MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-128N12
Chromosome	X (Build37)
Map Location	15,274,840 - 15,275,960
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC668991, 4930403L05Rik
Downstream gene	LOC100043949, LOC100043950, Cypt6, LOC100038939, LOC668993, Maoa
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC668991 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668991
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins pseudo : _no_value

name	4930403L05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67395 MGI:1914645
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043949 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043949
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100043950 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043950
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Cypt6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66742 MGI:3616444
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100038939 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038939
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC668993 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668993
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 22 Proteins pseudo : _no_value

name	Maoa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17161 MGI:96915
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930403L05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383460 GeneID:67395 MGI:1914645
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930403L05 gene transcript_id : NM_026128.2

name	Cypt6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114842378 GeneID:66742 MGI:3616444
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine-rich perinuclear theca 6 transcript_id : NM_025738.2

name	LOC100038939 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270941 GeneID:100038939
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100038939, transcript variant 1 transcript_id : XM_001471577.1

name	LOC100038939 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270939 GeneID:100038939
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100038939, transcript variant 2 transcript_id : XM_001471579.1

name	Maoa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84579838 GeneID:17161 MGI:96915
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : monoamine oxidase A transcript_id : NM_173740.2

name	4930403L05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385638 CCDS:CCDS30031.1 GeneID:67395 MGI:1914645
definition	GO_function : GO:0004864 - protein phosphatase inhibitor activity [Evidence IEA] GO_process : GO:0009966 - regulation of signal transduction [Evidence IEA] codon_start : 1 note : novel gene similar to protein phosphatase 1 regulatory subunit 2 Ppp1r2 product : type 1 protein phosphatase inhibitor protein_id : NP_080404.1

name	Cypt6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114842379 GeneID:66742 MGI:3616444
definition	GO_component : GO:0001669 - acrosome [Evidence IDA] codon_start : 1 note : basic protein CKT1R3; cysteine-rich postacrosomal PT protein; cysteine-rich perinuclear theca protein 5; cysteine-rich perinuclear theca protein 1; cysteine-rich perinuclear theca protein 6; cysteine-rich postacrosomal perinuclear theca protein; cysteine-rich perinuclear theca 1 product : cysteine-rich perinuclear theca 5 protein_id : NP_080014.2

name	LOC100038939 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270942 GeneID:100038939
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001471627.1

name	LOC100038939 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270940 GeneID:100038939
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001471629.1

name	Maoa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84579839 CCDS:CCDS30033.1 GeneID:17161 MGI:96915
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence TAS] [Evidence IDA] GO_function : GO:0008131 - amine oxidase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006584 - catecholamine metabolism [Evidence IEA]; GO:0042420 - dopamine catabolism [Evidence IDA]; GO:0006118 - electron transport [Evidence IEA]; GO:0042135 - neurotransmitter catabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : monoamine oxidase A protein_id : NP_776101.2

name	LOC100043949 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043949
definition	number : 3 pseudo : _no_value

name	LOC100043949 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043949
definition	number : 2 pseudo : _no_value

name	LOC100043949 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043949
definition	number : 1 pseudo : _no_value

name	LOC100043950 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043950
definition	number : 1 pseudo : _no_value

name	LOC668991 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270997 GeneID:668991
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : similar to ribosomal protein L6 pseudo : _no_value transcript_id : XR_033255.1

name	LOC668993 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270998 GeneID:668993
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 22 Proteins product : similar to casein kinase II alpha subunit pseudo : _no_value transcript_id : XR_033273.1

clone name	MSMg01-344F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167O06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-482C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349N24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-437C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325D21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-546G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513H05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-425J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049F05
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-128N12.b	B6Ng01-128N12.g
ACC	DH930587	DH930588
length	1,121	1,117
definition	DH930587\|Mus musculus domesticus DNA, BAC clone: B6Ng01-128N12, 5' end.	DH930588\|Mus musculus domesticus DNA, BAC clone: B6Ng01-128N12, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	tactatatagaagaaggtagggagagagtggtcagccttgtctagtccct gattttagtagaactgcttcaagtttctctccatttagtttgattttgac tactggtttgctgtatatagcttttgctatgtttaggtatgggccttgaa ttcctgatctttctaagacttttatcatgaaggggtgttagattttctca aatgctttatcaacatctaatgagatggtcatgtggtgtcttaaatgttt gggtatgttgtgataggtctgcctttatatgtttcttgacctttttccct tactgcttttaatattctttctttgttttgggcatttcttgtgttgatta ttatgtgacagccggattttcttttctggtccaatctatttggagttctg caggcttcttgtatgttcatggacatctctttctttaggttacggaaatt ttcttctataattttgttgaagttttatactggccttttatgttgggaat ctttactctcttctatacctattaaacttaggtttggtcttctcattgtg tcctagattcctgaatgttttggcttaggaagtttttgcattttgcattt tctttgactgttgggttaatgatttctatggtatattctacacatgagat tctctcttctttctcttgtattctgttttgtgatgattgcatctatgact cttgatctctttcctaggtttcctatctccagatttatcttcctttgtga tttgtttgttcatttctacttccatttttagatcctggatgattttgttc aatttctttcaactgtttggtcatggtttcctgtaaattctttaagggat ttttgtgtttcctctttatggacttttccctgtttacctgtgttctcctg tattctcttaagtgtgttatttatgtccttctaaagtcctcaatcagcat aatgagatgcgatttttaaatcaaatcatgcttttcctatgtgtttggaa tccaggacttgctgtgtagtgaactgggtttgaagatgctagttacctgg ttcttgttgaatggccttgtactgcctttcacctctgtattctcctgtga tgaggatgtgcgttcccgggc	gaattcttaaattgttttgatacttttatagctgatttacattattatat tcattgctgttaaaatcttaaatatttattcctgttgaaaaaccaagttt tactcatattttttaaaattactgttgaactgaaaaacattcagaaataa gagttacaattctgctaccgaattagaatccaggcatcagtgattgaaaa agaaaagacactactccaaactgaagataaaataattgttaatatcaaat accaaatagttaaaaccatatttgtagaatgtgaagtatagaatgaaaga aagaaaatgaatacttatgtttaatttttaaaagcctataacacatgaat gccaggaaaatatgagtaatttgagatacacacattcaaaaataagcaaa tgagccaagcaaggaacaactttactaaacactggactctagtaataggc aatacaattttctgtttcacacacgaggaactgtgttttaaccagttgtt tttataatgtacaaacaacatttgataacagtacaatattaatagaaatt aaaagacaaatcctatacaaaacaactcttccacttttacatagaaatta aaaactctcccagtaagcaaatctaggttaaaagaattaaacccacaaaa attctatttctgaaaaagagtattagtgaaaacactacttatgaaaactc atgagattcattagaataaaatttataggcacaaacatctacatcaataa aaataaaggaaagaaaataatgaattacatttctagctgctaaagaacat agaagaaagaaagaaagaaagaaagaaagaaagaaagaaggaagaaagaa agaagaaagaagatgaggagaattgaggaaacccaaagaaagcaaataaa gaaatattactgggtgcataccctagacaaatgaaatcaatatatgtagt tatatttggcattcccataagtattgcagcaatgacgcatataccagaac tttatacagccattacaaaggaagctgtggaacagggatatattaggtga aatagtcaacccgcataaatttggaatactgaattttcttactcacatgg tggggagcttaaaaacg
quality values	Open. Hide. 61 55 61 61 61 61 61 61 55 55 61 61 55 61 61 19 43 21 19 19 32 28 28 29 55 59 61 61 59 61 59 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 59 61 59 59 61 59 59 59 59 44 55 55 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 59 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 59 59 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 43 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 52 61 61 61 61 61 61 53 61 61 61 61 61 53 61 61 53 61 52 61 53 61 61 61 61 61 61 47 37 61 39 61 61 61 61 61 53 61 52 61 21 47 61 61 47 40 61 61 61 61 43 45 52 61 61 61 61 61 53 53 53 61 61 61 61 53 50 50 42 23 37 52 61 42 47 57 57 53 39 43 57 57 53 52 53 31 57 53 53 50 53 38 52 53 36 57 50 45 52 57 57 42 52 52 33 47 32 53 57 57 34 47 22 53 57 53 57 50 52 50 53 53 45 57 53 53 45 53 50 50 53 23 39 42 47 47 16 13 5 47 57 38 53 42 53 47 47 53 50 52 57 53 45 45 53 53 42 38 53 53 37 27 47 50 50 52 53 45 34 30 41 53 24 57 41 24 57 16 29 42 50 40 57 41 39 50 38 39 42 41 31 24 50 17 21 53 26 41 38 36 38 41 33 21 17 52 53 57 22 47 36 30 45 24 57 30 30 12 57 42 42 47 21 42 12 8 46 17 34 20 28 24 27 15 15 52 24 38 57 57 57 28 52 18 38 22 30 43 33 41 23 48 13 36 26 11 57 46 52 37 23 32 33 29 35 16 53 18 57 7 57 19 18 5 33 19 32 37 14 57 40 37 53 27 32 16 36 57 57 29 35 6 30 14 28 47 16 15 53 18 23 37 17 6 34 11 12 26 20 57 33 29 21 57 57 57 24 47 22 47 32 57 38 21 27 12 19 16 29 32 30 16 32 21 32 28 28 51 51 30 33 48 43 25 31 12 46 29 22 14 33 18 47 28 30 44 8 30 6 20 30 25 48 28 27 36 51 22 17 16 13 6 8 13 18 28 26 13 22 18 35 29 28 51 13 16 28 33 19 23 33 13 40 27 23 11 51 38 13 18 32 24 32 25 18 39 23 28 15 22 31 16 15 14 39 19 14 22 13 28 31 28 21 20 23 15 43 43 43 14 26 51 13 17 24 11 39 11 28 21 12 20 33 21 20 46 39 33 17 27 22 13 18 21 15 16 18 10 5 5 7 7 7 11 10 7 5 18 13 24 10 15 25 20 14 29 16 25 6 9 16 15 6 10 30 27 17 16 19 7 19 14 43 9 9 12 7 11 20 7 7 7 5 8 17 9 17 39 6 10 21 26 19 8 18 10 17 6 16 8 27 16 14 5 6 11 8 9 18 13 13 22 7 14 28 33 16 5 16 17 22 13 12 9 22 6 8 6 7 19 14 7 6 5 9 7 14 20 6 13 8 3 4 6 6 8 11 5 14 17 5 14 11 11 17 7 13 12 9 5 7 12 4 5	Open. Hide. 61 61 61 49 61 43 36 35 20 20 26 35 55 37 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 50 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 53 61 61 61 61 61 61 53 61 61 61 57 57 57 43 57 57 57 50 57 57 57 57 57 57 57 57 53 57 57 57 46 57 53 50 57 53 57 57 52 53 57 53 57 53 53 57 57 57 47 30 42 40 57 57 57 57 57 42 39 57 53 53 53 53 52 53 53 53 53 42 57 57 57 53 50 57 53 53 57 45 57 53 41 34 47 57 57 57 53 45 53 34 53 41 41 57 57 53 45 36 33 57 47 57 57 53 53 57 53 53 57 52 45 53 50 42 57 52 53 33 41 47 47 52 53 50 52 52 35 50 42 57 41 57 28 57 36 21 18 23 53 37 47 38 38 37 37 30 53 52 57 30 50 52 50 50 37 52 51 53 42 53 52 42 57 57 57 53 40 53 35 42 34 40 41 44 40 44 57 52 57 57 38 52 27 40 42 33 45 33 39 37 48 47 35 57 57 28 40 39 37 28 37 53 52 37 33 21 40 42 33 29 53 33 25 48 43 35 37 57 57 36 33 57 40 37 48 29 29 44 29 24 41 20 45 19 41 21 41 41 48 16 33 20 41 40 24 32 46 36 51 51 46 29 39 29 51 32 31 46 33 51 36 31 48 51 46 44 30 25 31 39 48 29 39 27 44 21 32 20 46 51 38 35 28 29 28 29 29 29 29 29 34 45 29 47 26 20 17 6 25 31 14 18 31 14 24 31 25 47 24 45 27 45 19 30 18 16 16 36 22 39 29 46 31 40 30 46 31 39 26 46 30 51 33 37 23 25 39 37 26 9 17 13 13 30 43 34 30 18 39 18 34 39 39 32 19 30 18 29 29 29 32 21 12 12 20 9 30 24 8 28 25 32 18 29 25 9 8 30 36 22 23 41 29 19 46 19 8 20 51 28 11 10 25 51 39 25 28 41 25 18 30 51 18 11 14 24 24 21 28 19 27 11 11 10 7 14 14 33 24 29 38 27 21 25 12 8 13 19 51 32 19 27 19 38 31 6 13 31 21 16 22 25 17 38 30 12 26 31 28 7 7 11 12 10 26 33 12 13 14 13 19 23 14 38 38 17 18 5 22 24 15 14 23 22 26 19 31 26 30 20 22 19 14 35 18 26 12 5 4 5 16 14 26 28 23 9 10 25 22 23 44 30 10 7 5 9 6 19 15 25 12 20 20 16 7 7 29 5 6 10 24 23 13 21 26 12 7 16 30 17 18 7 5 12 30 14 15 18 7 6 5 10 23 29 5 5 6 18 17 37 17 21 6 12 12 14 4 6 6 19 8 5 20 15 16 18 31 12 19 26 19 9 10 25 23 14 5 7 9 23 17 11 5 5 5 6 4 2 12 13 24 15 9 4 4 9 20 22 5 6 7 30 26 14 13 11 14 9 5 5 1 5 26 24 8 5

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_15274840_15275960
seq2: B6Ng01-128N12.g_68_1184

seq1  GAATTCTTAAATTGTTTTGATACTTTTATAGCTGATTTACATTATTATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAATTGTTTTGATACTTTTATAGCTGATTTACATTATTATAT  50

seq1  TCATTGCTGTTAAAATCTTAAATATTTATTCCTGTTGAAAAACCAAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGCTGTTAAAATCTTAAATATTTATTCCTGTTGAAAAACCAAGTTT  100

seq1  TACTCATATTTTTTAAAATTACTGTTGAACTGAAAAACATTCAGAAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATATTTTTTAAAATTACTGTTGAACTGAAAAACATTCAGAAATAA  150

seq1  GAGTTACAATTCTGCTACCGAATTAGAATCCAGGCATCAGTGATTGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTACAATTCTGCTACCGAATTAGAATCCAGGCATCAGTGATTGAAAA  200

seq1  AGAAAAGACACTACTCCAAACTGAAGATAAAATAATTGTTAATATCAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGACACTACTCCAAACTGAAGATAAAATAATTGTTAATATCAAAT  250

seq1  ACCAAATAGTTAAAACCATATTTGTAGAATGTGAAGTATAGAATGAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATAGTTAAAACCATATTTGTAGAATGTGAAGTATAGAATGAAAGA  300

seq1  AAGAAAATGAATACTTATGTTTAATTTTTAAAAGCCTATAACACATGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATGAATACTTATGTTTAATTTTTAAAAGCCTATAACACATGAAT  350

seq1  GCCAGGAAAATATGAGTAATTTGAGATACACACATTCAAAAATAAGCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGAAAATATGAGTAATTTGAGATACACACATTCAAAAATAAGCAAA  400

seq1  TGAGCCAAGCAAGGAACAACTTTACTAAACACTGGACTCTAGTAATAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCAAGCAAGGAACAACTTTACTAAACACTGGACTCTAGTAATAGGC  450

seq1  AATACAATTTTCTGTTTCACACACGAGGAACTGTGTTTTAACCAGTTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAATTTTCTGTTTCACACACGAGGAACTGTGTTTTAACCAGTTGTT  500

seq1  TTTATAATGTACAAACAACATTTGATAACAGTACAATATTAATAGAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATGTACAAACAACATTTGATAACAGTACAATATTAATAGAAATT  550

seq1  AAAAGACAAATCCTATACAAAACAACTCTTCCACTTTTACATAGAAATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACAAATCCTATACAAAACAACTCTTCCACTTTTACATAGAAATTA  600

seq1  AAAACTCTCCCAGTAAGCAAATCTAGGTTAAAAGAATTAAACCCACAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTCCCAGTAAGCAAATCTAGGTTAAAAGAATTAAACCCACAAAA  650

seq1  ATTCTATTTCTGAAAAAGAGTATTAGTGAAAACACTACTTATGAAAACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATTTCTGAAAAAGAGTATTAGTGAAAACACTACTTATGAAAACTC  700

seq1  ATGAGATTCATTAGAATAAAATTTATAGGCACAAACATCTACATCAATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATTCATTAGAATAAAATTTATAGGCACAAACATCTACATCAATAA  750

seq1  AAATAAAGGAAAGAAAATAATGAATTACATTTCTAGCTGCTAAAAGAACA  800
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAATAAAGGAAAGAAAATAATGAATTACATTTCTAGCTGCT-AAAGAACA  799

seq1  TAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  850
      ||   ||||||||||||||||||||||||||||||||||| ||| |||||
seq2  TA--GAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-AAGGAAGAA  846

seq1  AGAAAGAAAGAAAGATAGAAG-GAAGAATTGAGAAAACCCAAAGAAAGCA  899
      |||||| |||||||| ||| | | ||||||||| ||||||||||||||| 
seq2  AGAAAG-AAGAAAGA-AGATGAGGAGAATTGAGGAAACCCAAAGAAAGC-  893

seq1  AAATAAAGAAATATTACTGTGTGCATACCCTAGACAAATGAAATCAATAT  949
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAATAAAGAAATATTACTGGGTGCATACCCTAGACAAATGAAATCAATAT  943

seq1  ATTGTAGTTATATTT-GCATTCCCATAAGTATTGCAGCAATGAACGCATA  998
      | ||||||||||||| |||||||||||||||||||||||||| |||||||
seq2  A-TGTAGTTATATTTGGCATTCCCATAAGTATTGCAGCAATG-ACGCATA  991

seq1  TACCAGAACTTTATACAGCCATTACAAAAGAAAGCTGTGGAACA-GGATA  1047
      ||||||||||||||||||||||||| |||| ||||||||||||| |||||
seq2  TACCAGAACTTTATACAGCCATTAC-AAAGGAAGCTGTGGAACAGGGATA  1040

seq1  TATTAAGTGAAATTAGTC-ACACGCATAAATTT-GAATACTGAATATTCT  1095
      ||||| |||||| ||||| || ||||||||||| ||||||||||| ||||
seq2  TATTAGGTGAAA-TAGTCAACCCGCATAAATTTGGAATACTGAATTTTCT  1089

seq1  TACTCACATG--TGGGAGCTACAAAACG  1121
      ||||||||||   |||||||  ||||||
seq2  TACTCACATGGTGGGGAGCTTAAAAACG  1117

BAC Information

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BAC

BAC End Information

Alignment Information