BAC Information

Click to search

BAC

Clone NameB6Ng01-128H13
ChromosomeX (Build37)
Map Location 81,717,967 - 81,849,648
singlet/doubletdoublet
Overlap geneDmd
Upstream geneTsga8, LOC100042306
Downstream geneLOC100042296, LOC669833, 1600014K23Rik, Map3k7ip3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128H13.bB6Ng01-128H13.g
ACCDH930313DH930314
length1,1371,067
definitionDH930313|Mus musculus domesticus DNA, BAC clone: B6Ng01-128H13, 5' end.DH930314|Mus musculus domesticus DNA, BAC clone: B6Ng01-128H13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,848,503 - 81,849,648)(81,717,967 - 81,719,043)
sequence
gaattctatatggaatatgatcaggaaaataaaatatttccctatatagg
caatctgtggactaacttgaggatctggagtaaacactagtttactcttg
tgttgtttccttcttgaaactaaaatctaccaaggaatgttattaaaata
aagttcttccaagtaacatatactttacttaacattcaacaatttcaagc
tgaattgaagattttattgctttaaatcagcttccaaatacataaagatt
ttgcatacatttatctgcgtgattggcagtttcagggtaggcaatatatt
agtgttcagtagtagagcagtttctaacctgaattgtgagaaatgatgca
atcggcatgctttccatagcaagttttacaatgatgtgacatatcagtct
tcacacctcaaatatccacattatcaatcttgcctgtttaatgtgaggtt
atatgataaacaaaagtggaaatgccatcctgcaaaagtcacagctttta
gttattaaaactaacactagaaaatgggaaaatgcatgaaataagaaata
aaaacaaggaaatacagttgttaaaaacacattgtgggaaaaaataacat
ttattgatcaaatgtggcagttgctcttttgtaaggaagagagcacatta
ttattaggaaggtacctgaaactgcttaggtaaatatgagcaaagctgtt
ttgcagtagaattgtaaacagggctttctgtggtaatagaagtattgtat
cttgtactgcctaatggggaaatcattacatagaggggctcttaagcact
tagaagatggattggtaaaaactgaatctcatgttatatttaataataat
taaatgtaaatagaaacctatgactggtggctattccatcatacaatata
gatatagaatatgtcaattttactttatgtctgtgttcagttgggtaagt
tattagacaaagagcaaaatacatgagagtattatgttctacttacttat
agatctataagatccacaaaataaggagaaattgtgacaaaattctacaa
cttagtctgaacaagtgcacatggaaaaaacatacaggtagtttctaatt
ttgtgagatattggggagtcaacgagaaatacagaat
gaattcaagggtctttcccactttcttttctattagattcagtaattctg
gttgtatgatgaggtccttgatcttcttggacttgaacttcatgcaagat
gacaaatatgggtctattttcatttttctccatacagacagccagttaaa
acaggaccatttattgaagatgctttctttttcccattgtatattttcgt
attccttgaacagctcccatgagatgacactcctaggagatcttacactg
agttgccttttctagatgtttcagattctttccctactgaaccatatcat
tcaggcttcattgctcctggccttctgattgtgatgctgctgtaactctt
ctctataaagcagattaactgttgcttccttttgtcactgacttctgatc
acccccctgtgtgttgtttctagacttcatttcttaccaccaaattcaac
tgggtacgcatcagtccacagagaatagcacacagactgcagaccaagtt
tcctccaattttctatgttttcaatcttcatgtcacacttgtcaccatat
ttcaatatttttaatcagccaagtttttataaaatggtaatacttaacat
taatgactagatagtaacactttctgaatattgtgatgatgacaatgacg
acgatgatgatagtcatgatcatgacaataataatgttctgtgtcatttc
tgtgtacattgcttaaattatcattgagtctacataactttccctgtgac
atttactctgtttctttttcttcctttactgggaacaaaagctgaagctt
agagaggttgaataacttaagcaaggtctcagagttcctagggcagatag
caggattcttacccatgtggccttaccctaagacttcatatccttaccca
taaatattcaacactattaactttaatttggggatttaatgaccttgaaa
tggggtttcatatacaaagattacttaactacctctcagtttaaaataat
atgtattgcttttctcactattactgctttcacaaaacaaaggtaaaata
caaggttttcattgtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_81848503_81849648
seq2: B6Ng01-128H13.b_49_1185 (reverse)

seq1  ATTCTGTAATTCTCTGTTGACT-CCCAATACTTCACAAAATTAGAAACCT  49
      |||||||| ||||| ||||||| |||||||  ||||||||||||||| ||
seq2  ATTCTGTATTTCTC-GTTGACTCCCCAATATCTCACAAAATTAGAAA-CT  48

seq1  ACACTGTATGTTTTCTCCATGTGCCACTTGTTCAGACTAAGTTGTAGAAA  99
      || ||||||||||| |||||||| ||||||||||||||||||||||| ||
seq2  AC-CTGTATGTTTTTTCCATGTG-CACTTGTTCAGACTAAGTTGTAG-AA  95

seq1  TTTTGTCCACAATTTCT-CTTATTTTGT-GATCTTATAGATCTTATAAGT  147
      |||||| |||||||||| |||||||||| ||||||||||||| |||||||
seq2  TTTTGT-CACAATTTCTCCTTATTTTGTGGATCTTATAGATC-TATAAGT  143

seq1  AAGTAGAAACAATAATACTCTTCATGTATTTTGGCCTCTTTGTCTAATAA  197
      ||||||||   ||||||||| ||||||||||||  |||||||||||||||
seq2  AAGTAGAA--CATAATACTC-TCATGTATTTTG--CTCTTTGTCTAATAA  188

seq1  CTTACCCAACTGAACACAGACATAAAGTAAAATTGACATATTCTATATCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCCAACTGAACACAGACATAAAGTAAAATTGACATATTCTATATCT  238

seq1  ATATTGTATGATGGAATAGCCACCAGTCATAGGTTTCTATTTACATTTAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTATGATGGAATAGCCACCAGTCATAGGTTTCTATTTACATTTAA  288

seq1  TTATTATTAAATATAACATGAGATTCAGTTTTTACCAATCCATCTTCTAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTAAATATAACATGAGATTCAGTTTTTACCAATCCATCTTCTAA  338

seq1  GTGCTTAAGAGCCCCTCTATGTAATGATTTCCCCATTAGGCAGTACAAGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTAAGAGCCCCTCTATGTAATGATTTCCCCATTAGGCAGTACAAGA  388

seq1  TACAATACTTCTATTACCACAGAAAGCCCTGTTTACAATTCTACTGCAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATACTTCTATTACCACAGAAAGCCCTGTTTACAATTCTACTGCAAA  438

seq1  ACAGCTTTGCTCATATTTACCTAAGCAGTTTCAGGTACCTTCCTAATAAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTTGCTCATATTTACCTAAGCAGTTTCAGGTACCTTCCTAATAAT  488

seq1  AATGTGCTCTCTTCCTTACAAAAGAGCAACTGCCACATTTGATCAATAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGCTCTCTTCCTTACAAAAGAGCAACTGCCACATTTGATCAATAAA  538

seq1  TGTTATTTTTTCCCACAATGTGTTTTTAACAACTGTATTTCCTTGTTTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTTTTTCCCACAATGTGTTTTTAACAACTGTATTTCCTTGTTTTT  588

seq1  ATTTCTTATTTCATGCATTTTCCCATTTTCTAGTGTTAGTTTTAATAACT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTATTTCATGCATTTTCCCATTTTCTAGTGTTAGTTTTAATAACT  638

seq1  AAAAGCTGTGACTTTTGCAGGATGGCATTTCCACTTTTGTTTATCATATA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTGTGACTTTTGCAGGATGGCATTTCCACTTTTGTTTATCATATA  688

seq1  ACCTCACATTAAACAGGCAAGATTGATAATGTGGATATTTGAGGTGTGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACATTAAACAGGCAAGATTGATAATGTGGATATTTGAGGTGTGAA  738

seq1  GACTGATATGTCACATCATTGTAAAACTTGCTATGGAAAGCATGCCGATT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGATATGTCACATCATTGTAAAACTTGCTATGGAAAGCATGCCGATT  788

seq1  GCATCATTTCTCACAATTCAGGTTAGAAACTGCTCTACTACTGAACACTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATTTCTCACAATTCAGGTTAGAAACTGCTCTACTACTGAACACTA  838

seq1  ATATATTGCCTACCCTGAAACTGCCAATCACGCAGATAAATGTATGCAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTGCCTACCCTGAAACTGCCAATCACGCAGATAAATGTATGCAAA  888

seq1  ATCTTTATGTATTTGGAAGCTGATTTAAAGCAATAAAATCTTCAATTCAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTATGTATTTGGAAGCTGATTTAAAGCAATAAAATCTTCAATTCAG  938

seq1  CTTGAAATTGTTGAATGTTAAGTAAAGTATATGTTACTTGGAAGAACTTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAATTGTTGAATGTTAAGTAAAGTATATGTTACTTGGAAGAACTTT  988

seq1  ATTTTAATAACATTCCTTGGTAGATTTTAGTTTCAAGAAGGAAACAACAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATAACATTCCTTGGTAGATTTTAGTTTCAAGAAGGAAACAACAC  1038

seq1  AAGAGTAAACTAGTGTTTACTCCAGATCCTCAAGTTAGTCCACAGATTGC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAAACTAGTGTTTACTCCAGATCCTCAAGTTAGTCCACAGATTGC  1088

seq1  CTATATAGGGAAATATTTTATTTTCCTGATCATATTCCATATAGAATTC  1146
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATAGGGAAATATTTTATTTTCCTGATCATATTCCATATAGAATTC  1137

seq1: chrX_81717967_81719043
seq2: B6Ng01-128H13.g_69_1135

seq1  GAATTCAAGGGTCTTTCCCACTTTCTTTTCTATTAGATTCAGTAATTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGGTCTTTCCCACTTTCTTTTCTATTAGATTCAGTAATTCTG  50

seq1  GTTGTATGATGAGGTCCTTGATCTTCTTGGACTTGAACTTCATGCAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTATGATGAGGTCCTTGATCTTCTTGGACTTGAACTTCATGCAAGAT  100

seq1  GACAAATATGGGTCTATTTTCATTTTTCTCCATACAGACAGCCAGTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATATGGGTCTATTTTCATTTTTCTCCATACAGACAGCCAGTTAAA  150

seq1  ACAGGACCATTTATTGAAGATGCTTTCTTTTTCCCATTGTATATTTTCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGACCATTTATTGAAGATGCTTTCTTTTTCCCATTGTATATTTTCGT  200

seq1  ATTCCTTGAACAGCTCCCATGAGATGACACTCCTAGGAGATCTTACACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTGAACAGCTCCCATGAGATGACACTCCTAGGAGATCTTACACTG  250

seq1  AGTTGCCTTTTCTAGATGTTTCAGATTCTTTCCCTACTGAACCATATCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCCTTTTCTAGATGTTTCAGATTCTTTCCCTACTGAACCATATCAT  300

seq1  TCAGGCTTCATTGCTCCTGGCCTTCTGATTGTGATGCTGCTGTAACTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTTCATTGCTCCTGGCCTTCTGATTGTGATGCTGCTGTAACTCTT  350

seq1  CTCTATAAAGCAGATTAACTGTTGCTTCCTTTTGTCACTGACTTCTGATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATAAAGCAGATTAACTGTTGCTTCCTTTTGTCACTGACTTCTGATC  400

seq1  ACCCCCCTGTGTGTTGTTTCTAGACTTCATTTCTTACCACCAAATTCAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCCTGTGTGTTGTTTCTAGACTTCATTTCTTACCACCAAATTCAAC  450

seq1  TGGGTACGCATCAGTCCACAGAGAATAGCACACAGACTGCAGACCAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACGCATCAGTCCACAGAGAATAGCACACAGACTGCAGACCAAGTT  500

seq1  TCCTCCAATTTTCTATGTTTTCAATCTTCATGTCACACTTGTCACCATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCAATTTTCTATGTTTTCAATCTTCATGTCACACTTGTCACCATAT  550

seq1  TTCAATATTTTTAATCAGCCAAGTTTTTATAAAATGGTAATACTTAACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATATTTTTAATCAGCCAAGTTTTTATAAAATGGTAATACTTAACAT  600

seq1  TAATGACTAGATAGTAACACTTTCTGAATATTGTGATGATGACAATGACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACTAGATAGTAACACTTTCTGAATATTGTGATGATGACAATGACG  650

seq1  ACGATGATGATAGTCATGATCATGACAATAATAATGTTCTGTGTCATTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATGATGATAGTCATGATCATGACAATAATAATGTTCTGTGTCATTTC  700

seq1  TGTGTACATTGCTTAAATTATCATTGAGTCTACATAACTTTCCCTGTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACATTGCTTAAATTATCATTGAGTCTACATAACTTTCCCTGTGAC  750

seq1  ATTTACTCTGTTTC-TTTTCTTCCTTTACTGGGAACAAAAGCTGAAGCTT  799
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATTTACTCTGTTTCTTTTTCTTCCTTTACTGGGAACAAAAGCTGAAGCTT  800

seq1  AGAGAGGTTGAATAACTTAAGCAAGGTCTCAGAGTTCCTAGGGCAGATAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGTTGAATAACTTAAGCAAGGTCTCAGAGTTCCTAGGGCAGATAG  850

seq1  CAGGATTCTTACCCATGT-GCCTTACCCTAAGACTTCATAT-CTTACCCA  897
      |||||||||||||||||| |||||||||||||||||||||| ||||||||
seq2  CAGGATTCTTACCCATGTGGCCTTACCCTAAGACTTCATATCCTTACCCA  900

seq1  TTAAATTATTCAACACTATTAACTTTAATTT-GGGATTTAATGACCTTGA  946
      |  || ||||||||||||||||||||||||| ||||||||||||||||||
seq2  T--AAATATTCAACACTATTAACTTTAATTTGGGGATTTAATGACCTTGA  948

seq1  AATGGTGTTTCATATACAAAAGAATTACTTAACTACCTCTCAATTTTTAA  996
      ||||| ||||||||||||||   ||||||||||||||||||| |||   |
seq2  AATGGGGTTTCATATACAAA--GATTACTTAACTACCTCTCAGTTT---A  993

seq1  AAATAATATGTATTGCTTTTCTTCACTATTATCTGCTTTTTCACCAAAAC  1046
      ||||||||||||||||||||| ||||||||| ||||  ||||| ||||||
seq2  AAATAATATGTATTGCTTTTC-TCACTATTA-CTGC--TTTCA-CAAAAC  1038

seq1  AAAGGTAAAATACAAAGTTTTTCCATTGTAA  1077
      ||||||||||||||| |||||  ||||||||
seq2  AAAGGTAAAATACAAGGTTTT--CATTGTAA  1067