTATAATCCTAGTGTTGGGAGGTAGAACAAGGAGGATCG  899

seq1  CAAGGGCTTACTGGCCAACCAGCCTAGGCAAATCAGCAAGCTCCATTTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGCTTACTGGCCAACCAGCCTAGGCAAATCAGCAAGCTCCATTTTC  949

seq1  AGTGAAAAAGTCTGTCTCAAAACATAAGTTAGACAGCTACAGAGGAAGAA  1000
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTG-AAAAGTCTGTCTCAAAACATAAGTTAGACAGCTACAGAGGAAGAA  998

seq1  ATTTGCTATCACGTTCTGGCCTCCTCAAGTACATTCACAGGCACCTGCCT  1050
      ||||||||||||||||||| |||||| |||||||||||||||| ||| ||
seq2  ATTTGCTATCACGTTCTGG-CTCCTC-AGTACATTCACAGGCA-CTG-CT  1044

seq1  TCACACATACATGTGTGCACACATACACATGTATAAAGTTAAAAAAGATG  1100
      |||||||||||||| ||||| ||||||||||||| ||||  |||||||||
seq2  TCACACATACATGTTTGCAC-CATACACATGTAT-AAGT--AAAAAGATG  1090

seq1  AACTTAATTATAATAATATATTTAACATTGTATATAAAATGTCATTCAAT  1150
       |||| ||||| |||||| |||||| |||| ||||  |||||||||||||
seq2  -ACTT-ATTAT-ATAATA-ATTTAA-ATTG-ATAT-TAATGTCATTCAAT  1133

seq1: chrX_154945920_154946972
seq2: B6Ng01-126C05.g_66_1086 (reverse)

seq1  TCAGTAAAACTAACTGTTTTGCAAGCTGGTATCAATTACTCATAGATTAG  50
      ||||| ||||| || |  ||||||||||  ||||  ||||||| |||   
seq2  TCAGT-AAACT-ACGG--TTGCAAGCTG--ATCA--TACTCAT-GAT--A  39

seq1  GGATGGGAGTTAACTTTCCCTCCCTGTGCTGGGATCTGGTCTGGCTTAAG  100
      |||| |||| ||||||||   | ||||||| |||||| |||| |||||||
seq2  GGAT-GGAG-TAACTTTC---CTCTGTGCT-GGATCT-GTCT-GCTTAAG  81

seq1  CCTGTGAAGGGCCTGTGAGGTTTTGTATCTTTTCTTTCTCGCTCTTAGAA  150
       |||||||||| || ||||| |||||||| |||||||||||||| |||||
seq2  -CTGTGAAGGG-CTTTGAGG-TTTGTATC-TTTCTTTCTCGCTC-TAGAA  126

seq1  CTCTATTAAGTAACCAGTTAATGAACACAAACTAGGCTACAGGACCATGA  200
      ||||| ||||||||||| ||||| ||||||||||||||||||||||||||
seq2  CTCTA-TAAGTAACCAG-TAATG-ACACAAACTAGGCTACAGGACCATGA  173

seq1  GAATGGAGATACTCTAACTAATAGCCAACCAACCATTCAAAGAGTAGATC  250
      ||||||||||||||||||| |||||| |||||||||||||||||||||||
seq2  GAATGGAGATACTCTAACT-ATAGCC-ACCAACCATTCAAAGAGTAGATC  221

seq1  CTTAGCTGACTCTGATTAGGTTGTTACCCACTGAAGTTTGGATTACCAAT  300
      |||||||||||||||||||||   ||||||||||||||||||||||||||
seq2  CTTAGCTGACTCTGATTAGGT--GTACCCACTGAAGTTTGGATTACCAAT  269

seq1  GAAATAAATGATTGATTCTTTTTAAGACTACTGCATTGAAATATCACTTA  350
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GAAATAAATGATTGATTC-TTTTAAGACTACTGCATTGAAATATCACTTA  318

seq1  TTGTGCAACAACAGATAACCATACAGTCTCTGATATAGTTTCTGATTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCAACAACAGATAACCATACAGTCTCTGATATAGTTTCTGATTTTT  368

seq1  ATTCAAAATTTGAAAGTACCTGAGCCTGTAAGATTATTCATTAAAGTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAAATTTGAAAGTACCTGAGCCTGTAAGATTATTCATTAAAGTCTT  418

seq1  GGCTTGGCACACTTCAATCAGTCAGTGTCATGCAATAAATATATAGAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGGCACACTTCAATCAGTCAGTGTCATGCAATAAATATATAGAATA  468

seq1  ACCTTGCTGCCATCTTCCTCTGGCTCACAACTTGATATTCAGTAATTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGCTGCCATCTTCCTCTGGCTCACAACTTGATATTCAGTAATTGGA  518

seq1  TTATGGAGTTAGGACTCGTACTGACTAACCAAGAGCTCTGCCAAGTACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGAGTTAGGACTCGTACTGACTAACCAAGAGCTCTGCCAAGTACCT  568

seq1  CATTATATTTTTATCAACAGGAATTTGTTCAGTGTGCCTTGTGTTAATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATATTTTTATCAACAGGAATTTGTTCAGTGTGCCTTGTGTTAATTC  618

seq1  ACTTTCTTTTATTATATCTAAATACTTAAGACAATTGACTTAAAGAATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTTTATTATATCTAAATACTTAAGACAATTGACTTAAAGAATCA  668

seq1  TAGATTGATTTTGGATTATGGCTTCGGAAGTTTCACCCCATGGTAATTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTGATTTTGGATTATGGCTTCGGAAGTTTCACCCCATGGTAATTTG  718

seq1  GCCTCATTTCTTTGTGACAGAGGTAAAACTAAACATTATGACAGAGATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCATTTCTTTGTGACAGAGGTAAAACTAAACATTATGACAGAGATAG  768

seq1  TATTGTACAGCTAAGCCTATTAACTCCTCATAGCTTGGAAAGGAAATAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTACAGCTAAGCCTATTAACTCCTCATAGCTTGGAAAGGAAATAGG  818

seq1  GGAGAGCAGAGAGAGAATTGCTATGATATGATAAAGTTGACAAAAGCATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCAGAGAGAGAATTGCTATGATATGATAAAGTTGACAAAAGCATG  868

seq1  ACCCCCATATTACTTTCAAACATGTCCCGCCTTCCTAATTTCCATCACTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCATATTACTTTCAAACATGTCCCGCCTTCCTAATTTCCATCACTT  918

seq1  TCCAAAATCTTGGAAATCATTTGATACAAACAGAACTCTCACTGCACACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAATCTTGGAAATCATTTGATACAAACAGAACTCTCACTGCACACA  968

seq1  ATGTCACATCCAAATGTAGTGGCATTAGGAACCAAGCCTCAACATATGAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACATCCAAATGTAGTGGCATTAGGAACCAAGCCTCAACATATGAA  1018

seq1  TTC  1053
      |||
seq2  TTC  1021