BAC Information

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BAC

Clone NameB6Ng01-134D16
ChromosomeX (Build37)
Map Location 160,372,373 - 160,510,219
singlet/doubletdoublet
Overlap geneZrsr2, Car5b, Siah1b
Upstream geneCtps2, S100g, LOC100040610, EG637051, Grpr, 1700045I19Rik, Ap1s2
Downstream geneTmem27, Ace2, Bmx, Pir, Figf, Piga, Asb11, Asb9, Mospd2, Fancb, LOC627045
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134D16.bB6Ng01-134D16.g
ACCDH934580DH934581
length1,1561,159
definitionDH934580|Mus musculus domesticus DNA, BAC clone: B6Ng01-134D16, 5' end.DH934581|Mus musculus domesticus DNA, BAC clone: B6Ng01-134D16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(160,372,373 - 160,373,554)(160,509,053 - 160,510,219)
sequence
gaattctcagcgttaggactgggtatgtaactcagtgggagcagccttgc
ctaccatgtttgaagcttcagcaccacacatacaaaattatcttgacata
atcttagctgcagtttgaacagtattttaaaaataccaaacgtacttaaa
gccatacagtattaataaacccaataaatctagaaacctaccattttggg
gatgaagcaggcatttagaattggaacaagttggattttgttaaactttg
agcactttgtacctgttttggttgttttttttttcctctttttaaaaagg
aggcagggtcgcctcccaagtgcagggagtattggcataagctactgcac
atgacttgtatgcatctttactgaattcccaaatgtcagattgctaagtg
ccatgtgacagtgagcttggaggcccaaagcctgacaatgaacgtctgcg
aagaaagcgtctcaggaaagctgggataatggccacgagccgagccggta
gcgaccacattcactgatgatcactcttgtgctggttacatacacaagga
ctgggtttaacactggatgtactcaacactgacaactctaatttcctggg
aaatgacaaaatcctttacctctttataaaaaactttcacaacacactat
tcaagatataccctggcagcccccaggggaaggaggaactctaagagatg
gggaaagagaagtatggaaatggtacttcaaaattttgaaatgggatgtt
ttagagaaaaaaaaatctacttttacatatagaaaaataaaatagaatat
tttaaaagaaatggccagaaagtagaaaaaattagtgataataaaaacct
tcacttcaatacctaaaccctgccaaagtagcaaagctgaaaattctaat
tctgtgctgtgagtgctaaaaggttagagtgatgcttggagtcttcctgg
gaggaaacctggattacctttcttgatatagtttactctagaaataggag
ggccactttaatcacatagatgtgtcagtctattggcagatatactctat
gtagtgagtaaaataagattattggacttgagcatcgatgatgaaatgag
aacaatggattaaaacattcagcatatgctttgaattaaaatagtgtgta
gctgca
gaattctgatggaggatggagtgctctttcattaaccttccaataactgg
tgttctctagggtggcggcccagggtgtcccataggtctccgtgcgacta
ggaggggcagcggtggcggcggtggcagcggcagcagcggcagcggcggc
agcggcagcagcagcagctagcaacctggtcagggtacgctctccatcca
cagagatgagccgtcaggctgctacagcattatccactggcacctcaaag
tgtccaccatcccagagggtacctgccttgactgacacaactgcatccaa
caatgacttggcgagtctttttgagtgtcctgtctgctttgactatgtgt
tgccacctattcttcagtgtcagagtggccatcttgtttgtagcaactgt
cgccccaaacttacatgttgtcccacctgccggggcccattgggatccat
tcgcaacttggctatggagaaagtggccaactcagtactcttcccctgta
aatattccgcttctggatgtgaaataactctgccacacaccaaaaaggca
gagcacgaggagctgtgtgagttcaggccttactcctgcccctgccctgg
tgcttcctgtaaatggcaaggctccttggatgctgtcatgccccacctga
tgcatcagcacaagtccattaccaccctgcaaggagaagacatagttttc
cttgctacagacatcaaccttcctggtgctgttgactgggtgatgatgca
gtcttgttttggctttcatttcatgttagtcttggagaaacaggaaaaat
atgatggtcatcagcagttctttgcaattgtacaactgataggaacacgc
aaacaagctgaaaattttgcctatcgacttgagctaaatggtcataggcg
ccgattaacttgggaagcgactctcgatctattcatgaggggattgcaca
gccattatgaatagtgattgcctagtgttgacccagcattgcacagcttt
ttgcagaaaatggtaatctaggcatcatgtaactattttccatgtgtgga
acgggcatcaaatatttctgggccaggttttaaatttggcattggactca
cgagaatagccacccaatctgctgcctaccttaacattctgggtaggtga
agcctagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_160372373_160373554
seq2: B6Ng01-134D16.b_44_1199

seq1  GAATTCTCAGCGTTAGGACTGGGTATGTAACTCAGTGGGAGCAGCCTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCGTTAGGACTGGGTATGTAACTCAGTGGGAGCAGCCTTGC  50

seq1  CTACCATGTTTGAAGCTTCAGCACCACACATACAAAATTATCTTGACATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCATGTTTGAAGCTTCAGCACCACACATACAAAATTATCTTGACATA  100

seq1  ATCTTAGCTGCAGTTTGAACAGTATTTTAAAAATACCAAACGTACTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGCTGCAGTTTGAACAGTATTTTAAAAATACCAAACGTACTTAAA  150

seq1  GCCATACAGTATTAATAAACCCAATAAATCTAGAAACCTACCATTTTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATACAGTATTAATAAACCCAATAAATCTAGAAACCTACCATTTTGGG  200

seq1  GATGAAGCAGGCATTTAGAATTGGAACAAGTTGGATTTTGTTAAACTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGCAGGCATTTAGAATTGGAACAAGTTGGATTTTGTTAAACTTTG  250

seq1  AGCACTTTGTACCTGTTTTGGTTGTTTTTTTTTTCCTCTTTTTAAAAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTTGTACCTGTTTTGGTTGTTTTTTTTTTCCTCTTTTTAAAAAGG  300

seq1  AGGCAGGGTCGCCTCCCAAGTGCAGGGAGTATTGGCATAAGCTACTGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGGTCGCCTCCCAAGTGCAGGGAGTATTGGCATAAGCTACTGCAC  350

seq1  ATGACTTGTATGCATCTTTACTGAATTCCCAAATGTCAGATTGCTAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTGTATGCATCTTTACTGAATTCCCAAATGTCAGATTGCTAAGTG  400

seq1  CCATGTGACAGTGAGCTTGGAGGCCCAAAGCCTGACAATGAACGTCTGCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGACAGTGAGCTTGGAGGCCCAAAGCCTGACAATGAACGTCTGCG  450

seq1  AAGAAAGCGTCTCAGGAAAGCTGGGATAATGGCCACGAGCCGAGCCGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGCGTCTCAGGAAAGCTGGGATAATGGCCACGAGCCGAGCCGGTA  500

seq1  GCGACCACATTCACTGATGATCACTCTTGTGCTGGTTACATACACAAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACCACATTCACTGATGATCACTCTTGTGCTGGTTACATACACAAGGA  550

seq1  CTGGGTTTAACACTGGATGTACTCAACACTGACAACTCTAATTTCCTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTTAACACTGGATGTACTCAACACTGACAACTCTAATTTCCTGGG  600

seq1  AAATGACAAAATCCTTTACCTCTTTATAAAAAACTTTCACAACACACTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACAAAATCCTTTACCTCTTTATAAAAAACTTTCACAACACACTAT  650

seq1  TCAAGATATACCCTGGCAGCCCCCAGGGGAAGGAGGAACTCTAAGAGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATATACCCTGGCAGCCCCCAGGGGAAGGAGGAACTCTAAGAGATG  700

seq1  GGGAAAGAGAAGTATGGAAATGGTACTTCAAAATTTTGAAATGGGATGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGAGAAGTATGGAAATGGTACTTCAAAATTTTGAAATGGGATGTT  750

seq1  TTAGAGAAAAAAAAATCTACTTTTACATATAGAAAAATAAAATAGAATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGAAAAAAAAATCTACTTTTACATATAGAAAAATAAAATAGAATAT  800

seq1  TTTAAAAGAAATGGCCAGAAAGTAGAAAAAATTAGTGATAATAAAAACCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGAAATGGCCAGAAAGTAGAAAAAATTAGTGATAATAAAAACCT  850

seq1  TCACTTCAATACCTAAACCCTGCCAAAGTAGCAAAGCTGAAAATTCTAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCAATACCTAAACCCTGCCAAAGTAGCAAAGCTGAAAATTCTAAT  900

seq1  TCTGTGCTGTGAGTGCTAAAAGGTTAGAGTGATGCTTGGAGTCTTCCTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCTGTGAGTGCTAAAAGGTTAGAGTGATGCTTGGAGTCTTCCTGG  950

seq1  GAGGAAACCTGGATTACCTTTCTTGATATAGTTTACTCTAAGAAATAAGA  1000
      ||||||||||||||||||||||||||||||||||||||| ||||||| ||
seq2  GAGGAAACCTGGATTACCTTTCTTGATATAGTTTACTCT-AGAAATAGGA  999

seq1  GGGCCACCTTTAAAATCCAACAATAGGAATGTTGTCAAGTCTATTGGCAG  1050
      ||||||| ||   ||||  || ||||  ||| |||| |||||||||||||
seq2  GGGCCACTTT---AATC--AC-ATAG--ATG-TGTC-AGTCTATTGGCAG  1039

seq1  ATATACTCTATGTAGTGAGTAAAAATAAGAATTATGGGACTTGAGCATCA  1100
      |||||||||||||||||||| |||||||| ||||| ||||||||||||| 
seq2  ATATACTCTATGTAGTGAGT-AAAATAAG-ATTATTGGACTTGAGCATC-  1086

seq1  GATTGATGAAATGAG-ACAATTGAGTGAAAACCATCAAAGCAATATGGCC  1149
      || |||||||||||| ||||| || | |||||  ||  ||| |||||  |
seq2  GA-TGATGAAATGAGAACAATGGA-TTAAAACATTC--AGC-ATATG--C  1129

seq1  TTTGAATTAAAAAATAAAGTGTGTAGGGCTGCA  1182
      |||||||||||    | ||||||||  ||||||
seq2  TTTGAATTAAA----ATAGTGTGTA--GCTGCA  1156

seq1: chrX_160509053_160510219
seq2: B6Ng01-134D16.g_67_1225 (reverse)

seq1  GTCTA-GCTTCTACCTACCAGGAATGTTTTAGGTTGGCAGGCAGA-TGGG  48
      ||||| ||||| |||||||  ||||| || |||| |||| ||||| ||||
seq2  GTCTAGGCTTC-ACCTACCCAGAATG-TTAAGGTAGGCA-GCAGATTGGG  47

seq1  TGGCTTATTCTCTGTGAAGTCAAATGCAAATTTTAAACACTGG-CCAGAA  97
      |||| ||||||| ||| |||| ||||| || ||||||  |||| ||||||
seq2  TGGC-TATTCTC-GTG-AGTCCAATGCCAAATTTAAAACCTGGCCCAGAA  94

seq1  ATATTTGATTGCCGTTTCAACACATGG-AAATAGTTACATTGATGCCTAG  146
      |||||||| ||||  ||| |||||||| ||||||||||| ||||||||||
seq2  ATATTTGA-TGCCCGTTCCACACATGGAAAATAGTTACA-TGATGCCTAG  142

seq1  ATTACCATTTTCTGCAAAAAGCTGTGCAATGCTGGTGTCAAACACTAGGC  196
      ||||||||||||||||||||||||||||||||||| ||| ||||||||||
seq2  ATTACCATTTTCTGCAAAAAGCTGTGCAATGCTGG-GTC-AACACTAGGC  190

seq1  AATCACTATTCATAATGGCTGTTGCAATCCCCTCATGAATAGATCGAGGA  246
      ||||||||||||||||||||| ||||||||||||||||||||||||| ||
seq2  AATCACTATTCATAATGGCTG-TGCAATCCCCTCATGAATAGATCGA-GA  238

seq1  GTCGCTTCCCAAGTTAATCGGCGCCTATGACCATTTAGCTCAAGTCGATA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGCTTCCCAAGTTAATCGGCGCCTATGACCATTTAGCTCAAGTCGATA  288

seq1  GGCAAAATTTTCAGCTTGTTTGCGTGTTCCTATCAGTTGTACAATTGCAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAATTTTCAGCTTGTTTGCGTGTTCCTATCAGTTGTACAATTGCAA  338

seq1  AGAACTGCTGATGACCATCATATTTTTCCTGTTTCTCCAAGACTAACATG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGCTGATGACCATCATATTTTTCCTGTTTCTCCAAGACTAACATG  388

seq1  AAATGAAAGCCAAAACAAGACTGCATCATCACCCAGTCAACAGCACCAGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAAGCCAAAACAAGACTGCATCATCACCCAGTCAACAGCACCAGG  438

seq1  AAGGTTGATGTCTGTAGCAAGGAAAACTATGTCTTCTCCTTGCAGGGTGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTGATGTCTGTAGCAAGGAAAACTATGTCTTCTCCTTGCAGGGTGG  488

seq1  TAATGGACTTGTGCTGATGCATCAGGTGGGGCATGACAGCATCCAAGGAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGACTTGTGCTGATGCATCAGGTGGGGCATGACAGCATCCAAGGAG  538

seq1  CCTTGCCATTTACAGGAAGCACCAGGGCAGGGGCAGGAGTAAGGCCTGAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCCATTTACAGGAAGCACCAGGGCAGGGGCAGGAGTAAGGCCTGAA  588

seq1  CTCACACAGCTCCTCGTGCTCTGCCTTTTTGGTGTGTGGCAGAGTTATTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACACAGCTCCTCGTGCTCTGCCTTTTTGGTGTGTGGCAGAGTTATTT  638

seq1  CACATCCAGAAGCGGAATATTTACAGGGGAAGAGTACTGAGTTGGCCACT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCCAGAAGCGGAATATTTACAGGGGAAGAGTACTGAGTTGGCCACT  688

seq1  TTCTCCATAGCCAAGTTGCGAATGGATCCCAATGGGCCCCGGCAGGTGGG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCATAGCCAAGTTGCGAATGGATCCCAATGGGCCCCGGCAGGTGGG  738

seq1  ACAACATGTAAGTTTGGGGCGACAGTTGCTACAAACAAGATGGCCACTCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATGTAAGTTTGGGGCGACAGTTGCTACAAACAAGATGGCCACTCT  788

seq1  GACACTGAAGAATAGGTGGCAACACATAGTCAAAGCAGACAGGACACTCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGAAGAATAGGTGGCAACACATAGTCAAAGCAGACAGGACACTCA  838

seq1  AAAAGACTCGCCAAGTCATTGTTGGATGCAGTTGTGTCAGTCAAGGCAGG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACTCGCCAAGTCATTGTTGGATGCAGTTGTGTCAGTCAAGGCAGG  888

seq1  TACCCTCTGGGATGGTGGACACTTTGAGGTGCCAGTGGATAATGCTGTAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTCTGGGATGGTGGACACTTTGAGGTGCCAGTGGATAATGCTGTAG  938

seq1  CAGCCTGACGGCTCATCTCTGTGGATGGAGAGCGTACCCTGACCAGGTTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGACGGCTCATCTCTGTGGATGGAGAGCGTACCCTGACCAGGTTG  988

seq1  CTAGCTGCTGCTGCTGCCGCTGCCGCCGCTGCCGCTGCTGCCGCTGCCAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTGCTGCTGCTGCCGCTGCCGCCGCTGCCGCTGCTGCCGCTGCCAC  1038

seq1  CGCCGCCACCGCTGCCCCTCCTAGTCGCACGGAGACCTATGGGACACCCT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCGCCACCGCTGCCCCTCCTAGTCGCACGGAGACCTATGGGACACCCT  1088

seq1  GGGCCGCCACCCTAGAGAACACCAGTTATTGGAAGGTTAATGAAAGAGCA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCGCCACCCTAGAGAACACCAGTTATTGGAAGGTTAATGAAAGAGCA  1138

seq1  CTCCATCCTCCATCAGAATTC  1167
      |||||||||||||||||||||
seq2  CTCCATCCTCCATCAGAATTC  1159