BAC Information

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BAC

Clone NameB6Ng01-135F15
ChromosomeX (Build37)
Map Location 81,414,543 - 81,415,484
singlet/doubletsinglet
Overlap geneDmd
Upstream geneTsga8
Downstream geneLOC100042306, LOC100042296
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135F15.bB6Ng01-135F15.g
ACCDH935410DH935411
length1,219937
definitionDH935410|Mus musculus domesticus DNA, BAC clone: B6Ng01-135F15, 5' end.DH935411|Mus musculus domesticus DNA, BAC clone: B6Ng01-135F15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagcaccaatttttaatagagttatttgatt
ttctggactccacctacttgagttctttgtatataatggatattaatccc
ctatgggatttagtattggtaaagatcctttcccaatctgttggcgatct
ttttgtcttattgacagtgtcttttgccttacagaagctttgtaatttta
tgaggtcccatttgtcaatacttgatcttacagcacaagccattgctatt
cggttcaggaattatttccccagtacccatatcttcgaggcttttcccca
ctttgtcctctataaattttagtgtctctggttttatgtggctttccttg
atccacttagacatgagctatgtataaggagattagaatggaccaatacg
aattcgtcgacatgataaccccaattgtgccagcaccaattgttgaaaat
gctgtcttttttttttttttttaaatccactggatggttttaactccctt
gtcaaagatcaagtgaccataggtgtgtgggttcatttcggggtcttcaa
ttctattccactgatatactgtctgttgctgtaccagtaccatgcagttt
taaatcacaattgatctatagtacagcttgaggtcaggcatggtgattcc
actaacattcttttattgttgagaatagtttttgcaattctaggtttttt
gttattccagatgaatttgcaaattgctctttctaactctgtgaagaatt
gatttggaattttgatgtggattgcattgaatcggtatattgcttttggc
aagatagccatttttactatattaatcctgccaatccatgagcatgggag
atctttccatcttctgagatcttcttcaatttcattcttcagagacttga
agttcttatcatacagatctttcacttccttggttagagtcacaccaagg
tattttgtattatttgtgactatgtgaaggtgtgtttccctaattctttc
tcagtcttttgtcttttgtgtagaagaagaccactgattgtttgagtaat
ttatatccagctcctcatgaagctgttatcagataggagtcttgggaatt
taaagtcctaatatcatcgatgcaatagaattggactctccttcaatgga
tccttgaatccttgtcattgctggcaacggaatatcgtgtcactcctggg
gaatgcttcctttgcctga
gaattcaacttggaatggaaaatggcatttttttcttagttgtagataca
atattgataatactttagtaaaaatgccgatataatgagttttctttcta
aacttcaagtgtctccatgtgcagaaccatactcaactaactgttgatca
ctaaagcccaccaccttccattttccagttcatctaagcaacagttattg
agctgctgaactgatagaggtaaagagatgtgaaaaggctcactgatgtc
tgatatgaatcacttctgcttctgtatgatcgtgaataaggatcagttct
agaaattggagactgggaaggataatgaattttaggtgttttgctgtacc
ttgggccctggaagccttttcttgttagccttgtcaaaacacttttattt
actactaacatatttactattagacatccctctcttgcttgcttttcttg
tactttttccacactcatgattgcaaacaggtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtttatttcaaatctgaattatctctcatttatagttccctc
cttcttctttagttagctctcatcttcatggctttaatgtctttgtaaag
cttctgattttcttagttctgtgtttgaaagcatgtaaggcctcttgttt
acttttgtcttgaaaaatagaacatggtacttccttgtttcttttttttt
tgtcttgaaattttctatcaaaaagtctttctttgtacagtagttatagt
tctagagtttcaaaatccatgtgaggtatttaaatgctgtatttaccttt
ctcatatataaaaatatattttgcaatagttcttgaaaagccatcctcct
ctgccaacatggcacactaggcccttagactacacacacacttttttttt
cattgatttgaaaactttgcccattacagggaatgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_81414543_81415484
seq2: B6Ng01-135F15.g_70_1005

seq1  GAATTCAACTTGGAATGGAAAATGGCATTTTTTTCTTAGTTGTAGATACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTGGAATGGAAAATGGCATTTTTTTCTTAGTTGTAGATACA  50

seq1  ATATTGATAATACTTTAGTAAAAATGCCGATATAATGAGTTTTCTTTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGATAATACTTTAGTAAAAATGCCGATATAATGAGTTTTCTTTCTA  100

seq1  AACTTCAAGTGTCTCCATGTGCAGAACCATACTCAACTAACTGTTGATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCAAGTGTCTCCATGTGCAGAACCATACTCAACTAACTGTTGATCA  150

seq1  CTAAAGCCCACCACCTTCCATTTTCCAGTTCATCTAAGCAACAGTTATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGCCCACCACCTTCCATTTTCCAGTTCATCTAAGCAACAGTTATTG  200

seq1  AGCTGCTGAACTGATAGAGGTAAAGAGATGTGAAAAGGCTCACTGATGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTGAACTGATAGAGGTAAAGAGATGTGAAAAGGCTCACTGATGTC  250

seq1  TGATATGAATCACTTCTGCTTCTGTATGATCGTGAATAAGGATCAGTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGAATCACTTCTGCTTCTGTATGATCGTGAATAAGGATCAGTTCT  300

seq1  AGAAATTGGAGACTGGGAAGGATAATGAATTTTAGGTGTTTTGCTGTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTGGAGACTGGGAAGGATAATGAATTTTAGGTGTTTTGCTGTACC  350

seq1  TTGGGCCCTGGAAGCCTTTTCTTGTTAGCCTTGTCAAAACACTTTTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCCCTGGAAGCCTTTTCTTGTTAGCCTTGTCAAAACACTTTTATTT  400

seq1  ACTACTAACATATTTACTATTAGACATCCCTCTCTTGCTTGCTTTTCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTAACATATTTACTATTAGACATCCCTCTCTTGCTTGCTTTTCTTG  450

seq1  TACTTTTTCCACACTCATGATTGCAAACAGGTGTGTGTGTGTGTGTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTCCACACTCATGATTGCAAACAGGTGTGTGTGTGTGTGTGTGT  500

seq1  GTGTGTGTGTTTATTTCAAATCTGAATTATCTCTCATTTATAGTTCCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTTTATTTCAAATCTGAATTATCTCTCATTTATAGTTCCCTC  550

seq1  CTTCTTCTTTAGTTAGCTCTCATCTTCATGGCTTTAATGTCTTTGTAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTTTAGTTAGCTCTCATCTTCATGGCTTTAATGTCTTTGTAAAG  600

seq1  CTTCTGATTTTCTTAGTTCTGTGTTTGAAAGCATGTAAGGCCTCTTGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATTTTCTTAGTTCTGTGTTTGAAAGCATGTAAGGCCTCTTGTTT  650

seq1  ACTTTTGTCTTGAAAAATAGAACATGGTACTTCCTTG-TTCTTTTTTTTT  699
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACTTTTGTCTTGAAAAATAGAACATGGTACTTCCTTGTTTCTTTTTTTTT  700

seq1  TGTCTTGAAAATTTTCTATCAAAAAGTCTTTCTTTGTTACAGTAGTTATA  749
      ||||||| |||||||||||||||||||||||||||| |||||||||||||
seq2  TGTCTTG-AAATTTTCTATCAAAAAGTCTTTCTTTG-TACAGTAGTTATA  748

seq1  GTTCTAGAGTTTCAAAATCCATGTGAGGTATTTAAATGCTGTATTTACCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAGAGTTTCAAAATCCATGTGAGGTATTTAAATGCTGTATTTACCT  798

seq1  TTCTCATATATAAAAAATATATTTTGCAATAGTTCTTGAAAAGCCATCCT  849
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATATAT-AAAAATATATTTTGCAATAGTTCTTGAAAAGCCATCCT  847

seq1  CCTCTGCCAACATGGCAACACTAGGCCCTTAGACTACACACACACATTTT  899
      |||||||||||||||| |||||||||||||||||||||||||||| ||||
seq2  CCTCTGCCAACATGGC-ACACTAGGCCCTTAGACTACACACACAC-TTTT  895

seq1  TTTTTCATTGATTTGAAAACTTTGCCCCAGTACAGGGGAATGC  942
      |||||||||||||||||||||||| |||| |||| ||||||||
seq2  TTTTTCATTGATTTGAAAACTTTG-CCCATTACA-GGGAATGC  936