BAC Information

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BAC

Clone NameB6Ng01-130F13
ChromosomeX (Build37)
Map Location 144,950,502 - 145,058,842
singlet/doubletdoublet
Overlap geneLOC100034729, LOC666861, EG666864
Upstream geneLrch2, LOC100039462, LOC666789, LOC434863, EG623995, EG624023, LOC666184, LOC100039511, LOC666812, LOC100039519, LOC434864, EG624096, LOC100039545, LOC666837, LOC100039553
Downstream geneLOC434866, EG666868, EG624260, LOC434865, EG624310, Ott, LOC666888, LOC100039598, LOC100039890, LOC100039612, EG666923, EG624378, LOC100039934, LOC100039629, LOC382243
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130F13.bB6Ng01-130F13.g
ACCDH931683DH931684
length1,093135
definitionDH931683|Mus musculus domesticus DNA, BAC clone: B6Ng01-130F13, 5' end.DH931684|Mus musculus domesticus DNA, BAC clone: B6Ng01-130F13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(145,057,740 - 145,058,842)(144,950,502 - 144,950,636)
sequence
gaattctcaaccttaaatgaaagttctctatcaaatccctcccttctttg
ctcaagaaaccccttagaagaggagggagaagatgtgggtaagccagagt
actggaggacatgagaacaaggccgtgtaaaacaatgggtctaaactctt
acacactcacagtgaaggaagtagtaagaaaagggcttgcacagctctgc
accaggtccttggaatatatattatagcttttagctttagaagtttatga
gacttctgagtgtgagaacaagtgtctttttttaggactcatttcctcct
gttgagttgccatgtccaaattcaatatgatcatttttgtttcttgaaaa
ttttattttgctacaaataaacttaaaatgctgaatttttatttatttat
ttatttatttatttatttgtttgtttgttgggaaggcatgtgcattccat
ggtgagtggtatgctttgagaggtcagaggacaacttgcaatcatcagta
tgatttcaatatgttggtccagtggattaaaatcaataagtcaggcttgg
tattggcaagcatctttatctcctgtgctgtttcattggctgaaattcct
tttctttttgttgttgtttgattgtttgctccttgttttttgagacatgg
tgtcagtgtgtgtacctcattgtcatggaactccctttgtagaccagatt
ggcattgaactcactgaaattcacttgcctctgcctctgcctcagcctgg
gaataaaggcatgggccaacatgacccacccaaatgcttgttttttgacg
tactgtttaaatgaatattaaagtaataaactgtcaagcgatgaaccaag
atctttattttatcttgtttgatagttttaaagatatatctgctttattt
tatagccctggatggatttgaaattatgacatcttgctgcctcagccttt
agagtgttggaatcaaaagctcccatagtctgtgaaattttattcctaag
tgaaatatatagacacagtttatggataatttcactttcatgtctttgga
gaattcagtagccaaattatgagtaaacccagaagtaatggaa
actctgtaggccagcctggctatgaattcaaagatatgcctgtctctacc
tcccatgtgcttgggttaaaggcatgtactaccactacagcttggtggta
tattgaggaaggaaggaaggaaggaaggagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_145057740_145058842
seq2: B6Ng01-130F13.b_47_1139 (reverse)

seq1  TTCCATTAC-TCTGTGGTTTACTCATATTTTTGGCTACTTAAATTCTCCA  49
      ||||||||| |||| ||||||||||||  ||||||||| | |||||||| 
seq2  TTCCATTACTTCTG-GGTTTACTCATA-ATTTGGCTAC-TGAATTCTCC-  46

seq1  AAAGACATTGAAAGTGATAATTTATCAATAAACTGTGTCTATATATTTCA  99
      ||||||| ||||||||  || ||||| |||||||||||||||||||||||
seq2  AAAGACA-TGAAAGTG--AAATTATCCATAAACTGTGTCTATATATTTCA  93

seq1  CTTAGGAATAAAATTTTCACAGACTATGGGAGCTTTTGATTCCAACACTC  149
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTTAGGAATAAAA-TTTCACAGACTATGGGAGCTTTTGATTCCAACACTC  142

seq1  TAAAGGCTGAGGCAGCAAGATTGTCATAATTTCAAATCCATCCAGGGCTA  199
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TAAAGGCTGAGGCAGCAAGA-TGTCATAATTTCAAATCCATCCAGGGCTA  191

seq1  TAAAAATAAAGCAGATATATCTTTAAAAACTATCAAACAAGATAAAATAA  249
      | |||||||||||||||||||||| |||||||||||||||||||||||||
seq2  T-AAAATAAAGCAGATATATCTTT-AAAACTATCAAACAAGATAAAATAA  239

seq1  AGATCTTGGTTCATCGCTTGACAGTTTATTACTTTAATATTCATTTAAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTGGTTCATCGCTTGACAGTTTATTACTTTAATATTCATTTAAAC  289

seq1  AGTACGTCAAAAAACAAGCATTTGGGTGGGTCATGTTGGCCCATGCCTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACGTCAAAAAACAAGCATTTGGGTGGGTCATGTTGGCCCATGCCTTT  339

seq1  ATTCCCAGGCTGAGGCAGAGGCAGAGGCAAGTGAATTTCAGTGAGTTCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAGGCTGAGGCAGAGGCAGAGGCAAGTGAATTTCAGTGAGTTCAA  389

seq1  TGCCAATCTGGTCTACAAAGGGAGTTCCATGACAATGAGGTACACACACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAATCTGGTCTACAAAGGGAGTTCCATGACAATGAGGTACACACACT  439

seq1  GACACCATGTCTCAAAAAACAAGGAGCAAACAATCAAACAACAACAAAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCATGTCTCAAAAAACAAGGAGCAAACAATCAAACAACAACAAAAA  489

seq1  GAAAAGGAATTTCAGCCAATGAAACAGCACAGGAGATAAAGATGCTTGCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGAATTTCAGCCAATGAAACAGCACAGGAGATAAAGATGCTTGCC  539

seq1  AATACCAAGCCTGACTTATTGATTTTAATCCACTGGACCAACATATTGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCAAGCCTGACTTATTGATTTTAATCCACTGGACCAACATATTGAA  589

seq1  ATCATACTGATGATTGCAAGTTGTCCTCTGACCTCTCAAAGCATACCACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATACTGATGATTGCAAGTTGTCCTCTGACCTCTCAAAGCATACCACT  639

seq1  CACCATGGAATGCACATGCCTTCCCAACAAACAAACAAATAAATAAATAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGGAATGCACATGCCTTCCCAACAAACAAACAAATAAATAAATAA  689

seq1  ATAAATAAATAAATAAAAATTCAGCATTTTAAGTTTATTTGTAGCAAAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATAAATAAAAATTCAGCATTTTAAGTTTATTTGTAGCAAAAT  739

seq1  AAAATTTTCAAGAAACAAAAATGATCATATTGAATTTGGACATGGCAACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTCAAGAAACAAAAATGATCATATTGAATTTGGACATGGCAACT  789

seq1  CAACAGGAGGAAATGAGTCCTAAAAAAAGACACTTGTTCTCACACTCAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGAGGAAATGAGTCCTAAAAAAAGACACTTGTTCTCACACTCAGA  839

seq1  AGTCTCATAAACTTCTAAAGCTAAAAGCTATAATATATATTCCAAGGACC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCATAAACTTCTAAAGCTAAAAGCTATAATATATATTCCAAGGACC  889

seq1  TGGTGCAGAGCTGTGCAAGCCCTTTTCTTACTACTTCCTTCACTGTGAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCAGAGCTGTGCAAGCCCTTTTCTTACTACTTCCTTCACTGTGAGT  939

seq1  GTGTAAGAGTTTAGACCCATTGTTTTACACGGCCTTGTTCTCATGTCCTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAGAGTTTAGACCCATTGTTTTACACGGCCTTGTTCTCATGTCCTC  989

seq1  CAGTACTCTGGCTTACCCACATCTTCTCCCTCCTCTTCTAAGGGGTTTCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACTCTGGCTTACCCACATCTTCTCCCTCCTCTTCTAAGGGGTTTCT  1039

seq1  TGAGCAAAGAAGGGAGGGATTTGATAGAGAACTTTCATTTAAGGTTGAGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAAAGAAGGGAGGGATTTGATAGAGAACTTTCATTTAAGGTTGAGA  1089

seq1  ATTC  1103
      ||||
seq2  ATTC  1093

seq1: chrX_144950502_144950636
seq2: B6Ng01-130F13.g_74_208

seq1  ACTCTGTAGGCCAGCCTGGCTATGAATTCAAAGATATGCCTGTCTCTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTAGGCCAGCCTGGCTATGAATTCAAAGATATGCCTGTCTCTACC  50

seq1  TCCCATGTGCTTGGGTTAAAGGCATGTACTACCACTACAGCTTGGTGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGTGCTTGGGTTAAAGGCATGTACTACCACTACAGCTTGGTGGTA  100

seq1  TATTGAGGAAGGAAGGAAGGAAGGAAGGAGGGAGG  135
      |||||||||||||||||||||||||||||||||||
seq2  TATTGAGGAAGGAAGGAAGGAAGGAAGGAGGGAGG  135