BAC Information

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BAC

Clone NameB6Ng01-126L13
ChromosomeX (Build37)
Map Location 107,224,380 - 107,225,330
singlet/doubletsinglet
Overlap genenone
Upstream geneSh3bgrl, EG622976, LOC100042831, LOC213474, LOC245573
Downstream geneEG634340, LOC668530, LOC100043316, Pou3f4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126L13.bB6Ng01-126L13.g
ACCDH929016DH929017
length1,027940
definitionDH929016|Mus musculus domesticus DNA, BAC clone: B6Ng01-126L13, 5' end.DH929017|Mus musculus domesticus DNA, BAC clone: B6Ng01-126L13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaagtatacaaataagggggtctctacatctatgtctgtttca
tgtgcccttggggggcctcttttctttctgtttgttgttttttcctgttg
caatgcattagtttttgttttattttattgtgttatactttggatatttt
aatattataacttagaagcaatgttgctctctaatgagagacagaaaagg
ggtggctctaaatgggagaagacttggggaagaagggaaagttgtaaatg
gagaaactgtaatcaagatatattatgtgagaagaaaatgctattttcaa
taaaaaggaaaaacgttaacagaaggcaaactaaacatcatattaatgaa
tttctaataggctttaagactgaacaaacaattcacaaaaggcatacata
agaacagtgtgtacaagtggatattagcctaaaagctcggaatacacaag
atacaattcacagaccaaatgaaggtcaagaagaaggaagaccaaagtgt
ggatgcttcagtctttcttaggaaggggaacaaaattctcaagggaggaa
atacggagacaaagtgtggagcagagattgaaggaaaggccatgtagaga
ctgccccacctggggatccatcccgtatatagacactaatcccagacact
atggtggatgccaagaagtgcttgctgacaggagcctgatatagctgtct
cctgagaggctttgccagagcctggcaaatacagaggcagaagctcacag
ctacccattggactgatcactgggtccccaatgaaggagttagagaaagg
actgaaggagctgaagtggtttgcaacccataggaagaacaacaataaca
acaaaccagactcccaagagctcgcaggaactaaaccactaaccaaagtg
tacacaatgagtgacccatggtttcttgctgcatatgtagcagaggatgg
ccttgttggacatcaatgggaggaaagcccttgtttctgggagggatgcc
agggctgcagttggagtggtgtggtag
gaattctcagctgaggaattctgaatggctgagaaacacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacctgagatt
ccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagca
gatgctggcgaagatgtggagaaagaggaacactcctccattgttggtgg
gattgcaagcttgcacaaccactctggaaatcagtttggcgttttctcag
aaaattggacatggtactactggaggatcctgcaatacctctcctgggca
tatatccagatgatattccaactagtaagaaagaaacatgctccactatg
ttcatagcagccttatttataatagccagaagttggaaaggaaccagatg
ctcctcaacagagggatggatacattcatttctttattagatttttttcc
ttttgttttttattgaggctatgtttttccttttttttttttttttttgt
atcgaggctatggcaaacaggattagtttgctctttgttttcttttcttt
tcttttgttttgtttttcaaaaataattttattagatattttcttcattt
atttttcaaatgttatccaaaagtcccctaaaccctcacccaccattctc
cccaacctacccactcccgcttcctggtcctggtattcccctgtactggg
gcatataatcttcgaagaccaaggaactctcctcccaatgcatctattgg
atggaacactgggcccccaatgaaggatatagataaagtacccaaggagc
taaagggttctgcaaccctatagaaggaacaacatatgaactaaccagtt
cccctaaagctatgtctctagctgctctttgtttctaagttaatttgttt
gttattatttgctacctaatgaattttgggtaacaataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_107224380_107225330
seq2: B6Ng01-126L13.g_70_1009

seq1  GAATTCTCAGCTGAGGAATTCTGAATGGCTGAGAAACACTTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCTGAGGAATTCTGAATGGCTGAGAAACACTTGAAAAAATG  50

seq1  TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCTGAGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCTGAGATT  100

seq1  CCATCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCA  150

seq1  GATGCTGGCGAAGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGGCGAAGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGG  200

seq1  GATTGCAAGCTTGCACAACCACTCTGGAAATCAGTTTGGCGTTTTCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCAAGCTTGCACAACCACTCTGGAAATCAGTTTGGCGTTTTCTCAG  250

seq1  AAAATTGGACATGGTACTACTGGAGGATCCTGCAATACCTCTCCTGGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGGACATGGTACTACTGGAGGATCCTGCAATACCTCTCCTGGGCA  300

seq1  TATATCCAGATGATATTCCAACTAGTAAGAAAGAAACATGCTCCACTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCAGATGATATTCCAACTAGTAAGAAAGAAACATGCTCCACTATG  350

seq1  TTCATAGCAGCCTTATTTATAATAGCCAGAAGTTGGAAAGGAACCAGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGCAGCCTTATTTATAATAGCCAGAAGTTGGAAAGGAACCAGATG  400

seq1  CTCCTCAACAGAGGGATGGATACATTCATTTCTTTATTAGATTTTTTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCAACAGAGGGATGGATACATTCATTTCTTTATTAGATTTTTTTCC  450

seq1  TTTTGTTTTTTATTGAGGCTATGTTTTTCCTTTTTTTTTTTTTTTTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTTATTGAGGCTATGTTTTTCCTTTTTTTTTTTTTTTTTTGT  500

seq1  ATCGAGGCTATGGCAAACAGGATTAGTTTGCTCTTTGTTTTCTTTTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAGGCTATGGCAAACAGGATTAGTTTGCTCTTTGTTTTCTTTTCTTT  550

seq1  TCTTTTGTTTTGTTTTTCAAAAATAATTTTATTAGATATTTTCTTCATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGTTTTGTTTTTCAAAAATAATTTTATTAGATATTTTCTTCATTT  600

seq1  ATTTTTCAAATGTTATCCAAAAGTCCCCTAAACCCTCACCCACCATTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCAAATGTTATCCAAAAGTCCCCTAAACCCTCACCCACCATTCTC  650

seq1  CCCAACCTACCCACTCCCGCTTCCTGGTCCTGGTATTCCCCTGTACTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACCTACCCACTCCCGCTTCCTGGTCCTGGTATTCCCCTGTACTGGG  700

seq1  GCATATAATCTTCGCAAGACCAAGGAACTCTCCTCCCAATGCATCTATTG  750
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GCATATAATCTTCG-AAGACCAAGGAACTCTCCTCCCAATGCATCTATTG  749

seq1  GATGGAACACTGGGCCCCCAATGAAGGATATAGATAAAGTACCCAAGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAACACTGGGCCCCCAATGAAGGATATAGATAAAGTACCCAAGGAG  799

seq1  CTAAAGGGTTCTGCAACCCTATAGAAGGAACAACAATATGAACTAACCAG  850
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTAAAGGGTTCTGCAACCCTATAGAAGGAACAAC-ATATGAACTAACCAG  848

seq1  TTCCCCTCAGAGCTATGTCTCTAGCTGCTCTTTGTTTTCTAAGTTAATTT  900
      ||||||| | |||||||||||||||||||||||| |||||||||||||||
seq2  TTCCCCT-AAAGCTATGTCTCTAGCTGCTCTTTG-TTTCTAAGTTAATTT  896

seq1  GTTTTGTTTATTTATTTGTCTACTTTATTGAATTTTGGGTAAACAAATAA  950
      | ||||||   ||||||| ||||  || ||||||||||||||   |||||
seq2  G-TTTGTT--ATTATTTG-CTAC-CTAATGAATTTTGGGTAA--CAATAA  939

seq1  A  951
      |
seq2  A  940